RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 MAP3K13O43283 966 aa17.76■□□□□ 0.43
SMN2-216ENST00000638794 CACNG3O60359 315 aa17.76■□□□□ 0.43
SMN2-216ENST00000638794 KRT37O76014 449 aa17.76■□□□□ 0.43
SMN2-216ENST00000638794 RARGP13631 454 aa17.76■□□□□ 0.43
SMN2-216ENST00000638794 HOXB2P14652 356 aa17.76■□□□□ 0.43
SMN2-216ENST00000638794 TYRP14679 529 aa17.76■□□□□ 0.43
SMN2-216ENST00000638794 PTGER3P43115 390 aa17.76■□□□□ 0.43
SMN2-216ENST00000638794 KIF11P52732 1056 aa17.76■□□□□ 0.43
SMN2-216ENST00000638794 PPP1R26Q5T8A7 1209 aaPredicted RBP17.76■□□□□ 0.43
SMN2-216ENST00000638794 EGFLAMQ63HQ2 1017 aa17.76■□□□□ 0.43
SMN2-216ENST00000638794 CCDC150Q8NCX0 1101 aa17.76■□□□□ 0.43
SMN2-216ENST00000638794 XPO6Q96QU8 1125 aaKnown RBP17.76■□□□□ 0.43
SMN2-216ENST00000638794 SCAND2PQ9GZW5 306 aaPredicted RBP17.76■□□□□ 0.43
SMN2-216ENST00000638794 TMEM9BQ9NQ34 198 aa17.76■□□□□ 0.43
SMN2-216ENST00000638794 MARK1Q9P0L2 795 aa17.76■□□□□ 0.43
SMN2-216ENST00000638794 DNMT3LQ9UJW3 386 aa17.76■□□□□ 0.43
SMN2-216ENST00000638794 NAGPAQ9UK23 515 aa17.76■□□□□ 0.43
SMN2-216ENST00000638794 STARD13Q9Y3M8 1113 aa17.76■□□□□ 0.43
SMN2-216ENST00000638794 ASCC3Q8N3C0 2202 aaKnown RBP17.76■□□□□ 0.43
SMN2-216ENST00000638794 ASPMQ8IZT6 3477 aa17.76■□□□□ 0.43
SMN2-216ENST00000638794 ZNF202O95125 648 aa17.75■□□□□ 0.43
SMN2-216ENST00000638794 GABRG2P18507 467 aa17.75■□□□□ 0.43
SMN2-216ENST00000638794 NTSR1P30989 418 aa17.75■□□□□ 0.43
SMN2-216ENST00000638794 WASP42768 502 aa17.75■□□□□ 0.43
SMN2-216ENST00000638794 NOVA1P51513 510 aaKnown RBP17.75■□□□□ 0.43
SMN2-216ENST00000638794 IRX4P78413 519 aa17.75■□□□□ 0.43
SMN2-216ENST00000638794 BYSLQ13895 437 aaKnown RBP17.75■□□□□ 0.43
SMN2-216ENST00000638794 ZNF394Q53GI3 561 aa17.75■□□□□ 0.43
SMN2-216ENST00000638794 C10orf120Q5SQS8 335 aa17.75■□□□□ 0.43
SMN2-216ENST00000638794 DAB2IPQ5VWQ8 1189 aa17.75■□□□□ 0.43
SMN2-216ENST00000638794 KRT39Q6A163 491 aa17.75■□□□□ 0.43
SMN2-216ENST00000638794 TOGARAM2Q6ZUX3 1019 aa17.75■□□□□ 0.43
SMN2-216ENST00000638794 CCDC186Q7Z3E2 898 aa17.75■□□□□ 0.43
SMN2-216ENST00000638794 SCD5Q86SK9 330 aa17.75■□□□□ 0.43
SMN2-216ENST00000638794 SMYD4Q8IYR2 804 aaPredicted RBP17.75■□□□□ 0.43
SMN2-216ENST00000638794 SEMA4DQ92854 862 aa17.75■□□□□ 0.43
SMN2-216ENST00000638794 EEF2KMTQ96G04 330 aa17.75■□□□□ 0.43
SMN2-216ENST00000638794 ACOX2Q99424 681 aa17.75■□□□□ 0.43
SMN2-216ENST00000638794 DUSP16Q9BY84 665 aa17.75■□□□□ 0.43
SMN2-216ENST00000638794 TMEM74BQ9NUR3 256 aa17.75■□□□□ 0.43
SMN2-216ENST00000638794 CALCOCO1Q9P1Z2 691 aa17.75■□□□□ 0.43
SMN2-216ENST00000638794 WDR35Q9P2L0 1181 aa17.75■□□□□ 0.43
SMN2-216ENST00000638794 EVLQ9UI08 416 aaPredicted RBP17.75■□□□□ 0.43
SMN2-216ENST00000638794 A0A1W2PQF6 199 aa17.74■□□□□ 0.43
SMN2-216ENST00000638794 PRRT4C9JH25 899 aa17.74■□□□□ 0.43
SMN2-216ENST00000638794 CDX4O14627 284 aaPredicted RBP17.74■□□□□ 0.43
SMN2-216ENST00000638794 GIPC1O14908 333 aa17.74■□□□□ 0.43
SMN2-216ENST00000638794 GTF2H1P32780 548 aa17.74■□□□□ 0.43
SMN2-216ENST00000638794 PLA2G4AP47712 749 aa17.74■□□□□ 0.43
SMN2-216ENST00000638794 PSEN1P49768 467 aa17.74■□□□□ 0.43
SMN2-216ENST00000638794 MXI1P50539 228 aa17.74■□□□□ 0.43
SMN2-216ENST00000638794 MCCD1P59942 119 aaPredicted RBP17.74■□□□□ 0.43
SMN2-216ENST00000638794 ST3GAL2Q16842 350 aa17.74■□□□□ 0.43
SMN2-216ENST00000638794 EDRF1Q3B7T1 1238 aa17.74■□□□□ 0.43
SMN2-216ENST00000638794 TRIM61Q5EBN2 209 aa17.74■□□□□ 0.43
SMN2-216ENST00000638794 SPDYCQ5MJ68 293 aa17.74■□□□□ 0.43
SMN2-216ENST00000638794 Q6ZNB5 142 aa17.74■□□□□ 0.43
SMN2-216ENST00000638794 CHPFQ8IZ52 775 aa17.74■□□□□ 0.43
SMN2-216ENST00000638794 BHMTQ93088 406 aa17.74■□□□□ 0.43
SMN2-216ENST00000638794 DNAI2Q9GZS0 605 aa17.74■□□□□ 0.43
SMN2-216ENST00000638794 GDPD2Q9HCC8 539 aa17.74■□□□□ 0.43
SMN2-216ENST00000638794 ATP6V1DQ9Y5K8 247 aa17.74■□□□□ 0.43
SMN2-216ENST00000638794 USP3Q9Y6I4 520 aa17.74■□□□□ 0.43
SMN2-216ENST00000638794 ATXN2Q99700 1313 aaKnown RBP17.73■□□□□ 0.43
SMN2-216ENST00000638794 CFAP47Q6ZTR5 3102 aa17.73■□□□□ 0.43
SMN2-216ENST00000638794 ADAMTS9Q9P2N4 1935 aa17.73■□□□□ 0.43
SMN2-216ENST00000638794 STC2O76061 302 aa17.73■□□□□ 0.43
SMN2-216ENST00000638794 SHC2P98077 582 aa17.73■□□□□ 0.43
SMN2-216ENST00000638794 SH3PXD2AQ5TCZ1 1133 aa17.73■□□□□ 0.43
SMN2-216ENST00000638794 LYSMD4Q5XG99 296 aa17.73■□□□□ 0.43
SMN2-216ENST00000638794 TADA2BQ86TJ2 420 aa17.73■□□□□ 0.43
SMN2-216ENST00000638794 SYT12Q8IV01 421 aa17.73■□□□□ 0.43
SMN2-216ENST00000638794 ZNF276Q8N554 614 aa17.73■□□□□ 0.43
SMN2-216ENST00000638794 FBXL13Q8NEE6 735 aa17.73■□□□□ 0.43
SMN2-216ENST00000638794 ERLEC1Q96DZ1 483 aa17.73■□□□□ 0.43
SMN2-216ENST00000638794 P2RY11Q96G91 374 aa17.73■□□□□ 0.43
SMN2-216ENST00000638794 HEXIM2Q96MH2 286 aaKnown RBP17.73■□□□□ 0.43
SMN2-216ENST00000638794 ARID3AQ99856 593 aa17.73■□□□□ 0.43
SMN2-216ENST00000638794 CD248Q9HCU0 757 aa17.73■□□□□ 0.43
SMN2-216ENST00000638794 CISHQ9NSE2 258 aa17.73■□□□□ 0.43
SMN2-216ENST00000638794 PLK2Q9NYY3 685 aa17.73■□□□□ 0.43
SMN2-216ENST00000638794 CLIC5Q9NZA1 410 aa17.73■□□□□ 0.43
SMN2-216ENST00000638794 WDFY3Q8IZQ1 3526 aa17.73■□□□□ 0.43
SMN2-216ENST00000638794 KLKB1P03952 638 aa17.72■□□□□ 0.43
SMN2-216ENST00000638794 CISD3P0C7P0 127 aa17.72■□□□□ 0.43
SMN2-216ENST00000638794 EPB41P11171 864 aaKnown RBP17.72■□□□□ 0.43
SMN2-216ENST00000638794 RALAP11233 206 aa17.72■□□□□ 0.43
SMN2-216ENST00000638794 ITPKAP23677 461 aa17.72■□□□□ 0.43
SMN2-216ENST00000638794 DGKGP49619 791 aa17.72■□□□□ 0.43
SMN2-216ENST00000638794 RPL6Q02878 288 aaKnown RBP17.72■□□□□ 0.43
SMN2-216ENST00000638794 KIAA1211LQ6NV74 962 aa17.72■□□□□ 0.43
SMN2-216ENST00000638794 SLC4A11Q8NBS3 891 aa17.72■□□□□ 0.43
SMN2-216ENST00000638794 IPO4Q8TEX9 1081 aaKnown RBP17.72■□□□□ 0.43
SMN2-216ENST00000638794 FAXDC2Q96IV6 333 aa17.72■□□□□ 0.43
SMN2-216ENST00000638794 GABRG3Q99928 467 aa17.72■□□□□ 0.43
SMN2-216ENST00000638794 NUSAP1Q9BXS6 441 aaKnown RBP17.72■□□□□ 0.43
SMN2-216ENST00000638794 RAB20Q9NX57 234 aa17.72■□□□□ 0.43
SMN2-216ENST00000638794 RASAL2Q9UJF2 1139 aa17.72■□□□□ 0.43
SMN2-216ENST00000638794 PILRBQ9UKJ0 227 aa17.72■□□□□ 0.43
SMN2-216ENST00000638794 RAD54BQ9Y620 910 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms