RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 DUSP16Q9BY84 665 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 TSPYL2Q9H2G4 693 aaPredicted RBP4.72□□□□□ -1.65
SCN1A-210ENST00000635776 MANSC1Q9H8J5 431 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 OLA1Q9NTK5 396 aaKnown RBP4.72□□□□□ -1.65
SCN1A-210ENST00000635776 POLIQ9UNA4 740 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 TRIM33Q9UPN9 1127 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 SLX4Q8IY92 1834 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 A0A0A0MRY4 1105 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 KLHL2O95198 593 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 NPR3P17342 541 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 PGAM1P18669 254 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 DRD4P21917 467 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 LRPAP1P30533 357 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 PPARGP37231 505 aaPredicted RBP4.72□□□□□ -1.65
SCN1A-210ENST00000635776 POLD2P49005 469 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 RIPK1Q13546 671 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 THOC5Q13769 683 aaKnown RBP4.72□□□□□ -1.65
SCN1A-210ENST00000635776 MAP7Q14244 749 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 KIZQ2M2Z5 673 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 ANKRD20A8PQ5CZ79 823 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 SPANXN3Q5MJ09 141 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 BRMS1LQ5PSV4 323 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 PPP1R15BQ5SWA1 713 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 ADGRD1Q6QNK2 874 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 BEND5Q7L4P6 421 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 TTC17Q96AE7 1141 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 TBC1D31Q96DN5 1066 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 SPATA13Q96N96 652 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 TSSK1BQ9BXA7 367 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.72□□□□□ -1.65
SCN1A-210ENST00000635776 RNPEPQ9H4A4 650 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 SMYD3Q9H7B4 428 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 ACP6Q9NPH0 428 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 SMIM28A0A1B0GU29 152 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 PSEN1P49768 467 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 TMPRSS15P98073 1019 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 INSCQ1MX18 579 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 CCDC126Q96EE4 140 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 CHORDC1Q9UHD1 332 aaPredicted RBP4.72□□□□□ -1.65
SCN1A-210ENST00000635776 ZFP69BQ9UJL9 534 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 BIRC5O15392 142 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 RECQL4O94761 1208 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 APRTP07741 180 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 TAC1P20366 129 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 DNAJB1P25685 340 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 CEP57Q86XR8 500 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 NUDCD3Q8IVD9 361 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 CLMNQ96JQ2 1002 aa4.72□□□□□ -1.65
SCN1A-210ENST00000635776 ANKRD31Q8N7Z5 1873 aa4.71□□□□□ -1.65
SCN1A-210ENST00000635776 CNMDO75829 334 aa4.71□□□□□ -1.65
SCN1A-210ENST00000635776 ESRRAP11474 423 aaPredicted RBP4.71□□□□□ -1.65
SCN1A-210ENST00000635776 MRPS5P82675 430 aaKnown RBP4.71□□□□□ -1.65
SCN1A-210ENST00000635776 MGAT5Q09328 741 aa4.71□□□□□ -1.65
SCN1A-210ENST00000635776 DPYSL2Q16555 572 aa4.71□□□□□ -1.65
SCN1A-210ENST00000635776 FSCN1Q16658 493 aaKnown RBP4.71□□□□□ -1.65
SCN1A-210ENST00000635776 STXBP5Q5T5C0 1151 aa4.71□□□□□ -1.65
SCN1A-210ENST00000635776 PAF1Q8N7H5 531 aa4.71□□□□□ -1.65
SCN1A-210ENST00000635776 COPS5Q92905 334 aa4.71□□□□□ -1.65
SCN1A-210ENST00000635776 TSPAN17Q96FV3 270 aa4.71□□□□□ -1.65
SCN1A-210ENST00000635776 CPXM1Q96SM3 734 aa4.71□□□□□ -1.65
SCN1A-210ENST00000635776 OSMRQ99650 979 aa4.71□□□□□ -1.65
SCN1A-210ENST00000635776 VCXQ9H320 206 aa4.71□□□□□ -1.65
SCN1A-210ENST00000635776 BATF3Q9NR55 127 aa4.71□□□□□ -1.65
SCN1A-210ENST00000635776 FAM49BQ9NUQ9 324 aa4.71□□□□□ -1.65
SCN1A-210ENST00000635776 RGS17Q9UGC6 210 aaPredicted RBP4.71□□□□□ -1.65
SCN1A-210ENST00000635776 PHTF1Q9UMS5 762 aa4.71□□□□□ -1.65
SCN1A-210ENST00000635776 TYMPP19971 482 aa4.71□□□□□ -1.65
SCN1A-210ENST00000635776 RGS7P49802 495 aa4.71□□□□□ -1.65
SCN1A-210ENST00000635776 MRPS6P82932 125 aaKnown RBP4.71□□□□□ -1.65
SCN1A-210ENST00000635776 SIX1Q15475 284 aaPredicted RBP4.71□□□□□ -1.65
SCN1A-210ENST00000635776 ICE2Q659A1 982 aa4.71□□□□□ -1.65
SCN1A-210ENST00000635776 SPATA2LQ8IUW3 424 aaPredicted RBP4.71□□□□□ -1.65
SCN1A-210ENST00000635776 MFN1Q8IWA4 741 aa4.71□□□□□ -1.65
SCN1A-210ENST00000635776 ZNF526Q8TF50 670 aaPredicted RBP4.71□□□□□ -1.65
SCN1A-210ENST00000635776 TRAPPC12Q8WVT3 735 aa4.71□□□□□ -1.65
SCN1A-210ENST00000635776 GLT1D1Q96MS3 346 aa4.71□□□□□ -1.65
SCN1A-210ENST00000635776 FBXO44Q9H4M3 255 aa4.71□□□□□ -1.65
SCN1A-210ENST00000635776 NRDE2Q9H7Z3 1164 aa4.71□□□□□ -1.65
SCN1A-210ENST00000635776 GEMIN8Q9NWZ8 242 aaKnown RBP4.71□□□□□ -1.65
SCN1A-210ENST00000635776 COL11A2P13942 1736 aaPredicted RBP4.71□□□□□ -1.66
SCN1A-210ENST00000635776 GCATO75600 419 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 PTPN1P18031 435 aaKnown RBP4.71□□□□□ -1.66
SCN1A-210ENST00000635776 PRMT2P55345 433 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 ZKSCAN8Q15776 578 aaPredicted RBP4.71□□□□□ -1.66
SCN1A-210ENST00000635776 KLC3Q6P597 504 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 DNAAF5Q86Y56 855 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 EMC1Q8N766 993 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 RILPQ96NA2 401 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 SERPINB11Q96P15 392 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 RETREG1Q9H6L5 497 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 TRPC7Q9HCX4 862 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 DMAP1Q9NPF5 467 aaPredicted RBP4.71□□□□□ -1.66
SCN1A-210ENST00000635776 ETNK2Q9NVF9 386 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 E7ESA3 106 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 F8W8V4 182 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 GP5P40197 560 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 CSE1LP55060 971 aaKnown RBP4.71□□□□□ -1.66
SCN1A-210ENST00000635776 GRIK3Q13003 919 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 TAF12Q16514 161 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 Q3C1V9 767 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms