RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 DRG2P55039 364 aaKnown RBP11.98□□□□□ -0.49
CLN6-217ENST00000636964 CRYBG2Q8N1P7 616 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 KIF2BQ8N4N8 673 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 FNIP1Q8TF40 1166 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 HASPINQ8TF76 798 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 CALN1Q9BXU9 219 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 NOP53Q9NZM5 478 aaKnown RBP11.98□□□□□ -0.49
CLN6-217ENST00000636964 ZNF148Q9UQR1 794 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 PDCD11Q14690 1871 aaKnown RBP11.98□□□□□ -0.49
CLN6-217ENST00000636964 C3orf70A6NLC5 250 aaPredicted RBP11.98□□□□□ -0.49
CLN6-217ENST00000636964 ZSCAN5DPP0CG00 497 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 ZNF143P52747 638 aaPredicted RBP11.98□□□□□ -0.49
CLN6-217ENST00000636964 MMRN1Q13201 1228 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 OLFML1Q6UWY5 402 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 CCDC80Q76M96 950 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 FAM81AQ8TBF8 368 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 KHSRPQ92945 711 aaKnown RBP eCLIP11.98□□□□□ -0.49
CLN6-217ENST00000636964 SENP8Q96LD8 212 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 RMDN2Q96LZ7 410 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 SLC4A5Q9BY07 1137 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 ASNSD1Q9NWL6 643 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 GPATCH2LQ9NWQ4 482 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 DDX56Q9NY93 547 aaKnown RBP11.98□□□□□ -0.49
CLN6-217ENST00000636964 DPPA5A6NC42 116 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 CREB3O43889 395 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 BEST1O76090 585 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 TRUB2O95900 331 aaKnown RBP11.98□□□□□ -0.49
CLN6-217ENST00000636964 FESP07332 822 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 KDELR1P24390 212 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 SLC6A3Q01959 620 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 SFSWAPQ12872 951 aaKnown RBP11.98□□□□□ -0.49
CLN6-217ENST00000636964 CALCOCO2Q13137 446 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 CCDC14Q49A88 953 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 ANKRD20A2Q5SQ80 823 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 ANKRD20A1Q5TYW2 823 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 ANKRD20A3Q5VUR7 823 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 KIAA0319Q5VV43 1072 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 ANKRD52Q8NB46 1076 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 B3GALNT2Q8NCR0 500 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 RUNDC3BQ96NL0 473 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 TXLNGYQ9BZA5 131 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 CHST12Q9NRB3 414 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 MKS1Q9NXB0 559 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 A0A1B0GVG6 124 aa11.97□□□□□ -0.49
CLN6-217ENST00000636964 CST8O60676 142 aa11.97□□□□□ -0.49
CLN6-217ENST00000636964 GAS8O95995 478 aa11.97□□□□□ -0.49
CLN6-217ENST00000636964 KRT7P08729 469 aa11.97□□□□□ -0.49
CLN6-217ENST00000636964 HOXD10P28358 340 aa11.97□□□□□ -0.49
CLN6-217ENST00000636964 LRPAP1P30533 357 aa11.97□□□□□ -0.49
CLN6-217ENST00000636964 ATXN1P54253 815 aaKnown RBP11.97□□□□□ -0.49
CLN6-217ENST00000636964 NKX3-2P78367 333 aa11.97□□□□□ -0.49
CLN6-217ENST00000636964 BST2Q10589 180 aaKnown RBP11.97□□□□□ -0.49
CLN6-217ENST00000636964 KRT71Q3SY84 523 aa11.97□□□□□ -0.49
CLN6-217ENST00000636964 ARHGAP17Q68EM7 881 aa11.97□□□□□ -0.49
CLN6-217ENST00000636964 ZNF365Q70YC5 407 aa11.97□□□□□ -0.49
CLN6-217ENST00000636964 TRPM8Q7Z2W7 1104 aa11.97□□□□□ -0.49
CLN6-217ENST00000636964 SDCCAG8Q86SQ7 713 aaPredicted RBP11.97□□□□□ -0.49
CLN6-217ENST00000636964 SNRNP27Q8WVK2 155 aaKnown RBP11.97□□□□□ -0.49
CLN6-217ENST00000636964 ELAC2Q9BQ52 826 aaKnown RBP11.97□□□□□ -0.49
CLN6-217ENST00000636964 CNPY3Q9BT09 278 aa11.97□□□□□ -0.49
CLN6-217ENST00000636964 SEMA4AQ9H3S1 761 aa11.97□□□□□ -0.49
CLN6-217ENST00000636964 FAM124BQ9H5Z6 455 aaPredicted RBP11.97□□□□□ -0.49
CLN6-217ENST00000636964 TP73O15350 636 aa11.97□□□□□ -0.49
CLN6-217ENST00000636964 LIASO43766 372 aa11.97□□□□□ -0.49
CLN6-217ENST00000636964 E2F6O75461 281 aa11.97□□□□□ -0.49
CLN6-217ENST00000636964 FXNQ16595 210 aa11.97□□□□□ -0.49
CLN6-217ENST00000636964 KBTBD12Q3ZCT8 623 aa11.97□□□□□ -0.49
CLN6-217ENST00000636964 GALNTL6Q49A17 601 aa11.97□□□□□ -0.49
CLN6-217ENST00000636964 MDH1BQ5I0G3 518 aa11.97□□□□□ -0.49
CLN6-217ENST00000636964 DSTYKQ6XUX3 929 aa11.97□□□□□ -0.49
CLN6-217ENST00000636964 HACE1Q8IYU2 909 aa11.97□□□□□ -0.49
CLN6-217ENST00000636964 TAB3Q8N5C8 712 aaPredicted RBP11.97□□□□□ -0.49
CLN6-217ENST00000636964 GRK7Q8WTQ7 553 aa11.97□□□□□ -0.49
CLN6-217ENST00000636964 ART4Q93070 314 aa11.97□□□□□ -0.49
CLN6-217ENST00000636964 GLT1D1Q96MS3 346 aa11.97□□□□□ -0.49
CLN6-217ENST00000636964 TMEM121Q9BTD3 319 aa11.97□□□□□ -0.49
CLN6-217ENST00000636964 ZCWPW1Q9H0M4 648 aa11.97□□□□□ -0.49
CLN6-217ENST00000636964 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.97□□□□□ -0.496e-7■■□□□ 13.2
CLN6-217ENST00000636964 DDX43Q9NXZ2 648 aaKnown RBP11.97□□□□□ -0.49
CLN6-217ENST00000636964 ZMYND8Q9ULU4 1186 aaPredicted RBP11.97□□□□□ -0.49
CLN6-217ENST00000636964 INHAP05111 366 aa11.96□□□□□ -0.49
CLN6-217ENST00000636964 PTPN1P18031 435 aaKnown RBP11.96□□□□□ -0.49
CLN6-217ENST00000636964 IVDP26440 423 aa11.96□□□□□ -0.49
CLN6-217ENST00000636964 CST5P28325 142 aaPredicted RBP11.96□□□□□ -0.49
CLN6-217ENST00000636964 ITGA8P53708 1063 aa11.96□□□□□ -0.49
CLN6-217ENST00000636964 PMS2P54278 862 aa11.96□□□□□ -0.49
CLN6-217ENST00000636964 BCAT1P54687 386 aa11.96□□□□□ -0.49
CLN6-217ENST00000636964 ITIH4Q14624 930 aa11.96□□□□□ -0.49
CLN6-217ENST00000636964 MAP3K21Q5TCX8 1036 aa11.96□□□□□ -0.49
CLN6-217ENST00000636964 POLNQ7Z5Q5 900 aa11.96□□□□□ -0.49
CLN6-217ENST00000636964 RFX6Q8HWS3 928 aa11.96□□□□□ -0.49
CLN6-217ENST00000636964 FAM172AQ8WUF8 416 aa11.96□□□□□ -0.49
CLN6-217ENST00000636964 CENPTQ96BT3 561 aa11.96□□□□□ -0.49
CLN6-217ENST00000636964 TNIP3Q96KP6 325 aa11.96□□□□□ -0.49
CLN6-217ENST00000636964 MED10Q9BTT4 135 aa11.96□□□□□ -0.49
CLN6-217ENST00000636964 MAGEB5Q9BZ81 275 aa11.96□□□□□ -0.49
CLN6-217ENST00000636964 SLC38A7Q9NVC3 462 aa11.96□□□□□ -0.49
CLN6-217ENST00000636964 NKX1-2Q9UD57 310 aaPredicted RBP11.96□□□□□ -0.49
CLN6-217ENST00000636964 MTRF1LQ9UGC7 380 aaKnown RBP11.96□□□□□ -0.49
CLN6-217ENST00000636964 F8W810 466 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms