RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 NR1H2P55055 460 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 ORC1Q13415 861 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 NFYCQ13952 458 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 SLC45A4Q5BKX6 768 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 SEPT12Q8IYM1 358 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 SVOPQ8N4V2 548 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 CCDC33Q8N5R6 958 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 FNIP1Q8TF40 1166 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 RORBQ92753 470 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 ZNF333Q96JL9 665 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 PNMA5Q96PV4 448 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 CRAMP1Q96RY5 1269 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 MTMR12Q9C0I1 747 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 CHST12Q9NRB3 414 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 THAP1Q9NVV9 213 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 SIK3Q9Y2K2 1263 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 LMTK2Q8IWU2 1503 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 FAM237AA0A1B0GTK4 181 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 PEX1O43933 1283 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 ATP5BP06576 529 aaKnown RBP12□□□□□ -0.49
COL11A1-211ENST00000635193 RARBP10826 455 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 NCAM1P13591 858 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 SSTR1P30872 391 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 NNMTP40261 264 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 GJA8P48165 433 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 CCT3P49368 545 aaKnown RBP12□□□□□ -0.49
COL11A1-211ENST00000635193 SPANXN2Q5MJ10 180 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 N4BP2L1Q5TBK1 243 aaPredicted RBP12□□□□□ -0.49
COL11A1-211ENST00000635193 XRRA1Q6P2D8 792 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 EFHBQ8N7U6 833 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 UBASH3BQ8TF42 649 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 SRPK1Q96SB4 655 aaKnown RBP12□□□□□ -0.49
COL11A1-211ENST00000635193 KLHL3Q9UH77 587 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 POLIQ9UNA4 740 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 PMPCBO75439 489 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 LSM8O95777 96 aaKnown RBP12□□□□□ -0.49
COL11A1-211ENST00000635193 SHBGP04278 402 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 SERPINE1P05121 402 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 HSMCR30P0CW71 290 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 JAK1P23458 1154 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 CYP24A1Q07973 514 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 PTRHD1Q6GMV3 140 aaKnown RBP12□□□□□ -0.49
COL11A1-211ENST00000635193 PKN3Q6P5Z2 889 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 SMIM5Q71RC9 77 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 APOBEC3FQ8IUX4 373 aaKnown RBP12□□□□□ -0.49
COL11A1-211ENST00000635193 CENPLQ8N0S6 344 aaPredicted RBP12□□□□□ -0.49
COL11A1-211ENST00000635193 POU5F2Q8N7G0 328 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 SNX31Q8N9S9 440 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 FAM172AQ8WUF8 416 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 TBC1D10AQ9BXI6 508 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 UBE2OQ9C0C9 1292 aaKnown RBP12□□□□□ -0.49
COL11A1-211ENST00000635193 LRMDAQ9H2I8 198 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 SH3GLB1Q9Y371 365 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 NR5A2O00482 541 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 MAGEB2O15479 319 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 ENTPD5O75356 428 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 ALADP13716 330 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 ETS2P15036 469 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 CHRM3P20309 590 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 PSMC6P62333 389 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 CDC42EP1Q00587 391 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 SV2CQ496J9 727 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 TRIQKQ629K1 86 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 RNF43Q68DV7 783 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 RBM44Q6ZP01 1051 aaKnown RBP12□□□□□ -0.49
COL11A1-211ENST00000635193 ENKURQ8TC29 256 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 GANCQ8TET4 914 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 TAAR1Q96RJ0 339 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 FHDC1Q9C0D6 1143 aaPredicted RBP12□□□□□ -0.49
COL11A1-211ENST00000635193 KIAA1683Q9H0B3 1180 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 DNAJC18Q9H819 358 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 CYP4F12Q9HCS2 524 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 VTA1Q9NP79 307 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 NCKIPSDQ9NZQ3 722 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 STARD13Q9Y3M8 1113 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 ARIH2O95376 493 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 KLRK1P26718 216 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 NET1Q7Z628 596 aaPredicted RBP12□□□□□ -0.49
COL11A1-211ENST00000635193 ARHGEF19Q8IW93 802 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 OSCP1Q8WVF1 389 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 EZH1Q92800 747 aaPredicted RBP12□□□□□ -0.49
COL11A1-211ENST00000635193 SLC35C1Q96A29 364 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 CGRRF1Q99675 332 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 APOL4Q9BPW4 351 aa12□□□□□ -0.49
COL11A1-211ENST00000635193 SPRTNQ9H040 489 aaPredicted RBP12□□□□□ -0.49
COL11A1-211ENST00000635193 COPS7BQ9H9Q2 264 aaPredicted RBP12□□□□□ -0.49
COL11A1-211ENST00000635193 M0QYT0 321 aa11.99□□□□□ -0.49
COL11A1-211ENST00000635193 IDH3BO43837 385 aa11.99□□□□□ -0.49
COL11A1-211ENST00000635193 VDRP11473 427 aa11.99□□□□□ -0.49
COL11A1-211ENST00000635193 CDH3P22223 829 aa11.99□□□□□ -0.49
COL11A1-211ENST00000635193 ME2P23368 584 aa11.99□□□□□ -0.49
COL11A1-211ENST00000635193 ADRA1DP25100 572 aa11.99□□□□□ -0.49
COL11A1-211ENST00000635193 GEMP55040 296 aa11.99□□□□□ -0.49
COL11A1-211ENST00000635193 TRAF3Q13114 568 aa11.99□□□□□ -0.49
COL11A1-211ENST00000635193 PDZK1Q5T2W1 519 aa11.99□□□□□ -0.49
COL11A1-211ENST00000635193 IL31Q6EBC2 164 aa11.99□□□□□ -0.49
COL11A1-211ENST00000635193 KBTBD2Q8IY47 623 aa11.99□□□□□ -0.49
COL11A1-211ENST00000635193 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.99□□□□□ -0.49
COL11A1-211ENST00000635193 TSPAN14Q8NG11 270 aa11.99□□□□□ -0.49
COL11A1-211ENST00000635193 BTN2A2Q8WVV5 523 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms