RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 PQLC3Q8N755 202 aa14.56□□□□□ -0.08
CACNA1A-228ENST00000636610 SCG3Q8WXD2 468 aaKnown RBP14.56□□□□□ -0.08
CACNA1A-228ENST00000636610 CCDC124Q96CT7 223 aaKnown RBP14.56□□□□□ -0.08
CACNA1A-228ENST00000636610 PLAC1Q9HBJ0 212 aa14.56□□□□□ -0.08
CACNA1A-228ENST00000636610 ETNK2Q9NVF9 386 aa14.56□□□□□ -0.08
CACNA1A-228ENST00000636610 TTLL3Q9Y4R7 772 aa14.56□□□□□ -0.08
CACNA1A-228ENST00000636610 C2CD4BA6NLJ0 364 aa14.56□□□□□ -0.08
CACNA1A-228ENST00000636610 NVLO15381 856 aaKnown RBP14.56□□□□□ -0.08
CACNA1A-228ENST00000636610 INSRRP14616 1297 aa14.56□□□□□ -0.08
CACNA1A-228ENST00000636610 NEK3P51956 506 aa14.56□□□□□ -0.08
CACNA1A-228ENST00000636610 AP3M2P53677 418 aa14.56□□□□□ -0.08
CACNA1A-228ENST00000636610 MBTD1Q05BQ5 628 aa14.56□□□□□ -0.08
CACNA1A-228ENST00000636610 SLC10A6Q3KNW5 377 aa14.56□□□□□ -0.08
CACNA1A-228ENST00000636610 TMEM154Q6P9G4 183 aa14.56□□□□□ -0.08
CACNA1A-228ENST00000636610 DNERQ8NFT8 737 aa14.56□□□□□ -0.08
CACNA1A-228ENST00000636610 CFAP61Q8NHU2 1237 aa14.56□□□□□ -0.08
CACNA1A-228ENST00000636610 NLRP7Q8WX94 980 aa14.56□□□□□ -0.08
CACNA1A-228ENST00000636610 E2F7Q96AV8 911 aa14.56□□□□□ -0.08
CACNA1A-228ENST00000636610 PTCD3Q96EY7 689 aaKnown RBP14.56□□□□□ -0.08
CACNA1A-228ENST00000636610 LGMNQ99538 433 aa14.56□□□□□ -0.08
CACNA1A-228ENST00000636610 SYT15Q9BQS2 421 aa14.56□□□□□ -0.08
CACNA1A-228ENST00000636610 EME2A4GXA9 379 aaPredicted RBP14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 ICAM3P32942 547 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 ABCD1P33897 745 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 SLC10A2Q12908 348 aaPredicted RBP14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 PPP2R5DQ14738 602 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 EML3Q32P44 896 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 LBX2Q6XYB7 198 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 TSHZ1Q6ZSZ6 1077 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 TEX9Q8N6V9 391 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 RBM15BQ8NDT2 890 aaKnown RBP14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 KIF12Q96FN5 646 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 MRPL45Q9BRJ2 306 aaKnown RBP14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 CNPY3Q9BT09 278 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 CYP4F11Q9HBI6 524 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 TRIP11Q15643 1979 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 APOL1O14791 398 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 ZMPSTE24O75844 475 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 KRT37O76014 449 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 NPTXRO95502 500 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 SNRPAP09012 282 aaKnown RBP14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 UBTFL6P0CB48 400 aaPredicted RBP14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 PTPN7P35236 360 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 TTLL12Q14166 644 aaPredicted RBP14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 PPP1R2P3Q6NXS1 205 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 DEPDC1BQ8WUY9 529 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 LHX5Q9H2C1 402 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 DPEP3Q9H4B8 488 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 PTPRHQ9HD43 1115 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 G3BP2Q9UN86 482 aaKnown RBP14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 LOC100653049A0A140TA62 436 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 WDR27A2RRH5 827 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 PRR5-ARHGAP8B1AHC4 643 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 B4GALT4O60513 344 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 USP12O75317 370 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 LGR5O75473 907 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 KRT34O76011 436 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 ARF4P18085 180 aaPredicted RBP14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 SDC4P31431 198 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 STIP1P31948 543 aaKnown RBP14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 ARHGAP8P85298 464 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 BLMHQ13867 455 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 PPM1JQ5JR12 505 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 THEMIS2Q5TEJ8 643 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 VWA5B1Q5TIE3 1220 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 TTC39BQ5VTQ0 682 aaPredicted RBP14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 TP53INP2Q8IXH6 220 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 SKA1Q96BD8 255 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 MCRS1Q96EZ8 462 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 DCLRE1BQ9H816 532 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 PIDD1Q9HB75 910 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 IFT122Q9HBG6 1241 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 POPDC2Q9HBU9 364 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 PCDH18Q9HCL0 1135 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 ZNF358Q9NW07 568 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 ZFATQ9P243 1243 aa14.55□□□□□ -0.08
CACNA1A-228ENST00000636610 ARHGAP42A6NI28 874 aa14.54□□□□□ -0.08
CACNA1A-228ENST00000636610 ADM5C9JUS6 153 aa14.54□□□□□ -0.08
CACNA1A-228ENST00000636610 LINGO3P0C6S8 592 aa14.54□□□□□ -0.08
CACNA1A-228ENST00000636610 EPHB1P54762 984 aa14.54□□□□□ -0.08
CACNA1A-228ENST00000636610 TMEM132DQ14C87 1099 aa14.54□□□□□ -0.08
CACNA1A-228ENST00000636610 RNF220Q5VTB9 566 aa14.54□□□□□ -0.08
CACNA1A-228ENST00000636610 TTC30AQ86WT1 665 aa14.54□□□□□ -0.08
CACNA1A-228ENST00000636610 FAM131BQ86XD5 332 aa14.54□□□□□ -0.08
CACNA1A-228ENST00000636610 CHST13Q8NET6 341 aa14.54□□□□□ -0.08
CACNA1A-228ENST00000636610 OR6B3Q8NGW1 331 aa14.54□□□□□ -0.08
CACNA1A-228ENST00000636610 AGAP3Q96P47 875 aa14.54□□□□□ -0.08
CACNA1A-228ENST00000636610 SLC15A5A6NIM6 579 aa14.54□□□□□ -0.08
CACNA1A-228ENST00000636610 ITM2AO43736 263 aa14.54□□□□□ -0.08
CACNA1A-228ENST00000636610 RFPL1O75677 317 aa14.54□□□□□ -0.08
CACNA1A-228ENST00000636610 ZCCHC18P0CG32 403 aa14.54□□□□□ -0.08
CACNA1A-228ENST00000636610 CCDC130P13994 396 aa14.54□□□□□ -0.08
CACNA1A-228ENST00000636610 CYP2F1P24903 491 aa14.54□□□□□ -0.08
CACNA1A-228ENST00000636610 SLC18A1P54219 525 aa14.54□□□□□ -0.08
CACNA1A-228ENST00000636610 SLC25A3Q00325 362 aa14.54□□□□□ -0.08
CACNA1A-228ENST00000636610 TFDP2Q14188 446 aa14.54□□□□□ -0.08
CACNA1A-228ENST00000636610 CDCA2Q69YH5 1023 aaPredicted RBP14.54□□□□□ -0.08
CACNA1A-228ENST00000636610 KCNT2Q6UVM3 1135 aa14.54□□□□□ -0.08
CACNA1A-228ENST00000636610 ILDR2Q71H61 639 aa14.54□□□□□ -0.08
CACNA1A-228ENST00000636610 BCO2Q9BYV7 579 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms