RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 DNAJC6O75061 913 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 CILPO75339 1184 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 METTL18O95568 372 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 IL4RP24394 825 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 GRIK3Q13003 919 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 SPDYAQ5MJ70 313 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 SCUBE3Q8IX30 993 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 PHC3Q8NDX5 983 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 PCDH19Q8TAB3 1148 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 CNPY3Q9BT09 278 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 IL1RAPL1Q9NZN1 696 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 PAK5Q9P286 719 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 PHIPQ8WWQ0 1821 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 C2CD4BA6NLJ0 364 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 PRR5-ARHGAP8B1AHC4 643 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 TGDSO95455 350 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 STAG3L1P0CL83 205 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 MRPS35P82673 323 aaKnown RBP17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 ARHGAP8P85298 464 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 GRM1Q13255 1194 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 TFDP2Q14188 446 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 SURF1Q15526 300 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 EFCAB12Q6NXP0 572 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 CASC4Q6P4E1 433 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 PQLC3Q8N755 202 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 ZNF483Q8TF39 744 aaPredicted RBP17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 FAM172AQ8WUF8 416 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 APOL6Q9BWW8 343 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 BCO2Q9BYV7 579 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 ACKR2O00590 384 aa17.15■□□□□ 0.34
HNRNPU-228ENST00000640306 CHADO15335 359 aa17.15■□□□□ 0.34
HNRNPU-228ENST00000640306 F7P08709 466 aaPredicted RBP17.15■□□□□ 0.34
HNRNPU-228ENST00000640306 UBTFL6P0CB48 400 aaPredicted RBP17.15■□□□□ 0.34
HNRNPU-228ENST00000640306 MXD4Q14582 209 aaPredicted RBP17.15■□□□□ 0.34
HNRNPU-228ENST00000640306 POU5F2Q8N7G0 328 aa17.15■□□□□ 0.34
HNRNPU-228ENST00000640306 PPP1R14CQ8TAE6 165 aa17.15■□□□□ 0.34
HNRNPU-228ENST00000640306 PGLYRP2Q96PD5 576 aa17.15■□□□□ 0.34
HNRNPU-228ENST00000640306 CEP41Q9BYV8 373 aa17.15■□□□□ 0.34
HNRNPU-228ENST00000640306 PHACTR1Q9C0D0 580 aa17.15■□□□□ 0.34
HNRNPU-228ENST00000640306 RLFQ13129 1914 aa17.15■□□□□ 0.34
HNRNPU-228ENST00000640306 SLC15A5A6NIM6 579 aa17.15■□□□□ 0.34
HNRNPU-228ENST00000640306 APOL1O14791 398 aa17.15■□□□□ 0.34
HNRNPU-228ENST00000640306 DDNO94850 711 aaPredicted RBP17.15■□□□□ 0.34
HNRNPU-228ENST00000640306 SP100P23497 879 aaPredicted RBP17.15■□□□□ 0.34
HNRNPU-228ENST00000640306 GBE1Q04446 702 aa17.15■□□□□ 0.34
HNRNPU-228ENST00000640306 CCDC14Q49A88 953 aa17.15■□□□□ 0.34
HNRNPU-228ENST00000640306 WDR78Q5VTH9 848 aa17.15■□□□□ 0.34
HNRNPU-228ENST00000640306 METTL7BQ6UX53 244 aa17.15■□□□□ 0.34
HNRNPU-228ENST00000640306 TSHZ1Q6ZSZ6 1077 aa17.15■□□□□ 0.34
HNRNPU-228ENST00000640306 DNERQ8NFT8 737 aa17.15■□□□□ 0.34
HNRNPU-228ENST00000640306 HPDLQ96IR7 371 aa17.15■□□□□ 0.34
HNRNPU-228ENST00000640306 ANKRD27Q96NW4 1050 aa17.15■□□□□ 0.34
HNRNPU-228ENST00000640306 TUBB6Q9BUF5 446 aa17.15■□□□□ 0.34
HNRNPU-228ENST00000640306 KLC2Q9H0B6 622 aa17.15■□□□□ 0.34
HNRNPU-228ENST00000640306 PTPRHQ9HD43 1115 aa17.15■□□□□ 0.34
HNRNPU-228ENST00000640306 MYO18AQ92614 2054 aaKnown RBP17.15■□□□□ 0.34
HNRNPU-228ENST00000640306 HMX2A2RU54 273 aa17.14■□□□□ 0.33
HNRNPU-228ENST00000640306 MYCNP04198 464 aaPredicted RBP17.14■□□□□ 0.33
HNRNPU-228ENST00000640306 ADORA2AP29274 412 aa17.14■□□□□ 0.33
HNRNPU-228ENST00000640306 LRRC36Q1X8D7 754 aa17.14■□□□□ 0.33
HNRNPU-228ENST00000640306 SNRNP25Q9BV90 132 aaKnown RBP17.14■□□□□ 0.33
HNRNPU-228ENST00000640306 KRT82Q9NSB4 513 aa17.14■□□□□ 0.33
HNRNPU-228ENST00000640306 MFHAS1Q9Y4C4 1052 aa17.14■□□□□ 0.33
HNRNPU-228ENST00000640306 APOEP02649 317 aa17.14■□□□□ 0.33
HNRNPU-228ENST00000640306 RPL10AP62906 217 aaKnown RBP17.14■□□□□ 0.33
HNRNPU-228ENST00000640306 KRT72Q14CN4 511 aa17.14■□□□□ 0.33
HNRNPU-228ENST00000640306 RIPOR1Q6ZS17 1223 aa17.14■□□□□ 0.33
HNRNPU-228ENST00000640306 PPFIBP2Q8ND30 876 aa17.14■□□□□ 0.33
HNRNPU-228ENST00000640306 DEPDC1BQ8WUY9 529 aa17.14■□□□□ 0.33
HNRNPU-228ENST00000640306 FAM136AQ96C01 138 aa17.14■□□□□ 0.33
HNRNPU-228ENST00000640306 PCDH18Q9HCL0 1135 aa17.14■□□□□ 0.33
HNRNPU-228ENST00000640306 MGAMO43451 1857 aa17.14■□□□□ 0.33
HNRNPU-228ENST00000640306 C19orf81C9J6K1 198 aa17.14■□□□□ 0.33
HNRNPU-228ENST00000640306 ZCCHC18P0CG32 403 aa17.14■□□□□ 0.33
HNRNPU-228ENST00000640306 SKIP12755 728 aa17.14■□□□□ 0.33
HNRNPU-228ENST00000640306 KCNA4P22459 653 aa17.14■□□□□ 0.33
HNRNPU-228ENST00000640306 PROZP22891 400 aa17.14■□□□□ 0.33
HNRNPU-228ENST00000640306 GJC2Q5T442 439 aaPredicted RBP17.14■□□□□ 0.33
HNRNPU-228ENST00000640306 PMF1Q6P1K2 205 aa17.14■□□□□ 0.33
HNRNPU-228ENST00000640306 CRLF3Q8IUI8 442 aa17.14■□□□□ 0.33
HNRNPU-228ENST00000640306 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.14■□□□□ 0.334e-14■■□□□ 12.7
HNRNPU-228ENST00000640306 GGA3Q9NZ52 723 aa17.14■□□□□ 0.33
HNRNPU-228ENST00000640306 CENPFP49454 3210 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 ITM2AO43736 263 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 GOLGA7BQ2TAP0 167 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 SCUBE1Q8IWY4 988 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 FBXO16Q8IX29 292 aaPredicted RBP17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 EFCAB3Q8N7B9 438 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 TEKT4Q8WW24 435 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 USP6NLQ92738 828 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 C12orf42Q96LP6 360 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 SPATA33Q96N06 139 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 PANX3Q96QZ0 392 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 SYT17Q9BSW7 474 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 STX18Q9P2W9 335 aaKnown RBP17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 RPL26L1Q9UNX3 145 aaKnown RBP17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 LRCH1Q9Y2L9 728 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 PARP14Q460N5 1801 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 SMAPO00193 183 aa17.13■□□□□ 0.33
HNRNPU-228ENST00000640306 MAP3K7O43318 606 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms