RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 PFKLP17858 780 aa4.6□□□□□ -1.67
GABRA1-220ENST00000638159 CASRP41180 1078 aa4.6□□□□□ -1.67
GABRA1-220ENST00000638159 NPEPPSP55786 919 aa4.6□□□□□ -1.67
GABRA1-220ENST00000638159 PTENP60484 403 aa4.6□□□□□ -1.67
GABRA1-220ENST00000638159 ST3GAL1Q11201 340 aa4.6□□□□□ -1.67
GABRA1-220ENST00000638159 CTTNQ14247 550 aaKnown RBP4.6□□□□□ -1.67
GABRA1-220ENST00000638159 DCAF12Q5T6F0 453 aa4.6□□□□□ -1.67
GABRA1-220ENST00000638159 RAB43Q86YS6 212 aa4.6□□□□□ -1.67
GABRA1-220ENST00000638159 P3H2Q8IVL5 708 aa4.6□□□□□ -1.67
GABRA1-220ENST00000638159 CRIPAKQ8N1N5 446 aa4.6□□□□□ -1.67
GABRA1-220ENST00000638159 FANCBQ8NB91 859 aa4.6□□□□□ -1.67
GABRA1-220ENST00000638159 FAM98AQ8NCA5 519 aaKnown RBP4.6□□□□□ -1.67
GABRA1-220ENST00000638159 SPDYE1Q8NFV5 336 aaPredicted RBP4.6□□□□□ -1.67
GABRA1-220ENST00000638159 FGD4Q96M96 766 aa4.6□□□□□ -1.67
GABRA1-220ENST00000638159 TRIM62Q9BVG3 475 aa4.6□□□□□ -1.67
GABRA1-220ENST00000638159 LRRC27Q9C0I9 530 aa4.6□□□□□ -1.67
GABRA1-220ENST00000638159 SMG9Q9H0W8 520 aaKnown RBP4.6□□□□□ -1.67
GABRA1-220ENST00000638159 EPS8L2Q9H6S3 715 aa4.6□□□□□ -1.67
GABRA1-220ENST00000638159 UPF2Q9HAU5 1272 aaKnown RBP4.6□□□□□ -1.67
GABRA1-220ENST00000638159 CBX8Q9HC52 389 aa4.6□□□□□ -1.67
GABRA1-220ENST00000638159 GPAMQ9HCL2 828 aa4.6□□□□□ -1.67
GABRA1-220ENST00000638159 AVENQ9NQS1 362 aaPredicted RBP4.6□□□□□ -1.67
GABRA1-220ENST00000638159 GEMIN8Q9NWZ8 242 aaKnown RBP4.6□□□□□ -1.67
GABRA1-220ENST00000638159 SH3BGRL2Q9UJC5 107 aa4.6□□□□□ -1.67
GABRA1-220ENST00000638159 CCDC168Q8NDH2 2452 aa4.6□□□□□ -1.67
GABRA1-220ENST00000638159 METTL12A8MUP2 240 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 F5H423 210 aaPredicted RBP4.59□□□□□ -1.67
GABRA1-220ENST00000638159 ATP9AO75110 1047 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 C4BPAP04003 597 aaKnown RBP4.59□□□□□ -1.67
GABRA1-220ENST00000638159 MCF2P10911 925 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 KRT13P13646 458 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 CD19P15391 556 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 DNASE1P24855 282 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 PEX3P56589 373 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 ASIC2Q16515 512 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 CRTC1Q6UUV9 634 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 MIB1Q86YT6 1006 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 SIAH1Q8IUQ4 282 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 MAP4K3Q8IVH8 894 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 MYCT1Q8N699 235 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 LNX1Q8TBB1 728 aaPredicted RBP4.59□□□□□ -1.67
GABRA1-220ENST00000638159 PANK1Q8TE04 598 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 LINC01599Q8WXQ3 324 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 LNPKQ9C0E8 428 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 DPEP2Q9H4A9 486 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 SLC39A1Q9NY26 324 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 FAM13BQ9NYF5 915 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 HPCAL4Q9UM19 191 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 STON1Q9Y6Q2 735 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 A0A1B0GUH1 482 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 IDSB3KWA1 339 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 ACKR2O00590 384 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 KCNK3O14649 394 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 LDHAP00338 332 aaKnown RBP4.59□□□□□ -1.67
GABRA1-220ENST00000638159 PDGFRBP09619 1106 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 LIPCP11150 499 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 SLC2A4P14672 509 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 IDSP22304 550 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 PLA2G4AP47712 749 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 ILF3Q12906 894 aaKnown RBP eCLIP4.59□□□□□ -1.67
GABRA1-220ENST00000638159 DNAJC3Q13217 504 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 SEMA3FQ13275 785 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 LIPNQ5VXI9 398 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 FSTL4Q6MZW2 842 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 TIPARPQ7Z3E1 657 aaKnown RBP4.59□□□□□ -1.67
GABRA1-220ENST00000638159 BBS5Q8N3I7 341 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 ENAHQ8N8S7 591 aaPredicted RBP4.59□□□□□ -1.67
GABRA1-220ENST00000638159 GALNT11Q8NCW6 608 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 TARS2Q9BW92 718 aaKnown RBP4.59□□□□□ -1.67
GABRA1-220ENST00000638159 ELOVL4Q9GZR5 314 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 SENP2Q9HC62 589 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 FSCN3Q9NQT6 498 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 GMIPQ9P107 970 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 DLGAP2Q9P1A6 1054 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 COL20A1Q9P218 1284 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 COPG2Q9UBF2 871 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 PCDHGB6Q9Y5F9 930 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 FRMPD3Q5JV73 1810 aa4.59□□□□□ -1.67
GABRA1-220ENST00000638159 K7ENM7 598 aa4.59□□□□□ -1.68
GABRA1-220ENST00000638159 CACNB4O00305 520 aaPredicted RBP4.59□□□□□ -1.68
GABRA1-220ENST00000638159 OPA1O60313 960 aa4.59□□□□□ -1.68
GABRA1-220ENST00000638159 HOXD8P13378 290 aaPredicted RBP4.59□□□□□ -1.68
GABRA1-220ENST00000638159 CAPN3P20807 821 aa4.59□□□□□ -1.68
GABRA1-220ENST00000638159 POLR2BP30876 1174 aaKnown RBP4.59□□□□□ -1.68
GABRA1-220ENST00000638159 CDKN3Q16667 212 aa4.59□□□□□ -1.68
GABRA1-220ENST00000638159 CES4AQ5XG92 561 aa4.59□□□□□ -1.68
GABRA1-220ENST00000638159 KIAA0895LQ68EN5 471 aa4.59□□□□□ -1.68
GABRA1-220ENST00000638159 VSTM1Q6UX27 236 aa4.59□□□□□ -1.68
GABRA1-220ENST00000638159 CDH24Q86UP0 819 aa4.59□□□□□ -1.68
GABRA1-220ENST00000638159 TMEM86AQ8N2M4 240 aa4.59□□□□□ -1.68
GABRA1-220ENST00000638159 Q8N9G6 341 aaPredicted RBP4.59□□□□□ -1.68
GABRA1-220ENST00000638159 MSANTD4Q8NCY6 345 aa4.59□□□□□ -1.68
GABRA1-220ENST00000638159 OR2T34Q8NGX1 318 aa4.59□□□□□ -1.68
GABRA1-220ENST00000638159 FAM174AQ8TBP5 190 aa4.59□□□□□ -1.68
GABRA1-220ENST00000638159 GRIN3AQ8TCU5 1115 aa4.59□□□□□ -1.68
GABRA1-220ENST00000638159 PSMG2Q969U7 264 aa4.59□□□□□ -1.68
GABRA1-220ENST00000638159 SH3KBP1Q96B97 665 aa4.59□□□□□ -1.68
GABRA1-220ENST00000638159 NOX5Q96PH1 765 aa4.59□□□□□ -1.68
GABRA1-220ENST00000638159 TEFMQ96QE5 360 aaKnown RBP4.59□□□□□ -1.68
GABRA1-220ENST00000638159 TSPAN18Q96SJ8 248 aa4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms