RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 IGSF9BQ9UPX0 1349 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 LAMA3Q16787 3333 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 PSMA7O14818 248 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 TBX3O15119 743 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 MATN3O15232 486 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 HBP1O60381 514 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 STX10O60499 249 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 EYA4O95677 639 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 MYL1P05976 194 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 IQCF3P0C7M6 154 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 EEF1GP26641 437 aaKnown RBP6.53□□□□□ -1.36
ATM-229ENST00000639953 KLRC1P26715 233 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 SFNP31947 248 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 THPOP40225 353 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 MTIF2P46199 727 aaKnown RBP6.53□□□□□ -1.36
ATM-229ENST00000639953 JAK3P52333 1124 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 PRKCEQ02156 737 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 TMEM266Q2M3C6 531 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 TCTN1Q2MV58 587 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 HERC4Q5GLZ8 1057 aaPredicted RBP6.53□□□□□ -1.36
ATM-229ENST00000639953 SLC35F1Q5T1Q4 408 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 PLA2G4FQ68DD2 849 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 GJB7Q6PEY0 223 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 GLB1LQ6UWU2 654 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 TPH2Q8IWU9 490 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 RBM12BQ8IXT5 1001 aaKnown RBP6.53□□□□□ -1.36
ATM-229ENST00000639953 SLC35F6Q8N357 371 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 TMEM199Q8N511 208 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 ATP8B4Q8TF62 1192 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 DNAJB3Q8WWF6 145 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 MBD6Q96DN6 1003 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 CDK5RAP3Q96JB5 506 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 ERGIC2Q96RQ1 377 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.53□□□□□ -1.36
ATM-229ENST00000639953 JAM3Q9BX67 310 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 CARD6Q9BX69 1037 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 STRA6Q9BX79 667 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 C1QTNF3Q9BXJ4 246 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 FAM49AQ9H0Q0 323 aaPredicted RBP6.53□□□□□ -1.36
ATM-229ENST00000639953 BHMT2Q9H2M3 363 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 CDIP1Q9H305 208 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 SIX2Q9NPC8 291 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 LZTFL1Q9NQ48 299 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 ZNF446Q9NWS9 450 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 PPP4R1LQ9P1A2 415 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 ARHGAP20Q9P2F6 1191 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 PPARGC1AQ9UBK2 798 aaKnown RBP6.53□□□□□ -1.36
ATM-229ENST00000639953 PCDHB4Q9Y5E5 795 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.53□□□□□ -1.36
ATM-229ENST00000639953 TET1Q8NFU7 2136 aa6.53□□□□□ -1.36
ATM-229ENST00000639953 PTPRSQ13332 1948 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 GBF1Q92538 1859 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 FAM170AA1A519 330 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 MBLAC1A4D2B0 266 aaPredicted RBP6.52□□□□□ -1.37
ATM-229ENST00000639953 NBNO60934 754 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 AKAP3O75969 853 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 GJB6O95452 261 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 CHRNA1P02708 482 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 PNMA6AP0CW24 399 aaPredicted RBP6.52□□□□□ -1.37
ATM-229ENST00000639953 GNAT1P11488 350 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 ZSCAN20P17040 1043 aaPredicted RBP6.52□□□□□ -1.37
ATM-229ENST00000639953 SLC9A1P19634 815 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 CLCN3P51790 818 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 NPEPPSP55786 919 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 ZXDAP98168 799 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 BFSP2Q13515 415 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 EPHA7Q15375 998 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 ELF2Q15723 593 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 FXNQ16595 210 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 MEA1Q16626 185 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 KCTD19Q17RG1 926 aaPredicted RBP6.52□□□□□ -1.37
ATM-229ENST00000639953 ERCC6LQ2NKX8 1250 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 ASTE1Q2TB18 679 aaPredicted RBP6.52□□□□□ -1.37
ATM-229ENST00000639953 MTERF2Q49AM1 385 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 EMC4Q5J8M3 183 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 HABP4Q5JVS0 413 aaKnown RBP6.52□□□□□ -1.37
ATM-229ENST00000639953 TMEM240Q5SV17 173 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 C1orf220Q5T0J3 134 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 PHF19Q5T6S3 580 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 PDXDC1Q6P996 788 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 MTHFD1LQ6UB35 978 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 TMC5Q6UXY8 1006 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 ZNF365Q70YC5 407 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 LRRC8DQ7L1W4 858 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 MAEAQ7L5Y9 396 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 OTOP2Q7RTS6 562 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 MYOCDQ8IZQ8 938 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 LRRC71Q8N4P6 559 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 NOC3LQ8WTT2 800 aaKnown RBP6.52□□□□□ -1.37
ATM-229ENST00000639953 ZNF668Q96K58 619 aaPredicted RBP6.52□□□□□ -1.37
ATM-229ENST00000639953 CRACR2AQ9BSW2 395 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 GANQ9H2C0 597 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 NDST4Q9H3R1 872 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 ZHX3Q9H4I2 956 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 IL23AQ9NPF7 189 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 ST7Q9NRC1 585 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 PAXBP1Q9Y5B6 917 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 NPFFR2Q9Y5X5 522 aa6.52□□□□□ -1.37
ATM-229ENST00000639953 EPN1Q9Y6I3 576 aaPredicted RBP6.52□□□□□ -1.37
ATM-229ENST00000639953 SZT2Q5T011 3432 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms