RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 HCN2Q9UL51 889 aa18.61■□□□□ 0.57
PNKP-230ENST00000638016 RAB23Q9ULC3 237 aa18.61■□□□□ 0.57
PNKP-230ENST00000638016 INVSQ9Y283 1065 aa18.61■□□□□ 0.57
PNKP-230ENST00000638016 SGK1O00141 431 aa18.6■□□□□ 0.57
PNKP-230ENST00000638016 AXIN1O15169 862 aa18.6■□□□□ 0.57
PNKP-230ENST00000638016 P4HA2O15460 535 aa18.6■□□□□ 0.57
PNKP-230ENST00000638016 KLF8O95600 359 aaPredicted RBP18.6■□□□□ 0.57
PNKP-230ENST00000638016 ZBED1O96006 694 aa18.6■□□□□ 0.57
PNKP-230ENST00000638016 RALAP11233 206 aa18.6■□□□□ 0.57
PNKP-230ENST00000638016 EIF2DP41214 584 aaKnown RBP18.6■□□□□ 0.57
PNKP-230ENST00000638016 KIR2DL1P43626 348 aaPredicted RBP18.6■□□□□ 0.57
PNKP-230ENST00000638016 CCDC6Q16204 474 aa18.6■□□□□ 0.57
PNKP-230ENST00000638016 LAIR1Q6GTX8 287 aa18.6■□□□□ 0.57
PNKP-230ENST00000638016 TOGARAM2Q6ZUX3 1019 aa18.6■□□□□ 0.57
PNKP-230ENST00000638016 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.6■□□□□ 0.57
PNKP-230ENST00000638016 KBTBD6Q86V97 674 aa18.6■□□□□ 0.57
PNKP-230ENST00000638016 IRF2BP1Q8IU81 584 aa18.6■□□□□ 0.57
PNKP-230ENST00000638016 IL17RCQ8NAC3 791 aa18.6■□□□□ 0.57
PNKP-230ENST00000638016 TXNDC5Q8NBS9 432 aaKnown RBP18.6■□□□□ 0.57
PNKP-230ENST00000638016 GAB3Q8WWW8 586 aa18.6■□□□□ 0.57
PNKP-230ENST00000638016 EDEM1Q92611 657 aa18.6■□□□□ 0.57
PNKP-230ENST00000638016 SECISBP2LQ93073 1101 aaKnown RBP18.6■□□□□ 0.57
PNKP-230ENST00000638016 ERLEC1Q96DZ1 483 aa18.6■□□□□ 0.57
PNKP-230ENST00000638016 BBS2Q9BXC9 721 aa18.6■□□□□ 0.57
PNKP-230ENST00000638016 UBXN6Q9BZV1 441 aa18.6■□□□□ 0.57
PNKP-230ENST00000638016 LRRC4Q9HBW1 653 aa18.6■□□□□ 0.57
PNKP-230ENST00000638016 CLIC5Q9NZA1 410 aa18.6■□□□□ 0.57
PNKP-230ENST00000638016 MMP17Q9ULZ9 603 aa18.6■□□□□ 0.57
PNKP-230ENST00000638016 USP18Q9UMW8 372 aa18.6■□□□□ 0.57
PNKP-230ENST00000638016 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.6■□□□□ 0.57
PNKP-230ENST00000638016 YJEFN3A6XGL0 299 aa18.59■□□□□ 0.57
PNKP-230ENST00000638016 E7ENQ6 273 aa18.59■□□□□ 0.57
PNKP-230ENST00000638016 M0QYV0 167 aa18.59■□□□□ 0.57
PNKP-230ENST00000638016 ADAM23O75077 832 aa18.59■□□□□ 0.57
PNKP-230ENST00000638016 RPP40O75818 363 aaKnown RBP18.59■□□□□ 0.57
PNKP-230ENST00000638016 APBB3O95704 486 aa18.59■□□□□ 0.57
PNKP-230ENST00000638016 GNA14O95837 355 aa18.59■□□□□ 0.57
PNKP-230ENST00000638016 PAEPP09466 180 aa18.59■□□□□ 0.57
PNKP-230ENST00000638016 CCDC192P0DO97 292 aa18.59■□□□□ 0.57
PNKP-230ENST00000638016 LCP1P13796 627 aa18.59■□□□□ 0.57
PNKP-230ENST00000638016 TYRP14679 529 aa18.59■□□□□ 0.57
PNKP-230ENST00000638016 CNR2P34972 360 aa18.59■□□□□ 0.57
PNKP-230ENST00000638016 ANP32AP39687 249 aaKnown RBP18.59■□□□□ 0.57
PNKP-230ENST00000638016 GRIA2P42262 883 aa18.59■□□□□ 0.57
PNKP-230ENST00000638016 PLA2G4AP47712 749 aa18.59■□□□□ 0.57
PNKP-230ENST00000638016 ID4P47928 161 aa18.59■□□□□ 0.57
PNKP-230ENST00000638016 PSEN1P49768 467 aa18.59■□□□□ 0.57
PNKP-230ENST00000638016 ZNF132P52740 706 aa18.59■□□□□ 0.57
PNKP-230ENST00000638016 DPCR1Q3MIW9 517 aa18.59■□□□□ 0.57
PNKP-230ENST00000638016 BTBD8Q5XKL5 378 aa18.59■□□□□ 0.57
PNKP-230ENST00000638016 PM20D1Q6GTS8 502 aa18.59■□□□□ 0.57
PNKP-230ENST00000638016 ANO7Q6IWH7 933 aa18.59■□□□□ 0.57
PNKP-230ENST00000638016 PMF1Q6P1K2 205 aa18.59■□□□□ 0.57
PNKP-230ENST00000638016 LCLAT1Q6UWP7 414 aa18.59■□□□□ 0.57
PNKP-230ENST00000638016 TSTD1Q8NFU3 115 aa18.59■□□□□ 0.57
PNKP-230ENST00000638016 CLEC4CQ8WTT0 213 aa18.59■□□□□ 0.57
PNKP-230ENST00000638016 ACP6Q9NPH0 428 aa18.59■□□□□ 0.57
PNKP-230ENST00000638016 DNAJC17Q9NVM6 304 aaKnown RBP18.59■□□□□ 0.57
PNKP-230ENST00000638016 LSM7Q9UK45 103 aaKnown RBP18.59■□□□□ 0.57
PNKP-230ENST00000638016 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.59■□□□□ 0.57
PNKP-230ENST00000638016 SLC12A8A0AV02 714 aa18.58■□□□□ 0.56
PNKP-230ENST00000638016 TBC1D3BA6NDS4 549 aa18.58■□□□□ 0.56
PNKP-230ENST00000638016 CORO1AP31146 461 aaKnown RBP18.58■□□□□ 0.56
PNKP-230ENST00000638016 WASP42768 502 aa18.58■□□□□ 0.56
PNKP-230ENST00000638016 DGKEP52429 567 aa18.58■□□□□ 0.56
PNKP-230ENST00000638016 SLC8A3P57103 927 aa18.58■□□□□ 0.56
PNKP-230ENST00000638016 GOLGA8FQ08AF8 430 aa18.58■□□□□ 0.56
PNKP-230ENST00000638016 GOLGA8DPQ0D2H9 430 aa18.58■□□□□ 0.56
PNKP-230ENST00000638016 CRY1Q16526 586 aa18.58■□□□□ 0.56
PNKP-230ENST00000638016 HSP90AA4PQ58FG1 418 aa18.58■□□□□ 0.56
PNKP-230ENST00000638016 C10orf76Q5T2E6 689 aa18.58■□□□□ 0.56
PNKP-230ENST00000638016 RSRC2Q7L4I2 434 aaKnown RBP18.58■□□□□ 0.56
PNKP-230ENST00000638016 CAMKK1Q8N5S9 505 aa18.58■□□□□ 0.56
PNKP-230ENST00000638016 TERB1Q8NA31 727 aa18.58■□□□□ 0.56
PNKP-230ENST00000638016 MDGA1Q8NFP4 955 aa18.58■□□□□ 0.56
PNKP-230ENST00000638016 MARCH2Q9P0N8 246 aa18.58■□□□□ 0.56
PNKP-230ENST00000638016 DEC1Q9P2X7 70 aa18.58■□□□□ 0.56
PNKP-230ENST00000638016 SFMBT1Q9UHJ3 866 aa18.58■□□□□ 0.56
PNKP-230ENST00000638016 AJAP1Q9UKB5 411 aaPredicted RBP18.58■□□□□ 0.56
PNKP-230ENST00000638016 A0A0A0MRY4 1105 aa18.57■□□□□ 0.56
PNKP-230ENST00000638016 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.57■□□□□ 0.56
PNKP-230ENST00000638016 MSI1O43347 362 aaKnown RBP18.57■□□□□ 0.56
PNKP-230ENST00000638016 CACNG3O60359 315 aa18.57■□□□□ 0.56
PNKP-230ENST00000638016 RETP07949 1114 aa18.57■□□□□ 0.56
PNKP-230ENST00000638016 SETSIPP0DME0 302 aa18.57■□□□□ 0.56
PNKP-230ENST00000638016 SLC9A1P19634 815 aa18.57■□□□□ 0.56
PNKP-230ENST00000638016 MRPS21P82921 87 aaKnown RBP18.57■□□□□ 0.56
PNKP-230ENST00000638016 GCNT1Q02742 428 aa18.57■□□□□ 0.56
PNKP-230ENST00000638016 CETN1Q12798 172 aa18.57■□□□□ 0.56
PNKP-230ENST00000638016 DENND1CQ8IV53 801 aa18.57■□□□□ 0.56
PNKP-230ENST00000638016 SIX6OS1Q8N1H7 587 aa18.57■□□□□ 0.56
PNKP-230ENST00000638016 ZNF276Q8N554 614 aa18.57■□□□□ 0.56
PNKP-230ENST00000638016 SLC35F5Q8WV83 523 aa18.57■□□□□ 0.56
PNKP-230ENST00000638016 IPO9Q96P70 1041 aaKnown RBP18.57■□□□□ 0.56
PNKP-230ENST00000638016 SMOC1Q9H4F8 434 aa18.57■□□□□ 0.56
PNKP-230ENST00000638016 UBE2TQ9NPD8 197 aaPredicted RBP18.57■□□□□ 0.56
PNKP-230ENST00000638016 MARK1Q9P0L2 795 aa18.57■□□□□ 0.56
PNKP-230ENST00000638016 AGO1Q9UL18 857 aaKnown RBP18.57■□□□□ 0.56
PNKP-230ENST00000638016 SPTBN2O15020 2390 aa18.56■□□□□ 0.56
PNKP-230ENST00000638016 CCDC163A0A0D9SF12 145 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms