RNA–Protein interactions for RNA: ENST00000635751.1

CLN8-208, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-208ENST00000635751 ODF2Q5BJF6 829 aa20.82■□□□□ 0.92
CLN8-208ENST00000635751 PPP2R2DQ66LE6 453 aa20.82■□□□□ 0.92
CLN8-208ENST00000635751 ATAD1Q8NBU5 361 aa20.82■□□□□ 0.92
CLN8-208ENST00000635751 GRK7Q8WTQ7 553 aa20.82■□□□□ 0.92
CLN8-208ENST00000635751 C1orf54Q8WWF1 131 aa20.82■□□□□ 0.92
CLN8-208ENST00000635751 CPXM1Q96SM3 734 aa20.82■□□□□ 0.92
CLN8-208ENST00000635751 KCNK16Q96T55 309 aa20.82■□□□□ 0.92
CLN8-208ENST00000635751 SMOQ99835 787 aa20.82■□□□□ 0.92
CLN8-208ENST00000635751 TCF25Q9BQ70 676 aa20.82■□□□□ 0.92
CLN8-208ENST00000635751 PARVAQ9NVD7 372 aa20.82■□□□□ 0.92
CLN8-208ENST00000635751 WHRNQ9P202 907 aa20.82■□□□□ 0.92
CLN8-208ENST00000635751 TJP2Q9UDY2 1190 aa20.82■□□□□ 0.92
CLN8-208ENST00000635751 NOVA2Q9UNW9 492 aaKnown RBP20.82■□□□□ 0.92
CLN8-208ENST00000635751 PCDHB5Q9Y5E4 795 aa20.82■□□□□ 0.92
CLN8-208ENST00000635751 NDUFAB1O14561 156 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 SETSIPP0DME0 302 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 MMP8P22894 467 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 SLC8A3P57103 927 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 PPP2R2AP63151 447 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 PTPN20Q4JDL3 420 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 CROCCP2Q86T23 111 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 GPR65Q8IYL9 337 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 KATNAL2Q8IYT4 538 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 SLC28A3Q9HAS3 691 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 ENTPD7Q9NQZ7 604 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 HOMER3Q9NSC5 361 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 LCMT1Q9UIC8 334 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 SSX2IPQ9Y2D8 614 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 PATJQ8NI35 1801 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 ATG2AQ2TAZ0 1938 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 CDH23Q9H251 3354 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 MTMR11A4FU01 709 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 MYO1CO00159 1063 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 PIK3R2O00459 728 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 VNN2O95498 520 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 UBE3AQ05086 875 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 GPM6BQ13491 265 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 SKIDA1Q1XH10 827 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 ZMIZ2Q8NF64 920 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 FEZF2Q8TBJ5 459 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 RNF25Q96BH1 459 aaPredicted RBP20.81■□□□□ 0.92
CLN8-208ENST00000635751 TLCD1Q96CP7 247 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 FAM107BQ9H098 131 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 RABEP2Q9H5N1 569 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 TLR9Q9NR96 1032 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.81■□□□□ 0.92
CLN8-208ENST00000635751 FNIP2Q9P278 1114 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 SLC12A6Q9UHW9 1150 aa20.81■□□□□ 0.92
CLN8-208ENST00000635751 FEZ2Q9UHY8 353 aaPredicted RBP20.81■□□□□ 0.92
CLN8-208ENST00000635751 PLXNA3P51805 1871 aa20.8■□□□□ 0.92
CLN8-208ENST00000635751 ZNF638Q14966 1978 aaKnown RBP20.8■□□□□ 0.92
CLN8-208ENST00000635751 MTCL1Q9Y4B5 1905 aaKnown RBP20.8■□□□□ 0.92
CLN8-208ENST00000635751 XPO1O14980 1071 aaKnown RBP20.8■□□□□ 0.92
CLN8-208ENST00000635751 TEX28O15482 410 aa20.8■□□□□ 0.92
CLN8-208ENST00000635751 RARGP13631 454 aa20.8■□□□□ 0.92
CLN8-208ENST00000635751 SNX1Q13596 522 aa20.8■□□□□ 0.92
CLN8-208ENST00000635751 CYP4A22Q5TCH4 519 aa20.8■□□□□ 0.92
CLN8-208ENST00000635751 PLPP4Q5VZY2 271 aa20.8■□□□□ 0.92
CLN8-208ENST00000635751 PIGZQ86VD9 579 aa20.8■□□□□ 0.92
CLN8-208ENST00000635751 CCDC50Q8IVM0 306 aa20.8■□□□□ 0.92
CLN8-208ENST00000635751 FUBP3Q96I24 572 aaKnown RBP eCLIP20.8■□□□□ 0.92
CLN8-208ENST00000635751 DCLK3Q9C098 648 aa20.8■□□□□ 0.92
CLN8-208ENST00000635751 SYNCQ9H7C4 482 aa20.8■□□□□ 0.92
CLN8-208ENST00000635751 RXFP1Q9HBX9 757 aa20.8■□□□□ 0.92
CLN8-208ENST00000635751 CSNK1G1Q9HCP0 422 aa20.8■□□□□ 0.92
CLN8-208ENST00000635751 SLC27A5Q9Y2P5 690 aa20.8■□□□□ 0.92
CLN8-208ENST00000635751 GREB1Q4ZG55 1949 aa20.8■□□□□ 0.92
CLN8-208ENST00000635751 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.79■□□□□ 0.92
CLN8-208ENST00000635751 H3BNC9 293 aa20.79■□□□□ 0.92
CLN8-208ENST00000635751 GAS8O95995 478 aa20.79■□□□□ 0.92
CLN8-208ENST00000635751 SHBGP04278 402 aa20.79■□□□□ 0.92
CLN8-208ENST00000635751 CALB1P05937 261 aa20.79■□□□□ 0.92
CLN8-208ENST00000635751 CNPP09543 421 aaKnown RBP20.79■□□□□ 0.92
CLN8-208ENST00000635751 GRIK1P39086 918 aa20.79■□□□□ 0.92
CLN8-208ENST00000635751 MAGOHP61326 146 aaKnown RBP20.79■□□□□ 0.92
CLN8-208ENST00000635751 ADCY1Q08828 1119 aa20.79■□□□□ 0.92
CLN8-208ENST00000635751 SMARCB1Q12824 385 aa20.79■□□□□ 0.92
CLN8-208ENST00000635751 PTK6Q13882 451 aa20.79■□□□□ 0.92
CLN8-208ENST00000635751 CAMK1Q14012 370 aa20.79■□□□□ 0.92
CLN8-208ENST00000635751 LLGL1Q15334 1064 aa20.79■□□□□ 0.92
CLN8-208ENST00000635751 TTC9BQ8N6N2 239 aa20.79■□□□□ 0.92
CLN8-208ENST00000635751 EXD1Q8NHP7 514 aa20.79■□□□□ 0.92
CLN8-208ENST00000635751 SPPL2BQ8TCT7 592 aa20.79■□□□□ 0.92
CLN8-208ENST00000635751 MICAL1Q8TDZ2 1067 aa20.79■□□□□ 0.92
CLN8-208ENST00000635751 STK32AQ8WU08 396 aa20.79■□□□□ 0.92
CLN8-208ENST00000635751 ARNTL2Q8WYA1 636 aa20.79■□□□□ 0.92
CLN8-208ENST00000635751 SLC4A5Q9BY07 1137 aa20.79■□□□□ 0.92
CLN8-208ENST00000635751 CRISPLD1Q9H336 500 aa20.79■□□□□ 0.92
CLN8-208ENST00000635751 IP6K2Q9UHH9 426 aa20.79■□□□□ 0.92
CLN8-208ENST00000635751 GABBR2O75899 941 aa20.78■□□□□ 0.92
CLN8-208ENST00000635751 ERBB2P04626 1255 aa20.78■□□□□ 0.92
CLN8-208ENST00000635751 ITIH2P19823 946 aa20.78■□□□□ 0.92
CLN8-208ENST00000635751 TAS2R40P59535 323 aa20.78■□□□□ 0.92
CLN8-208ENST00000635751 DUSP4Q13115 394 aa20.78■□□□□ 0.92
CLN8-208ENST00000635751 SLC29A2Q14542 456 aa20.78■□□□□ 0.92
CLN8-208ENST00000635751 SCN4BQ8IWT1 228 aa20.78■□□□□ 0.92
CLN8-208ENST00000635751 ZNF461Q8TAF7 563 aa20.78■□□□□ 0.92
CLN8-208ENST00000635751 PGM2Q96G03 612 aa20.78■□□□□ 0.92
CLN8-208ENST00000635751 SNF8Q96H20 258 aa20.78■□□□□ 0.92
CLN8-208ENST00000635751 SEMA4AQ9H3S1 761 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms