RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 FICDQ9BVA6 458 aa14.81□□□□□ -0.04
SCARB2-208ENST00000638372 NOD2Q9HC29 1040 aa14.81□□□□□ -0.04
SCARB2-208ENST00000638372 DDX20Q9UHI6 824 aaKnown RBP14.81□□□□□ -0.04
SCARB2-208ENST00000638372 BCL9LQ86UU0 1499 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 F5H5T6 163 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 ST8SIA6P61647 398 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 SLC6A3Q01959 620 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 LAMB3Q13751 1172 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 ARHGEF7Q14155 803 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 CXCL17Q6UXB2 119 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 TINF2Q9BSI4 451 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 SLC24A3Q9HC58 644 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 STARD7Q9NQZ5 370 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 RUVBL2Q9Y230 463 aaKnown RBP14.8□□□□□ -0.04
SCARB2-208ENST00000638372 DNAJC16Q9Y2G8 782 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 TIMM44O43615 452 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 MAFO75444 373 aaPredicted RBP14.8□□□□□ -0.04
SCARB2-208ENST00000638372 MYO1DO94832 1006 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 CCND1P24385 295 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 PSEN2P49810 448 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 KATNAL2Q8IYT4 538 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 HS6ST3Q8IZP7 471 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 ARHGAP18Q8N392 663 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 HTR3CQ8WXA8 447 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 SEMA4DQ92854 862 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 EME1Q96AY2 570 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 KLRG1Q96E93 195 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 AKAP10O43572 662 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 TMCC1O94876 653 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 MRNIPQ6NTE8 343 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.8□□□□□ -0.04
SCARB2-208ENST00000638372 GALNT4Q8N4A0 578 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 CD248Q9HCU0 757 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.8□□□□□ -0.04
SCARB2-208ENST00000638372 VANGL2Q9ULK5 521 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 SLIT3O75094 1523 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 SYCE1LA8MT33 242 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 MT-CO1P00395 513 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 STMN1P16949 149 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 KDELR1P24390 212 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 COPAP53621 1224 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 FSCN1Q16658 493 aaKnown RBP14.8□□□□□ -0.04
SCARB2-208ENST00000638372 TREML2Q5T2D2 321 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 CAPRIN2Q6IMN6 1127 aaKnown RBP14.8□□□□□ -0.04
SCARB2-208ENST00000638372 ZNF410Q86VK4 478 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 PWWP2AQ96N64 755 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 ASPSCR1Q9BZE9 553 aa14.8□□□□□ -0.04
SCARB2-208ENST00000638372 TSPYL2Q9H2G4 693 aaPredicted RBP14.8□□□□□ -0.04
SCARB2-208ENST00000638372 ROBO3Q96MS0 1386 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 APOC4-APOC2K7ER74 178 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 SPTLC1O15269 473 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 APOC2P02655 101 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 SHBGP04278 402 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 AKR1A1P14550 325 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 EEF1DP29692 281 aaKnown RBP14.79□□□□□ -0.04
SCARB2-208ENST00000638372 RGS4P49798 205 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 NUDT2P50583 147 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 PCYOX1LQ8NBM8 494 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.79□□□□□ -0.04
SCARB2-208ENST00000638372 ABTB1Q969K4 478 aaPredicted RBP14.79□□□□□ -0.04
SCARB2-208ENST00000638372 WNK4Q96J92 1243 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 DLG5Q8TDM6 1919 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 GOLGA8TH3BQL2 631 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 RALBP11234 206 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 MAP4P27816 1152 aaKnown RBP14.79□□□□□ -0.04
SCARB2-208ENST00000638372 MED21Q13503 144 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 ACO2Q99798 780 aaKnown RBP14.79□□□□□ -0.04
SCARB2-208ENST00000638372 PDGFCQ9NRA1 345 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 DCDC2Q9UHG0 476 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 CRLS1Q9UJA2 301 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 TNFSF13BQ9Y275 285 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 TPST1O60507 370 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 BDNFP23560 247 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 DNAJB2P25686 324 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 CCR1P32246 355 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 PLIN5Q00G26 463 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 MGAT5Q09328 741 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 TTMPQ5BVD1 217 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 AGAP9Q5VTM2 703 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 IQSEC1Q6DN90 963 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 SENP8Q96LD8 212 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 KREMEN1Q96MU8 473 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 MTG1Q9BT17 334 aaPredicted RBP14.79□□□□□ -0.04
SCARB2-208ENST00000638372 ULBP1Q9BZM6 244 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 ACOT9Q9Y305 439 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 V9GYQ6 96 aa14.79□□□□□ -0.04
SCARB2-208ENST00000638372 RNF103O00237 685 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 STK25O00506 426 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 ASS1P00966 412 aaKnown RBP14.78□□□□□ -0.04
SCARB2-208ENST00000638372 USP17L7P0C7H9 530 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 SERPINB5P36952 375 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 DEFB128Q7Z7B8 93 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 MED1Q15648 1581 aaPredicted RBP14.78□□□□□ -0.04
SCARB2-208ENST00000638372 NCF1BA6NI72 391 aaPredicted RBP14.78□□□□□ -0.04
SCARB2-208ENST00000638372 NCF1CA8MVU1 366 aaPredicted RBP14.78□□□□□ -0.04
SCARB2-208ENST00000638372 CYP1A2P05177 515 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 NCF1P14598 390 aaPredicted RBP14.78□□□□□ -0.04
SCARB2-208ENST00000638372 MGAT1P26572 445 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 SERPINB8P50452 374 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 PPIL2Q13356 520 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms