RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 FAM50BQ9Y247 325 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 ZNF804BA4D1E1 1349 aa3.59□□□□□ -1.83
CNOT1-223ENST00000628857 CYP2D7A0A087X1C5 515 aa3.58□□□□□ -1.84
CNOT1-223ENST00000628857 EXOC3O60645 756 aa3.58□□□□□ -1.84
CNOT1-223ENST00000628857 CBFA2T3O75081 653 aa3.58□□□□□ -1.84
CNOT1-223ENST00000628857 WDR47O94967 919 aa3.58□□□□□ -1.84
CNOT1-223ENST00000628857 PDE8BO95263 885 aa3.58□□□□□ -1.84
CNOT1-223ENST00000628857 NHLRC4P0CG21 123 aaPredicted RBP3.58□□□□□ -1.84
CNOT1-223ENST00000628857 ARP10275 920 aa3.58□□□□□ -1.84
CNOT1-223ENST00000628857 ATF7P17544 494 aaPredicted RBP3.58□□□□□ -1.84
CNOT1-223ENST00000628857 EGR1P18146 543 aa3.58□□□□□ -1.84
CNOT1-223ENST00000628857 TNFSF4P23510 183 aa3.58□□□□□ -1.84
CNOT1-223ENST00000628857 MCM5P33992 734 aa3.58□□□□□ -1.84
CNOT1-223ENST00000628857 ITGA8P53708 1063 aa3.58□□□□□ -1.84
CNOT1-223ENST00000628857 SRSF4Q08170 494 aaKnown RBP3.58□□□□□ -1.84
CNOT1-223ENST00000628857 KCNAB1Q14722 419 aa3.58□□□□□ -1.84
CNOT1-223ENST00000628857 LARS2Q15031 903 aaKnown RBP3.58□□□□□ -1.84
CNOT1-223ENST00000628857 MAPKAPK3Q16644 382 aa3.58□□□□□ -1.84
CNOT1-223ENST00000628857 FAM209BQ5JX69 171 aa3.58□□□□□ -1.84
CNOT1-223ENST00000628857 MEX3CQ5U5Q3 659 aaKnown RBP3.58□□□□□ -1.84
CNOT1-223ENST00000628857 ABLIM2Q6H8Q1 611 aa3.58□□□□□ -1.84
CNOT1-223ENST00000628857 VSTM1Q6UX27 236 aa3.58□□□□□ -1.84
CNOT1-223ENST00000628857 CLEC9AQ6UXN8 241 aa3.58□□□□□ -1.84
CNOT1-223ENST00000628857 ZNF782Q6ZMW2 699 aaPredicted RBP3.58□□□□□ -1.84
CNOT1-223ENST00000628857 FAM43BQ6ZT52 329 aaPredicted RBP3.58□□□□□ -1.84
CNOT1-223ENST00000628857 NEK8Q86SG6 692 aa3.58□□□□□ -1.84
CNOT1-223ENST00000628857 FTSJ3Q8IY81 847 aaKnown RBP3.58□□□□□ -1.84
CNOT1-223ENST00000628857 FAM9BQ8IZU0 186 aa3.58□□□□□ -1.84
CNOT1-223ENST00000628857 CCDC33Q8N5R6 958 aa3.58□□□□□ -1.84
CNOT1-223ENST00000628857 DEPTORQ8TB45 409 aa3.58□□□□□ -1.84
CNOT1-223ENST00000628857 TNIP3Q96KP6 325 aa3.58□□□□□ -1.84
CNOT1-223ENST00000628857 CCDC138Q96M89 665 aa3.58□□□□□ -1.84
CNOT1-223ENST00000628857 TMEM79Q9BSE2 394 aa3.58□□□□□ -1.84
CNOT1-223ENST00000628857 CINPQ9BW66 212 aaPredicted RBP3.58□□□□□ -1.84
CNOT1-223ENST00000628857 C1QTNF7Q9BXJ2 289 aa3.58□□□□□ -1.84
CNOT1-223ENST00000628857 RNF26Q9BY78 433 aaPredicted RBP3.58□□□□□ -1.84
CNOT1-223ENST00000628857 TMEM8AQ9HCN3 771 aa3.58□□□□□ -1.84
CNOT1-223ENST00000628857 RGL1Q9NZL6 768 aa3.58□□□□□ -1.84
CNOT1-223ENST00000628857 PHTF1Q9UMS5 762 aa3.58□□□□□ -1.84
CNOT1-223ENST00000628857 COL3A1P02461 1466 aaPredicted RBP3.58□□□□□ -1.84
CNOT1-223ENST00000628857 TMEM232C9JQI7 657 aa3.57□□□□□ -1.84
CNOT1-223ENST00000628857 PLIN1O60240 522 aa3.57□□□□□ -1.84
CNOT1-223ENST00000628857 GLP2RO95838 553 aa3.57□□□□□ -1.84
CNOT1-223ENST00000628857 CYP2A6P11509 494 aaPredicted RBP3.57□□□□□ -1.84
CNOT1-223ENST00000628857 MMP8P22894 467 aa3.57□□□□□ -1.84
CNOT1-223ENST00000628857 FPR3P25089 353 aa3.57□□□□□ -1.84
CNOT1-223ENST00000628857 EEF1GP26641 437 aaKnown RBP3.57□□□□□ -1.84
CNOT1-223ENST00000628857 MST1P26927 711 aa3.57□□□□□ -1.84
CNOT1-223ENST00000628857 TXNL4AP83876 142 aaKnown RBP3.57□□□□□ -1.84
CNOT1-223ENST00000628857 NSUN2Q08J23 767 aaKnown RBP eCLIP3.57□□□□□ -1.84
CNOT1-223ENST00000628857 AASDHQ4L235 1098 aaPredicted RBP3.57□□□□□ -1.84
CNOT1-223ENST00000628857 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.57□□□□□ -1.84
CNOT1-223ENST00000628857 KLHDC7AQ5VTJ3 777 aa3.57□□□□□ -1.84
CNOT1-223ENST00000628857 FAM90A2PQ658T7 463 aa3.57□□□□□ -1.84
CNOT1-223ENST00000628857 CRTC1Q6UUV9 634 aa3.57□□□□□ -1.84
CNOT1-223ENST00000628857 SERPINA13PQ6UXR4 307 aa3.57□□□□□ -1.84
CNOT1-223ENST00000628857 DPY19L3Q6ZPD9 716 aa3.57□□□□□ -1.84
CNOT1-223ENST00000628857 C1QL2Q7Z5L3 287 aa3.57□□□□□ -1.84
CNOT1-223ENST00000628857 LIX1LQ8IVB5 337 aa3.57□□□□□ -1.84
CNOT1-223ENST00000628857 CCDC28AQ8IWP9 274 aa3.57□□□□□ -1.84
CNOT1-223ENST00000628857 CLASRPQ8N2M8 674 aaKnown RBP3.57□□□□□ -1.84
CNOT1-223ENST00000628857 FSTL5Q8N475 847 aaPredicted RBP3.57□□□□□ -1.84
CNOT1-223ENST00000628857 FAM71DQ8N9W8 422 aa3.57□□□□□ -1.84
CNOT1-223ENST00000628857 PNLDC1Q8NA58 520 aaKnown RBP3.57□□□□□ -1.84
CNOT1-223ENST00000628857 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.57□□□□□ -1.84
CNOT1-223ENST00000628857 BCAS4Q8TDM0 211 aa3.57□□□□□ -1.84
CNOT1-223ENST00000628857 PNISRQ8TF01 805 aaKnown RBP3.57□□□□□ -1.84
CNOT1-223ENST00000628857 GJA10Q969M2 543 aa3.57□□□□□ -1.84
CNOT1-223ENST00000628857 HIC2Q96JB3 615 aa3.57□□□□□ -1.84
CNOT1-223ENST00000628857 RIPOR3Q96MK2 946 aa3.57□□□□□ -1.84
CNOT1-223ENST00000628857 MMS19Q96T76 1030 aa3.57□□□□□ -1.84
CNOT1-223ENST00000628857 MACROD1Q9BQ69 325 aa3.57□□□□□ -1.84
CNOT1-223ENST00000628857 HELLSQ9NRZ9 838 aa3.57□□□□□ -1.84
CNOT1-223ENST00000628857 ZMYND8Q9ULU4 1186 aaPredicted RBP3.57□□□□□ -1.84
CNOT1-223ENST00000628857 SETD1BQ9UPS6 1966 aaKnown RBP3.57□□□□□ -1.84
CNOT1-223ENST00000628857 MAN2B2Q9Y2E5 1009 aa3.57□□□□□ -1.84
CNOT1-223ENST00000628857 BTBD3Q9Y2F9 522 aa3.57□□□□□ -1.84
CNOT1-223ENST00000628857 WDR17Q8IZU2 1322 aa3.56□□□□□ -1.84
CNOT1-223ENST00000628857 PLA2G6O60733 806 aa3.56□□□□□ -1.84
CNOT1-223ENST00000628857 GCATO75600 419 aa3.56□□□□□ -1.84
CNOT1-223ENST00000628857 NTSR2O95665 410 aa3.56□□□□□ -1.84
CNOT1-223ENST00000628857 VIPP01282 170 aa3.56□□□□□ -1.84
CNOT1-223ENST00000628857 MATN1P21941 496 aa3.56□□□□□ -1.84
CNOT1-223ENST00000628857 KELP23276 732 aa3.56□□□□□ -1.84
CNOT1-223ENST00000628857 DUSP1P28562 367 aa3.56□□□□□ -1.84
CNOT1-223ENST00000628857 NTSR1P30989 418 aa3.56□□□□□ -1.84
CNOT1-223ENST00000628857 COPB1P53618 953 aaKnown RBP3.56□□□□□ -1.84
CNOT1-223ENST00000628857 GPC5P78333 572 aa3.56□□□□□ -1.84
CNOT1-223ENST00000628857 CCDC15Q0P6D6 951 aa3.56□□□□□ -1.84
CNOT1-223ENST00000628857 GPS1Q13098 491 aa3.56□□□□□ -1.84
CNOT1-223ENST00000628857 DAZAP2Q15038 168 aaPredicted RBP3.56□□□□□ -1.84
CNOT1-223ENST00000628857 EZH2Q15910 746 aaKnown RBP3.56□□□□□ -1.84
CNOT1-223ENST00000628857 TRIM71Q2Q1W2 868 aaKnown RBP3.56□□□□□ -1.84
CNOT1-223ENST00000628857 MORN5Q5VZ52 161 aa3.56□□□□□ -1.84
CNOT1-223ENST00000628857 RRAGBQ5VZM2 374 aa3.56□□□□□ -1.84
CNOT1-223ENST00000628857 RANBP10Q6VN20 620 aa3.56□□□□□ -1.84
CNOT1-223ENST00000628857 ZNF66Q6ZN08 573 aa3.56□□□□□ -1.84
CNOT1-223ENST00000628857 DEF8Q6ZN54 512 aa3.56□□□□□ -1.84
CNOT1-223ENST00000628857 DCDC5Q6ZRR9 648 aa3.56□□□□□ -1.84
CNOT1-223ENST00000628857 FAM186BQ8IYM0 893 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms