RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 SKOR1P84550 965 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 ZNF177Q13360 481 aaPredicted RBP18.12■□□□□ 0.49
SCARB2-223ENST00000640640 CELF6Q96J87 481 aaKnown RBP18.12■□□□□ 0.49
SCARB2-223ENST00000640640 TTYH3Q9C0H2 523 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 C10orf88Q9H8K7 445 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 DDX20Q9UHI6 824 aaKnown RBP18.12■□□□□ 0.49
SCARB2-223ENST00000640640 CNTNAP2Q9UHC6 1331 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 A0A0B4J269 797 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 SUPT3HB4E1H0 165 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 ZBTB22O15209 634 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 SUPT3HO75486 399 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 UBOX5O94941 541 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 CCDC130P13994 396 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 AKT1P31749 480 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 CCR1P32246 355 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 RGS4P49798 205 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 RAB27AP51159 221 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 ABCE1P61221 599 aaKnown RBP18.12■□□□□ 0.49
SCARB2-223ENST00000640640 RPL10AP62906 217 aaKnown RBP18.12■□□□□ 0.49
SCARB2-223ENST00000640640 TREML2Q5T2D2 321 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 SETD3Q86TU7 594 aaPredicted RBP18.12■□□□□ 0.49
SCARB2-223ENST00000640640 UNC93AQ86WB7 457 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 MREGQ8N565 214 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 TSC22D3Q99576 134 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 LRRC19Q9H756 370 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 AURKCQ9UQB9 309 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 RHOBTB1O94844 696 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 TMCC1O94876 653 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 IL10P22301 178 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 RBL1P28749 1068 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 HNRNPH1P31943 449 aaKnown RBP18.12■□□□□ 0.49
SCARB2-223ENST00000640640 NR2C2P49116 596 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 TTMPQ5BVD1 217 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 ZRANB3Q5FWF4 1079 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 AGAP9Q5VTM2 703 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 ZNF280DQ6N043 979 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 PCYOX1LQ8NBM8 494 aa18.12■□□□□ 0.49
SCARB2-223ENST00000640640 RBM22Q9NW64 420 aaKnown RBP eCLIP18.12■□□□□ 0.49
SCARB2-223ENST00000640640 SLC12A8A0AV02 714 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 OPLAHO14841 1288 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 SYF2O95926 243 aaKnown RBP18.11■□□□□ 0.49
SCARB2-223ENST00000640640 STMN1P16949 149 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 LBX2Q6XYB7 198 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 IFNEQ86WN2 208 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 STARD7Q9NQZ5 370 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 DYRK4Q9NR20 520 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 VANGL2Q9ULK5 521 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 SPEF2Q9C093 1822 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 GLRBP48167 497 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 PKN2Q16513 984 aaKnown RBP18.11■□□□□ 0.49
SCARB2-223ENST00000640640 ARRDC4Q8NCT1 418 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 SOCS4Q8WXH5 440 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 SMARCD1Q96GM5 515 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 MYO1DO94832 1006 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 POTEAQ6S8J7 498 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 SLC51AQ86UW1 340 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 TCP10LQ8TDR4 215 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 NOD2Q9HC29 1040 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 CD274Q9NZQ7 290 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 PCDHB8Q9UN66 801 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 TMEM247A6NEH6 219 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 BGNP21810 368 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 NUMBP49757 651 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 COPAP53621 1224 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 CDH18Q13634 790 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 DPYSL3Q14195 570 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 DAB2IPQ5VWQ8 1189 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 DUPD1Q68J44 220 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 SENP8Q96LD8 212 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 UBE2OQ9C0C9 1292 aaKnown RBP18.11■□□□□ 0.49
SCARB2-223ENST00000640640 PKP3Q9Y446 797 aa18.11■□□□□ 0.49
SCARB2-223ENST00000640640 COL14A1Q05707 1796 aaKnown RBP18.11■□□□□ 0.49
SCARB2-223ENST00000640640 H0Y626 953 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 H7C4K7 107 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 SUPT7LO94864 414 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 ATXN8OSP0DMR3 200 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 C16orf89Q6UX73 402 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 SZRD1Q7Z422 152 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 UNC45BQ8IWX7 931 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 PPP1R13LQ8WUF5 828 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 ACOT9Q9Y305 439 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 RALBP11234 206 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 NQO1P15559 274 aaKnown RBP18.1■□□□□ 0.49
SCARB2-223ENST00000640640 AVPR1AP37288 418 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 BFSP2Q13515 415 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 ZBTB41Q5SVQ8 909 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 MFN1Q8IWA4 741 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 DMAP1Q9NPF5 467 aaPredicted RBP18.1■□□□□ 0.49
SCARB2-223ENST00000640640 CASS4Q9NQ75 786 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 XPNPEP3Q9NQH7 507 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 SLC13A4Q9UKG4 626 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 FSCN2O14926 492 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 HOXA2O43364 376 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 AQP5P55064 265 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 PBXIP1Q96AQ6 731 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 PCDHB18PQ96TA0 734 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 FICDQ9BVA6 458 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 RRAGCQ9HB90 399 aa18.1■□□□□ 0.49
SCARB2-223ENST00000640640 PIH1D1Q9NWS0 290 aaKnown RBP18.1■□□□□ 0.49
SCARB2-223ENST00000640640 RNF103O00237 685 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms