RNA–Protein interactions for RNA: ENST00000628867.1

SPTAN1-215, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-215ENST00000628867 PCDHB13Q9Y5F0 798 aa8.08□□□□□ -1.12
SPTAN1-215ENST00000628867 PCDHGA1Q9Y5H4 931 aa8.08□□□□□ -1.12
SPTAN1-215ENST00000628867 HEMK1Q9Y5R4 338 aaPredicted RBP8.08□□□□□ -1.12
SPTAN1-215ENST00000628867 STYXL1Q9Y6J8 313 aa8.08□□□□□ -1.12
SPTAN1-215ENST00000628867 PLXNB3Q9ULL4 1909 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 PTPRJQ12913 1337 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 B8ZZF3 427 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 ENC1O14682 589 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 SLC26A4O43511 780 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 TLX3O43711 291 aaPredicted RBP8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 SLC28A2O43868 658 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 EIF5BO60841 1220 aaKnown RBP8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 GCNT3O95395 438 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 CYBBP04839 570 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 EPHX1P07099 455 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 TRIM21P19474 475 aaKnown RBP8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 WARSP23381 471 aaKnown RBP8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 IL12RB1P42701 662 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 GRIA4P48058 902 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 TOB1P50616 345 aaPredicted RBP8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 ZNF131P52739 623 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 BCAT1P54687 386 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 UCNP55089 124 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 KCNH2Q12809 1159 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 TRPC3Q13507 836 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 PTPRNQ16849 979 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 HS1BP3Q53T59 392 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 ARHGAP40Q5TG30 622 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 SERPINA13PQ6UXR4 307 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 HTR3DQ70Z44 454 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 DYMQ7RTS9 669 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 BRSK2Q8IWQ3 736 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 NAF1Q96HR8 494 aaKnown RBP8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 CNDP2Q96KP4 475 aaKnown RBP8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 AK8Q96MA6 479 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 TRIM9Q9C026 710 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 CIPCQ9C0C6 399 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 MKRN2Q9H000 416 aaKnown RBP8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 BTBD1Q9H0C5 482 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 PCED1AQ9H1Q7 454 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 FBXO44Q9H4M3 255 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 PCIF1Q9H4Z3 704 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 TLR8Q9NR97 1041 aaKnown RBP8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 WDR70Q9NW82 654 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 TBC1D7Q9P0N9 293 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 USP36Q9P275 1121 aaKnown RBP8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 PLA2G4CQ9UP65 541 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 NCKAP1Q9Y2A7 1128 aa8.07□□□□□ -1.12
SPTAN1-215ENST00000628867 TCHHQ07283 1943 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 DENND4CQ5VZ89 1909 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 CEP192Q8TEP8 1941 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 ZNF233A6NK53 670 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 KCNJ18B7U540 433 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 H0Y8X5 98 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 TIMM44O43615 452 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 TLR5O60602 858 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 PHACTR2O75167 634 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 WISP1O95388 367 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 DNTTP04053 509 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 CHRM1P11229 460 aaPredicted RBP8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 TNNI1P19237 187 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 GARTP22102 1010 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 ADSSP30520 456 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 DDIT3P35638 169 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 CHKAP35790 457 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 PLA2G4AP47712 749 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 ARRB1P49407 418 aaPredicted RBP8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 TUBP50607 506 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 TMPRSS3P57727 454 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 BNC1Q01954 994 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 SFSWAPQ12872 951 aaKnown RBP8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 WDR72Q3MJ13 1102 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 TMEM119Q4V9L6 283 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 HES3Q5TGS1 186 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 ARL6IP4Q66PJ3 421 aaKnown RBP8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 PRICKLE2Q7Z3G6 844 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 TADA2BQ86TJ2 420 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 SFR1Q86XK3 245 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 GATAD2AQ86YP4 633 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 GPD1LQ8N335 351 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 ZNF248Q8NDW4 579 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 SCAMP5Q8TAC9 235 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 SNIP1Q8TAD8 396 aaKnown RBP8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 RAD54LQ92698 747 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 WBP1Q96G27 269 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 ZSCAN31Q96LW9 406 aaPredicted RBP8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 KCNK16Q96T55 309 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 FAM117AQ9C073 453 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 ZNF518BQ9C0D4 1074 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 LHX5Q9H2C1 402 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 ST6GALNAC4Q9H4F1 302 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 C6orf106Q9H6K1 298 aaPredicted RBP8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 TM9SF3Q9HD45 589 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 INTS13Q9NVM9 706 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 COMMD8Q9NX08 183 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 THAP10Q9P2Z0 257 aaPredicted RBP8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 DNMT3LQ9UJW3 386 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 HCN2Q9UL51 889 aa8.06□□□□□ -1.12
SPTAN1-215ENST00000628867 ZNF510Q9Y2H8 683 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms