RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 BBS7Q8IWZ6 715 aa13.05□□□□□ -0.32
LINC00963-217ENST00000624009 ABCA7Q8IZY2 2146 aa13.05□□□□□ -0.32
LINC00963-217ENST00000624009 SIX6OS1Q8N1H7 587 aa13.05□□□□□ -0.32
LINC00963-217ENST00000624009 SUMF1Q8NBK3 374 aa13.05□□□□□ -0.32
LINC00963-217ENST00000624009 GPT2Q8TD30 523 aa13.05□□□□□ -0.32
LINC00963-217ENST00000624009 SHC3Q92529 594 aa13.05□□□□□ -0.32
LINC00963-217ENST00000624009 PNKPQ96T60 521 aa13.05□□□□□ -0.32
LINC00963-217ENST00000624009 ZSWIM1Q9BR11 485 aa13.05□□□□□ -0.32
LINC00963-217ENST00000624009 TUBGCP2Q9BSJ2 902 aa13.05□□□□□ -0.32
LINC00963-217ENST00000624009 TRIM62Q9BVG3 475 aa13.05□□□□□ -0.32
LINC00963-217ENST00000624009 IRX2Q9BZI1 471 aaPredicted RBP13.05□□□□□ -0.32
LINC00963-217ENST00000624009 NDST4Q9H3R1 872 aa13.05□□□□□ -0.32
LINC00963-217ENST00000624009 FBRSL1Q9HCM7 1045 aaKnown RBP13.05□□□□□ -0.32
LINC00963-217ENST00000624009 UBE2TQ9NPD8 197 aaPredicted RBP13.05□□□□□ -0.32
LINC00963-217ENST00000624009 ABCC13Q9NSE7 274 aa13.05□□□□□ -0.32
LINC00963-217ENST00000624009 WDR35Q9P2L0 1181 aa13.05□□□□□ -0.32
LINC00963-217ENST00000624009 DCHS1Q96JQ0 3298 aa13.04□□□□□ -0.32
LINC00963-217ENST00000624009 M0QYV0 167 aa13.04□□□□□ -0.32
LINC00963-217ENST00000624009 CACNG3O60359 315 aa13.04□□□□□ -0.32
LINC00963-217ENST00000624009 RNF40O75150 1001 aa13.04□□□□□ -0.32
LINC00963-217ENST00000624009 STC2O76061 302 aa13.04□□□□□ -0.32
LINC00963-217ENST00000624009 LATS1O95835 1130 aa13.04□□□□□ -0.32
LINC00963-217ENST00000624009 GPD2P43304 727 aa13.04□□□□□ -0.32
LINC00963-217ENST00000624009 TNFRSF4P43489 277 aa13.04□□□□□ -0.32
LINC00963-217ENST00000624009 MRPS21P82921 87 aaKnown RBP13.04□□□□□ -0.32
LINC00963-217ENST00000624009 ADIGQ0VDE8 80 aa13.04□□□□□ -0.32
LINC00963-217ENST00000624009 VWA3BQ502W6 1294 aa13.04□□□□□ -0.32
LINC00963-217ENST00000624009 MIIPQ5JXC2 388 aa13.04□□□□□ -0.32
LINC00963-217ENST00000624009 BTBD8Q5XKL5 378 aa13.04□□□□□ -0.32
LINC00963-217ENST00000624009 PMF1Q6P1K2 205 aa13.04□□□□□ -0.32
LINC00963-217ENST00000624009 ASCL5Q7RTU5 278 aa13.04□□□□□ -0.32
LINC00963-217ENST00000624009 PHTF2Q8N3S3 785 aa13.04□□□□□ -0.32
LINC00963-217ENST00000624009 TTC16Q8NEE8 873 aa13.04□□□□□ -0.32
LINC00963-217ENST00000624009 PLD4Q96BZ4 506 aa13.04□□□□□ -0.32
LINC00963-217ENST00000624009 CRACR2AQ9BSW2 395 aa13.04□□□□□ -0.32
LINC00963-217ENST00000624009 ULBP1Q9BZM6 244 aa13.04□□□□□ -0.32
LINC00963-217ENST00000624009 MARCH2Q9P0N8 246 aa13.04□□□□□ -0.32
LINC00963-217ENST00000624009 HBS1LQ9Y450 684 aaKnown RBP13.04□□□□□ -0.32
LINC00963-217ENST00000624009 DAAM1Q9Y4D1 1078 aa13.04□□□□□ -0.32
LINC00963-217ENST00000624009 R4GN57 208 aa13.04□□□□□ -0.32
LINC00963-217ENST00000624009 CACNA1EQ15878 2313 aa13.04□□□□□ -0.32
LINC00963-217ENST00000624009 NUP205Q92621 2012 aa13.03□□□□□ -0.32
LINC00963-217ENST00000624009 KCNJ18B7U540 433 aa13.03□□□□□ -0.32
LINC00963-217ENST00000624009 K7EQS6 105 aa13.03□□□□□ -0.32
LINC00963-217ENST00000624009 TULP2O00295 520 aa13.03□□□□□ -0.32
LINC00963-217ENST00000624009 KAT7O95251 611 aa13.03□□□□□ -0.32
LINC00963-217ENST00000624009 APODP05090 189 aa13.03□□□□□ -0.32
LINC00963-217ENST00000624009 SLC9A1P19634 815 aa13.03□□□□□ -0.32
LINC00963-217ENST00000624009 BRD2P25440 801 aaKnown RBP13.03□□□□□ -0.32
LINC00963-217ENST00000624009 DAOAP59103 153 aa13.03□□□□□ -0.32
LINC00963-217ENST00000624009 NNTQ13423 1086 aa13.03□□□□□ -0.32
LINC00963-217ENST00000624009 KCNJ12Q14500 433 aa13.03□□□□□ -0.32
LINC00963-217ENST00000624009 TCP11X2Q5H9J9 407 aa13.03□□□□□ -0.32
LINC00963-217ENST00000624009 CDKAL1Q5VV42 579 aa13.03□□□□□ -0.32
LINC00963-217ENST00000624009 MSANTD2Q6P1R3 559 aa13.03□□□□□ -0.32
LINC00963-217ENST00000624009 RSRC2Q7L4I2 434 aaKnown RBP13.03□□□□□ -0.32
LINC00963-217ENST00000624009 WDR5BQ86VZ2 330 aa13.03□□□□□ -0.32
LINC00963-217ENST00000624009 FAM217AQ8IXS0 508 aa13.03□□□□□ -0.32
LINC00963-217ENST00000624009 CPXM2Q8N436 756 aa13.03□□□□□ -0.32
LINC00963-217ENST00000624009 GPR161Q8N6U8 529 aaKnown RBP13.03□□□□□ -0.32
LINC00963-217ENST00000624009 UBA3Q8TBC4 463 aa13.03□□□□□ -0.32
LINC00963-217ENST00000624009 USP33Q8TEY7 942 aa13.03□□□□□ -0.32
LINC00963-217ENST00000624009 ZNF606Q8WXB4 792 aa13.03□□□□□ -0.32
LINC00963-217ENST00000624009 EZH1Q92800 747 aaPredicted RBP13.03□□□□□ -0.32
LINC00963-217ENST00000624009 SECISBP2LQ93073 1101 aaKnown RBP13.03□□□□□ -0.32
LINC00963-217ENST00000624009 XPO6Q96QU8 1125 aaKnown RBP13.03□□□□□ -0.32
LINC00963-217ENST00000624009 ANO10Q9NW15 660 aa13.03□□□□□ -0.32
LINC00963-217ENST00000624009 DEC1Q9P2X7 70 aa13.03□□□□□ -0.32
LINC00963-217ENST00000624009 EBF1Q9UH73 591 aa13.03□□□□□ -0.32
LINC00963-217ENST00000624009 STOML2Q9UJZ1 356 aa13.03□□□□□ -0.32
LINC00963-217ENST00000624009 PCDHGC3Q9UN70 934 aa13.03□□□□□ -0.32
LINC00963-217ENST00000624009 SLC8A2Q9UPR5 921 aa13.03□□□□□ -0.32
LINC00963-217ENST00000624009 STARD13Q9Y3M8 1113 aa13.03□□□□□ -0.32
LINC00963-217ENST00000624009 NFE2L3Q9Y4A8 694 aa13.03□□□□□ -0.32
LINC00963-217ENST00000624009 CKAP5Q14008 2032 aa13.02□□□□□ -0.33
LINC00963-217ENST00000624009 CHRM1P11229 460 aaPredicted RBP13.02□□□□□ -0.33
LINC00963-217ENST00000624009 KRT5P13647 590 aa13.02□□□□□ -0.33
LINC00963-217ENST00000624009 GNA15P30679 374 aa13.02□□□□□ -0.33
LINC00963-217ENST00000624009 BPIFB4P59827 614 aa13.02□□□□□ -0.33
LINC00963-217ENST00000624009 RING1Q06587 406 aa13.02□□□□□ -0.33
LINC00963-217ENST00000624009 EFEMP1Q12805 493 aa13.02□□□□□ -0.33
LINC00963-217ENST00000624009 E2F5Q15329 346 aa13.02□□□□□ -0.33
LINC00963-217ENST00000624009 TRIP4Q15650 581 aaPredicted RBP13.02□□□□□ -0.33
LINC00963-217ENST00000624009 CCDC183Q5T5S1 534 aa13.02□□□□□ -0.33
LINC00963-217ENST00000624009 BSPRYQ5W0U4 402 aa13.02□□□□□ -0.33
LINC00963-217ENST00000624009 TSSK4Q6SA08 328 aa13.02□□□□□ -0.33
LINC00963-217ENST00000624009 TMEM110Q86TL2 294 aa13.02□□□□□ -0.33
LINC00963-217ENST00000624009 TMEM25Q86YD3 366 aa13.02□□□□□ -0.33
LINC00963-217ENST00000624009 MIB1Q86YT6 1006 aa13.02□□□□□ -0.33
LINC00963-217ENST00000624009 CREBRFQ8IUR6 639 aa13.02□□□□□ -0.33
LINC00963-217ENST00000624009 RPLP0P6Q8NHW5 317 aa13.02□□□□□ -0.33
LINC00963-217ENST00000624009 RNF139Q8WU17 664 aa13.02□□□□□ -0.33
LINC00963-217ENST00000624009 RUBCNQ92622 972 aa13.02□□□□□ -0.33
LINC00963-217ENST00000624009 GOLGA1Q92805 767 aa13.02□□□□□ -0.33
LINC00963-217ENST00000624009 SLC4A5Q9BY07 1137 aa13.02□□□□□ -0.33
LINC00963-217ENST00000624009 LHX5Q9H2C1 402 aa13.02□□□□□ -0.33
LINC00963-217ENST00000624009 SIX2Q9NPC8 291 aa13.02□□□□□ -0.33
LINC00963-217ENST00000624009 ARHGEF4Q9NR80 690 aa13.02□□□□□ -0.33
LINC00963-217ENST00000624009 FBXO10Q9UK96 956 aa13.02□□□□□ -0.33
LINC00963-217ENST00000624009 LAMA1P25391 3075 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms