RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 TICAM2Q86XR7 235 aa5.72□□□□□ -1.49
TRAPPC9-216ENST00000634178 SYT12Q8IV01 421 aa5.72□□□□□ -1.49
TRAPPC9-216ENST00000634178 SUGP1Q8IWZ8 645 aaKnown RBP5.72□□□□□ -1.49
TRAPPC9-216ENST00000634178 FUKQ8N0W3 1084 aa5.72□□□□□ -1.49
TRAPPC9-216ENST00000634178 NSUN7Q8NE18 718 aaKnown RBP5.72□□□□□ -1.49
TRAPPC9-216ENST00000634178 MBD3L2Q8NHZ7 208 aaPredicted RBP5.72□□□□□ -1.49
TRAPPC9-216ENST00000634178 AFG1LQ8WV93 481 aa5.72□□□□□ -1.49
TRAPPC9-216ENST00000634178 GNRHR2Q96P88 292 aa5.72□□□□□ -1.49
TRAPPC9-216ENST00000634178 TRAPPC9Q96Q05 1148 aa5.72□□□□□ -1.49
TRAPPC9-216ENST00000634178 HIST1H2AAQ96QV6 131 aa5.72□□□□□ -1.49
TRAPPC9-216ENST00000634178 OSBPL9Q96SU4 736 aa5.72□□□□□ -1.49
TRAPPC9-216ENST00000634178 MLXIPQ9HAP2 919 aa5.72□□□□□ -1.49
TRAPPC9-216ENST00000634178 RASSF1Q9NS23 344 aa5.72□□□□□ -1.49
TRAPPC9-216ENST00000634178 CTTNBP2NLQ9P2B4 639 aa5.72□□□□□ -1.49
TRAPPC9-216ENST00000634178 EIF2B4Q9UI10 523 aaKnown RBP5.72□□□□□ -1.49
TRAPPC9-216ENST00000634178 KCNE5Q9UJ90 142 aa5.72□□□□□ -1.49
TRAPPC9-216ENST00000634178 FBXO2Q9UK22 296 aaPredicted RBP5.72□□□□□ -1.49
TRAPPC9-216ENST00000634178 NDRG4Q9ULP0 352 aaKnown RBP5.72□□□□□ -1.49
TRAPPC9-216ENST00000634178 C19orf53Q9UNZ5 99 aaPredicted RBP5.72□□□□□ -1.49
TRAPPC9-216ENST00000634178 TNS3Q68CZ2 1445 aa5.72□□□□□ -1.49
TRAPPC9-216ENST00000634178 ARHGEF10O15013 1369 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 COL14A1Q05707 1796 aaKnown RBP5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 CASZ1Q86V15 1759 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 A0A1W2PS29 197 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 MYADML2A6NDP7 307 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 F5H697 171 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 PCDH17O14917 1159 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 TRIM24O15164 1050 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 HOXC11O43248 304 aaPredicted RBP5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 SUN1O94901 812 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 TK1P04183 234 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 PRKCBP05771 671 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 CENPBP07199 599 aaPredicted RBP5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 TNFAIP3P21580 790 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 FGFR4P22455 802 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 BDNFP23560 247 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 CD6P30203 668 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 MAN2A2P49641 1150 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 NDUFV1P49821 464 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 MTHFSP49914 203 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 PDE6CP51160 858 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 PGDP52209 483 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 FPGSQ05932 587 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 DYRK1AQ13627 763 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 CSHL1Q14406 222 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 ZIK1Q3SY52 487 aaPredicted RBP5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 ARHGAP40Q5TG30 622 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 METRNLQ641Q3 311 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 ABLIM2Q6H8Q1 611 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 TCTN3Q6NUS6 607 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 ARMC6Q6NXE6 501 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 MICALCLQ6ZW33 695 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 CIR1Q86X95 450 aaPredicted RBP5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 ESX1Q8N693 406 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 DNAJB14Q8TBM8 379 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 CPT1BQ92523 772 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 SNX19Q92543 992 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 MAELQ96JY0 434 aaKnown RBP5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 TTPALQ9BTX7 342 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 GPR87Q9BY21 358 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 KRTAP9-3Q9BYQ3 159 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 INO80BQ9C086 356 aaPredicted RBP5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 BRD8Q9H0E9 1235 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 TMX4Q9H1E5 349 aaPredicted RBP5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 JMJD4Q9H9V9 463 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 NOD2Q9HC29 1040 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 UBN1Q9NPG3 1134 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 NDUFAF4Q9P032 175 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 HSFX1Q9UBD0 423 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 FEM1BQ9UK73 627 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 USP22Q9UPT9 525 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 TECPR2O15040 1411 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 SPATA31A5Q5VU36 1347 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 SPATA31A7Q8IWB4 1347 aa5.71□□□□□ -1.5
TRAPPC9-216ENST00000634178 ADAMTS20P59510 1910 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 hCG_1984214I3L0E3 225 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 EYA2O00167 538 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 LEFTY2O00292 366 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 MBD4O95243 580 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 POLBP06746 335 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 CKMT1AP12532 417 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 CD19P15391 556 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 CNTFP26441 200 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 NPTX2P47972 431 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 GATMP50440 423 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 CDK7P50613 346 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 RABGGTBP53611 331 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 RNASE9P60153 205 aaKnown RBP5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 HSD11B2P80365 405 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 UBE3AQ05086 875 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 TUBB3Q13509 450 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 RPS6KA2Q15349 733 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 TRIM60Q495X7 471 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 HS1BP3Q53T59 392 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 RGS7BPQ6MZT1 257 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 GLB1LQ6UWU2 654 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 TMPRSS9Q7Z410 1059 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 HERC6Q8IVU3 1022 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 MAPKAPK5Q8IW41 473 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 TMEM57Q8N5G2 664 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms