RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 EDEM1Q92611 657 aa15.11■□□□□ 0.01
LINC00339-208ENST00000634934 LRRC3Q9BY71 257 aa15.11■□□□□ 0.01
LINC00339-208ENST00000634934 NMUR1Q9HB89 426 aa15.11■□□□□ 0.01
LINC00339-208ENST00000634934 ASNSD1Q9NWL6 643 aa15.11■□□□□ 0.01
LINC00339-208ENST00000634934 THEGQ9P2T0 379 aa15.11■□□□□ 0.01
LINC00339-208ENST00000634934 ZNF840PA6NDX5 716 aa15.1■□□□□ 0.01
LINC00339-208ENST00000634934 ERLIN1O75477 346 aa15.1■□□□□ 0.01
LINC00339-208ENST00000634934 F11P03951 625 aa15.1■□□□□ 0.01
LINC00339-208ENST00000634934 GLI1P08151 1106 aa15.1■□□□□ 0.01
LINC00339-208ENST00000634934 MCM3P25205 808 aa15.1■□□□□ 0.01
LINC00339-208ENST00000634934 CDC25CP30307 473 aa15.1■□□□□ 0.01
LINC00339-208ENST00000634934 NOP2P46087 812 aaKnown RBP15.1■□□□□ 0.01
LINC00339-208ENST00000634934 PPP3CCP48454 512 aa15.1■□□□□ 0.01
LINC00339-208ENST00000634934 KCNQ1P51787 676 aa15.1■□□□□ 0.01
LINC00339-208ENST00000634934 NAP1L1P55209 391 aaKnown RBP15.1■□□□□ 0.01
LINC00339-208ENST00000634934 RPL7AP62424 266 aaKnown RBP15.1■□□□□ 0.01
LINC00339-208ENST00000634934 AMPD2Q01433 879 aa15.1■□□□□ 0.01
LINC00339-208ENST00000634934 GPR149Q86SP6 731 aa15.1■□□□□ 0.01
LINC00339-208ENST00000634934 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.1■□□□□ 0.01
LINC00339-208ENST00000634934 JOSD2Q8TAC2 188 aa15.1■□□□□ 0.01
LINC00339-208ENST00000634934 SLC35G2Q8TBE7 412 aa15.1■□□□□ 0.01
LINC00339-208ENST00000634934 ZNF564Q8TBZ8 553 aaPredicted RBP15.1■□□□□ 0.01
LINC00339-208ENST00000634934 RFFLQ8WZ73 363 aa15.1■□□□□ 0.01
LINC00339-208ENST00000634934 RUBCNQ92622 972 aa15.1■□□□□ 0.01
LINC00339-208ENST00000634934 KHSRPQ92945 711 aaKnown RBP eCLIP15.1■□□□□ 0.01
LINC00339-208ENST00000634934 FUT8Q9BYC5 575 aa15.1■□□□□ 0.01
LINC00339-208ENST00000634934 PARD6BQ9BYG5 372 aa15.1■□□□□ 0.01
LINC00339-208ENST00000634934 ATXN3LQ9H3M9 355 aa15.1■□□□□ 0.01
LINC00339-208ENST00000634934 IL21Q9HBE4 155 aa15.1■□□□□ 0.01
LINC00339-208ENST00000634934 POPDC2Q9HBU9 364 aa15.1■□□□□ 0.01
LINC00339-208ENST00000634934 LZTFL1Q9NQ48 299 aa15.1■□□□□ 0.01
LINC00339-208ENST00000634934 OSER1Q9NX31 292 aa15.1■□□□□ 0.01
LINC00339-208ENST00000634934 UVRAGQ9P2Y5 699 aa15.1■□□□□ 0.01
LINC00339-208ENST00000634934 TRIM10Q9UDY6 481 aa15.1■□□□□ 0.01
LINC00339-208ENST00000634934 TMEM59LQ9UK28 342 aa15.1■□□□□ 0.01
LINC00339-208ENST00000634934 DUSP10Q9Y6W6 482 aa15.1■□□□□ 0.01
LINC00339-208ENST00000634934 A0A1W2PRU2 124 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 PJA2O43164 708 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 DAB1O75553 588 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 FGF19O95750 216 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 ZDHHC11BP0C7U3 371 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 RALAP11233 206 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 NCAM1P13591 858 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 RARGP13631 454 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 GJA1P17302 382 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 RFC1P35251 1148 aaPredicted RBP15.09■□□□□ 0.01
LINC00339-208ENST00000634934 PSEN1P49768 467 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 CYP4F8P98187 520 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 DCAF6Q58WW2 860 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 PPP1R15BQ5SWA1 713 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 CES5AQ6NT32 575 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 WDR93Q6P2C0 686 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 GAREM2Q75VX8 874 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 TMEM150AQ86TG1 271 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 RHOT2Q8IXI1 618 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 DEFB106AQ8N104 65 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 LEMD2Q8NC56 503 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 RNF139Q8WU17 664 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 MRPS31Q92665 395 aaKnown RBP15.09■□□□□ 0.01
LINC00339-208ENST00000634934 TCEAL4Q96EI5 215 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 TRIM62Q9BVG3 475 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 TSGA10Q9BZW7 698 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 ADAM7Q9H2U9 754 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 OSGEPQ9NPF4 335 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 ABCC13Q9NSE7 274 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.09■□□□□ 0.01
LINC00339-208ENST00000634934 CDH22Q9UJ99 828 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 ANAPC7Q9UJX3 599 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 NUDT5Q9UKK9 219 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 COG5Q9UP83 839 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 NAALADL1Q9UQQ1 740 aa15.09■□□□□ 0.01
LINC00339-208ENST00000634934 MACROD2A1Z1Q3 448 aa15.08■□□□□ 0.01
LINC00339-208ENST00000634934 TMEM191CA6NGB0 347 aa15.08■□□□□ 0.01
LINC00339-208ENST00000634934 KRT86O43790 486 aa15.08■□□□□ 0.01
LINC00339-208ENST00000634934 PAPLNO95428 1278 aa15.08■□□□□ 0.01
LINC00339-208ENST00000634934 FYNP06241 537 aa15.08■□□□□ 0.01
LINC00339-208ENST00000634934 PDGFRAP16234 1089 aa15.08■□□□□ 0.01
LINC00339-208ENST00000634934 FLT3P36888 993 aa15.08■□□□□ 0.01
LINC00339-208ENST00000634934 CCR2P41597 374 aa15.08■□□□□ 0.01
LINC00339-208ENST00000634934 EPHA5P54756 1037 aa15.08■□□□□ 0.01
LINC00339-208ENST00000634934 ITIH3Q06033 890 aa15.08■□□□□ 0.01
LINC00339-208ENST00000634934 ATAT1Q5SQI0 421 aa15.08■□□□□ 0.01
LINC00339-208ENST00000634934 HECTD3Q5T447 861 aa15.08■□□□□ 0.01
LINC00339-208ENST00000634934 SYPL2Q5VXT5 272 aa15.08■□□□□ 0.01
LINC00339-208ENST00000634934 ZNF771Q7L3S4 317 aaPredicted RBP15.08■□□□□ 0.01
LINC00339-208ENST00000634934 SHKBP1Q8TBC3 707 aa15.08■□□□□ 0.01
LINC00339-208ENST00000634934 RXFP2Q8WXD0 754 aa15.08■□□□□ 0.01
LINC00339-208ENST00000634934 BTBD6Q96KE9 485 aa15.08■□□□□ 0.01
LINC00339-208ENST00000634934 MSLNLQ96KJ4 702 aa15.08■□□□□ 0.01
LINC00339-208ENST00000634934 SLC2A13Q96QE2 648 aa15.08■□□□□ 0.01
LINC00339-208ENST00000634934 TRIM7Q9C029 511 aa15.08■□□□□ 0.01
LINC00339-208ENST00000634934 NACA2Q9H009 215 aa15.08■□□□□ 0.01
LINC00339-208ENST00000634934 CCSER2Q9H7U1 834 aa15.08■□□□□ 0.01
LINC00339-208ENST00000634934 TRPC7Q9HCX4 862 aa15.08■□□□□ 0.01
LINC00339-208ENST00000634934 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.08■□□□□ 0.01
LINC00339-208ENST00000634934 CLIC5Q9NZA1 410 aa15.08■□□□□ 0.01
LINC00339-208ENST00000634934 GUCA1BQ9UMX6 200 aa15.08■□□□□ 0.01
LINC00339-208ENST00000634934 MRPS23Q9Y3D9 190 aaKnown RBP15.08■□□□□ 0.01
LINC00339-208ENST00000634934 A0A0A6YYK5 440 aaPredicted RBP15.07■□□□□ 0
LINC00339-208ENST00000634934 C2CD4BA6NLJ0 364 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms