RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	PEBP4	Q96S96	227 aa		18.53	■□□□□ 0.56
SPIN3-238	ENST00000640421	NAPG	Q99747	312 aa	Predicted RBP	18.53	■□□□□ 0.56
SPIN3-238	ENST00000640421	IGFLR1	Q9H665	355 aa		18.53	■□□□□ 0.56
SPIN3-238	ENST00000640421	CCSER2	Q9H7U1	834 aa		18.53	■□□□□ 0.56
SPIN3-238	ENST00000640421	AMFR	Q9UKV5	643 aa		18.53	■□□□□ 0.56
SPIN3-238	ENST00000640421	SYNJ2BP-COX16	A0A087WUM0	186 aa		18.52	■□□□□ 0.56
SPIN3-238	ENST00000640421	ZNF840P	A6NDX5	716 aa		18.52	■□□□□ 0.56
SPIN3-238	ENST00000640421		M0QYT0	321 aa		18.52	■□□□□ 0.56
SPIN3-238	ENST00000640421	KIF2A	O00139	706 aa	Predicted RBP	18.52	■□□□□ 0.56
SPIN3-238	ENST00000640421	DDX3Y	O15523	660 aa	Known RBP	18.52	■□□□□ 0.56
SPIN3-238	ENST00000640421	LINC01565	O15544	149 aa		18.52	■□□□□ 0.56
SPIN3-238	ENST00000640421	F11	P03951	625 aa		18.52	■□□□□ 0.56
SPIN3-238	ENST00000640421	RARG	P13631	454 aa		18.52	■□□□□ 0.56
SPIN3-238	ENST00000640421	MIP	P30301	263 aa		18.52	■□□□□ 0.56
SPIN3-238	ENST00000640421	CASQ1	P31415	396 aa		18.52	■□□□□ 0.56
SPIN3-238	ENST00000640421	ADGRE1	Q14246	886 aa		18.52	■□□□□ 0.56
SPIN3-238	ENST00000640421	GAREM2	Q75VX8	874 aa		18.52	■□□□□ 0.56
SPIN3-238	ENST00000640421	RTL10	Q7L3V2	364 aa		18.52	■□□□□ 0.56
SPIN3-238	ENST00000640421	ARHGAP18	Q8N392	663 aa		18.52	■□□□□ 0.56
SPIN3-238	ENST00000640421	HDAC7	Q8WUI4	952 aa		18.52	■□□□□ 0.56
SPIN3-238	ENST00000640421	ALG3	Q92685	438 aa		18.52	■□□□□ 0.56
SPIN3-238	ENST00000640421	ZNF707	Q96C28	371 aa	Predicted RBP	18.52	■□□□□ 0.56
SPIN3-238	ENST00000640421	PSMB7	Q99436	277 aa		18.52	■□□□□ 0.56
SPIN3-238	ENST00000640421	NSUN3	Q9H649	340 aa	Known RBP	18.52	■□□□□ 0.56
SPIN3-238	ENST00000640421	PIGV	Q9NUD9	493 aa		18.52	■□□□□ 0.56
SPIN3-238	ENST00000640421	CLIC5	Q9NZA1	410 aa		18.52	■□□□□ 0.56
SPIN3-238	ENST00000640421	EHD2	Q9NZN4	543 aa		18.52	■□□□□ 0.56
SPIN3-238	ENST00000640421	COX16	Q9P0S2	106 aa		18.52	■□□□□ 0.56
SPIN3-238	ENST00000640421	LCMT1	Q9UIC8	334 aa		18.52	■□□□□ 0.56
SPIN3-238	ENST00000640421	CTAGE9	A4FU28	777 aa		18.52	■□□□□ 0.55
SPIN3-238	ENST00000640421	MDM4	O15151	490 aa		18.52	■□□□□ 0.55
SPIN3-238	ENST00000640421	ENDOD1	O94919	500 aa		18.52	■□□□□ 0.55
SPIN3-238	ENST00000640421	IGLV3-25	P01717	112 aa		18.52	■□□□□ 0.55
SPIN3-238	ENST00000640421	HOXA9	P31269	272 aa		18.52	■□□□□ 0.55
SPIN3-238	ENST00000640421	CTNNA1	P35221	906 aa	Known RBP	18.52	■□□□□ 0.55
SPIN3-238	ENST00000640421	ACAP1	Q15027	740 aa		18.52	■□□□□ 0.55
SPIN3-238	ENST00000640421	ATP13A4	Q4VNC1	1196 aa		18.52	■□□□□ 0.55
SPIN3-238	ENST00000640421	SNX30	Q5VWJ9	437 aa		18.52	■□□□□ 0.55
SPIN3-238	ENST00000640421	C12orf76	Q8N812	135 aa	Predicted RBP	18.52	■□□□□ 0.55
SPIN3-238	ENST00000640421	OVCA2	Q8WZ82	227 aa		18.52	■□□□□ 0.55
SPIN3-238	ENST00000640421	CORO1B	Q9BR76	489 aa		18.52	■□□□□ 0.55
SPIN3-238	ENST00000640421	PCSK1N	Q9UHG2	260 aa		18.52	■□□□□ 0.55
SPIN3-238	ENST00000640421	SFMBT1	Q9UHJ3	866 aa		18.52	■□□□□ 0.55
SPIN3-238	ENST00000640421	STAP1	Q9ULZ2	295 aa		18.52	■□□□□ 0.55
SPIN3-238	ENST00000640421	DENND4C	Q5VZ89	1909 aa		18.52	■□□□□ 0.55
SPIN3-238	ENST00000640421	TMEM265	A0A087WTH1	108 aa		18.51	■□□□□ 0.55
SPIN3-238	ENST00000640421	MSI1	O43347	362 aa	Known RBP	18.51	■□□□□ 0.55
SPIN3-238	ENST00000640421	TRUB2	O95900	331 aa	Known RBP	18.51	■□□□□ 0.55
SPIN3-238	ENST00000640421	CCR2	P41597	374 aa		18.51	■□□□□ 0.55
SPIN3-238	ENST00000640421	SSR1	P43307	286 aa	Known RBP	18.51	■□□□□ 0.55
SPIN3-238	ENST00000640421	PSEN1	P49768	467 aa		18.51	■□□□□ 0.55
SPIN3-238	ENST00000640421	PEX5	P50542	639 aa		18.51	■□□□□ 0.55
SPIN3-238	ENST00000640421	AMPD2	Q01433	879 aa		18.51	■□□□□ 0.55
SPIN3-238	ENST00000640421	NME3	Q13232	169 aa		18.51	■□□□□ 0.55
SPIN3-238	ENST00000640421	EIF4EBP2	Q13542	120 aa	Predicted RBP	18.51	■□□□□ 0.55
SPIN3-238	ENST00000640421	DCAF12L1	Q5VU92	463 aa		18.51	■□□□□ 0.55
SPIN3-238	ENST00000640421	STRADA	Q7RTN6	431 aa		18.51	■□□□□ 0.55
SPIN3-238	ENST00000640421	ACSF2	Q96CM8	615 aa	Predicted RBP	18.51	■□□□□ 0.55
SPIN3-238	ENST00000640421	CDCA3	Q99618	268 aa	Predicted RBP	18.51	■□□□□ 0.55
SPIN3-238	ENST00000640421	SMOC2	Q9H3U7	446 aa		18.51	■□□□□ 0.55
SPIN3-238	ENST00000640421	DDIT4	Q9NX09	232 aa		18.51	■□□□□ 0.55
SPIN3-238	ENST00000640421	DNMT3B	Q9UBC3	853 aa	Known RBP	18.51	■□□□□ 0.55
SPIN3-238	ENST00000640421	CCDC195	A0A1B0GUA6	201 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	C2orf78	A6NCI8	922 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	TLR5	O60602	858 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	RNF8	O76064	485 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	TUBB4A	P04350	444 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	HNRNPA1	P09651	372 aa	Known RBP eCLIP	18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	GABRR2	P28476	465 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	CXCR5	P32302	372 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	PCK1	P35558	622 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	GJC1	P36383	396 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	PAPD7	Q5XG87	772 aa	Known RBP	18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	MSANTD2	Q6P1R3	559 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	ELMOD1	Q8N336	334 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	PDZD8	Q8NEN9	1154 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	PGAP3	Q96FM1	320 aa	Predicted RBP	18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	FAM161B	Q96MY7	647 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	TRIM62	Q9BVG3	475 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	WDR6	Q9NNW5	1121 aa	Known RBP	18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	ZDHHC7	Q9NXF8	308 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	TRPM5	Q9NZQ8	1165 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	UXT	Q9UBK9	157 aa	Predicted RBP	18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	USP18	Q9UMW8	372 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	PCDHA3	Q9Y5H8	950 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	MTCH2	Q9Y6C9	303 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421		I6L893	689 aa	Predicted RBP	18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	SRGAP2	O75044	1071 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	CTNNA2	P26232	953 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	NTHL1	P78549	312 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	RPS6KA1	Q15418	735 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	SMTNL2	Q2TAL5	461 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	KCNT1	Q5JUK3	1230 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	RSRC2	Q7L4I2	434 aa	Known RBP	18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	FAM131B	Q86XD5	332 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	RNF139	Q8WU17	664 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	PRKD2	Q9BZL6	878 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	FAM204A	Q9H8W3	233 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	ZWILCH	Q9H900	591 aa		18.5	■□□□□ 0.55
SPIN3-238	ENST00000640421	ANLN	Q9NQW6	1124 aa		18.5	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms