RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 SERPINB6P35237 376 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 GABRB2P47870 512 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 EPHB1P54762 984 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 MYL6P60660 151 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 BMPR2Q13873 1038 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 TRIP10Q15642 601 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 MTERF2Q49AM1 385 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 TMEM259Q4ZIN3 620 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 RNF111Q6ZNA4 994 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 GSDMBQ8TAX9 411 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 ACMSDQ8TDX5 336 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 APOL6Q9BWW8 343 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 PORCNQ9H237 461 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 TMEM134Q9H6X4 195 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 DNAJC28Q9NX36 388 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 CTDP1Q9Y5B0 961 aaPredicted RBP15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 FAM159BA6NKW6 160 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 TTLL13PA6NNM8 815 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 SIN3BO75182 1162 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 TMCC1O94876 653 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 PYGLP06737 847 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 PEX2P28328 305 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 RPL5P46777 297 aaKnown RBP15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 DLG1Q12959 904 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 TRPC3Q13507 836 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 SURF1Q15526 300 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 FASTKD1Q53R41 847 aaKnown RBP15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 DPY19L2Q6NUT2 758 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 UGT2A3Q6UWM9 527 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 NLGN1Q8N2Q7 840 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 PPP4R1Q8TF05 950 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 SDCBP2Q9H190 292 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 USP29Q9HBJ7 922 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 JPH1Q9HDC5 661 aaPredicted RBP15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 DNAJC16Q9Y2G8 782 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 ZNF646O15015 1829 aaPredicted RBP15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 SLC15A5A6NIM6 579 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 A6NJR5 290 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 BTBD19C9JJ37 291 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 PROCP04070 461 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 KCNA2P16389 499 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 GRK2P25098 689 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 PRDX6P30041 224 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 GRIA2P42262 883 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 NRLP54845 237 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 DUOXA2Q1HG44 320 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 HSP90AA5PQ58FG0 334 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 POTEAQ6S8J7 498 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 SATL1Q86VE3 508 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 CAND1Q86VP6 1230 aaKnown RBP15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 MAP7D3Q8IWC1 876 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 ATP2A3Q93084 1043 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 CDHR1Q96JP9 859 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 KCNK16Q96T55 309 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 SMYD2Q9NRG4 433 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 ZNF70Q9UC06 446 aaPredicted RBP15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 POMPQ9Y244 141 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 KCNN4O15554 427 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 DENRO43583 198 aaKnown RBP15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 CSH1P0DML2 217 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 CSH2P0DML3 217 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 RAG1P15918 1043 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 SLC1A6P48664 564 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 CDH6P55285 790 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 FOLH1Q04609 750 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 RALGPS1Q5JS13 557 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 MROH9Q5TGP6 573 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 ARMC3Q5W041 872 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 MBLAC2Q68D91 279 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 NPNTQ6UXI9 565 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 UNC5AQ6ZN44 842 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 CYS1Q717R9 158 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 XYLT1Q86Y38 959 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 CCDC60Q8IWA6 550 aaPredicted RBP15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 MARVELD2Q8N4S9 558 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 EMC1Q8N766 993 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 LENG1Q96BZ8 264 aaPredicted RBP15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 ZNF341Q9BYN7 854 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 PLK2Q9NYY3 685 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 C6orf203Q9P0P8 240 aaPredicted RBP15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 CIDEBQ9UHD4 219 aa15.32■□□□□ 0.04
CACNA1A-220ENST00000635988 SF3B1O75533 1304 aaKnown RBP eCLIP15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 CLRN2A0PK11 232 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 TXNDC9O14530 226 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 STRNO43815 780 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 GLRA3O75311 464 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 SERPINE1P05121 402 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 NR3C2P08235 984 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 CD19P15391 556 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 SYCP2LQ5T4T6 812 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 TEDDM1Q5T9Z0 273 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 ZPBP2Q6X784 338 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 ZCCHC23Q6ZST2 131 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 ILDR2Q71H61 639 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 KBTBD6Q86V97 674 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 ALDH16A1Q8IZ83 802 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 ADGRF2Q8IZF7 708 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 FBXW8Q8N3Y1 598 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms