RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 ADAM17P78536 824 aa4.26□□□□□ -1.73
LRRC39-204ENST00000620882 TIAL1Q01085 375 aaKnown RBP eCLIP4.26□□□□□ -1.73
LRRC39-204ENST00000620882 RNASELQ05823 741 aaKnown RBP4.26□□□□□ -1.73
LRRC39-204ENST00000620882 MTAPQ13126 283 aa4.26□□□□□ -1.73
LRRC39-204ENST00000620882 CCNG2Q16589 344 aa4.26□□□□□ -1.73
LRRC39-204ENST00000620882 CTXN3Q4LDR2 81 aa4.26□□□□□ -1.73
LRRC39-204ENST00000620882 WDR45BQ5MNZ6 344 aa4.26□□□□□ -1.73
LRRC39-204ENST00000620882 SLC9A4Q6AI14 798 aa4.26□□□□□ -1.73
LRRC39-204ENST00000620882 SLC22A25Q6T423 547 aa4.26□□□□□ -1.73
LRRC39-204ENST00000620882 LRRC55Q6ZSA7 311 aa4.26□□□□□ -1.73
LRRC39-204ENST00000620882 TRABD2AQ86V40 505 aa4.26□□□□□ -1.73
LRRC39-204ENST00000620882 SLC15A3Q8IY34 581 aa4.26□□□□□ -1.73
LRRC39-204ENST00000620882 ZNF713Q8N859 430 aaPredicted RBP4.26□□□□□ -1.73
LRRC39-204ENST00000620882 FAM71DQ8N9W8 422 aa4.26□□□□□ -1.73
LRRC39-204ENST00000620882 MDGA1Q8NFP4 955 aa4.26□□□□□ -1.73
LRRC39-204ENST00000620882 ATG4AQ8WYN0 398 aa4.26□□□□□ -1.73
LRRC39-204ENST00000620882 ZNF622Q969S3 477 aaKnown RBP eCLIP4.26□□□□□ -1.73
LRRC39-204ENST00000620882 SNX21Q969T3 373 aa4.26□□□□□ -1.73
LRRC39-204ENST00000620882 PRR11Q96HE9 360 aaPredicted RBP4.26□□□□□ -1.73
LRRC39-204ENST00000620882 APOPT1Q96IL0 206 aa4.26□□□□□ -1.73
LRRC39-204ENST00000620882 LMF1Q96S06 567 aa4.26□□□□□ -1.73
LRRC39-204ENST00000620882 TTPALQ9BTX7 342 aa4.26□□□□□ -1.73
LRRC39-204ENST00000620882 PLA2G3Q9NZ20 509 aa4.26□□□□□ -1.73
LRRC39-204ENST00000620882 NDUFAF4Q9P032 175 aa4.26□□□□□ -1.73
LRRC39-204ENST00000620882 RAB21Q9UL25 225 aa4.26□□□□□ -1.73
LRRC39-204ENST00000620882 USP22Q9UPT9 525 aa4.26□□□□□ -1.73
LRRC39-204ENST00000620882 KCTD3Q9Y597 815 aa4.26□□□□□ -1.73
LRRC39-204ENST00000620882 A0A1B0GTW7 788 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 F5H0A9 414 aaPredicted RBP4.25□□□□□ -1.73
LRRC39-204ENST00000620882 CTIFO43310 598 aaKnown RBP4.25□□□□□ -1.73
LRRC39-204ENST00000620882 ACP5P13686 325 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 AKR1B1P15121 316 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 KCNA2P16389 499 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 ITGALP20701 1170 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 OAS2P29728 719 aaKnown RBP4.25□□□□□ -1.73
LRRC39-204ENST00000620882 KRT20P35900 424 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 STAT1P42224 750 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 WASHC5Q12768 1159 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 TAF11Q15544 211 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 GPR68Q15743 365 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 PRICKLE4Q2TBC4 344 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 NRN1LQ496H8 165 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 CERCAMQ5T4B2 595 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 C16orf89Q6UX73 402 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 TAX1BP1Q86VP1 789 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 ADGRG5Q8IZF4 528 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 LRRC71Q8N4P6 559 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 CLEC4CQ8WTT0 213 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 WDR60Q8WVS4 1066 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 NPIPB3Q92617 1050 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 ZDHHC12Q96GR4 267 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 PNKPQ96T60 521 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 STN1Q9H668 368 aaKnown RBP4.25□□□□□ -1.73
LRRC39-204ENST00000620882 CCDC134Q9H6E4 229 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 NOD2Q9HC29 1040 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 SH3GLB2Q9NR46 395 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 MAGED1Q9Y5V3 778 aaPredicted RBP4.25□□□□□ -1.73
LRRC39-204ENST00000620882 COL15A1P39059 1388 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 SCO2A0A1W2PP80 73 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 PPM1DO15297 605 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 URI1O94763 535 aaPredicted RBP4.25□□□□□ -1.73
LRRC39-204ENST00000620882 F9P00740 461 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 TFRCP02786 760 aaKnown RBP4.25□□□□□ -1.73
LRRC39-204ENST00000620882 LYL1P12980 280 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 GATA3P23771 443 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 MSX2P35548 267 aaPredicted RBP4.25□□□□□ -1.73
LRRC39-204ENST00000620882 PGM1P36871 562 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 RNASE9P60153 205 aaKnown RBP4.25□□□□□ -1.73
LRRC39-204ENST00000620882 CCNIQ14094 377 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 DCTN1Q14203 1278 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 CSHL1Q14406 222 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 ACOX1Q15067 660 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 ANKRD1Q15327 319 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 PDCD4Q53EL6 469 aaKnown RBP4.25□□□□□ -1.73
LRRC39-204ENST00000620882 FAM69AQ5T7M9 428 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 B3GNTL1Q67FW5 361 aaPredicted RBP4.25□□□□□ -1.73
LRRC39-204ENST00000620882 ATG14Q6ZNE5 492 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 DPY19L3Q6ZPD9 716 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 CCDC129Q6ZRS4 1044 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 ABRAQ8N0Z2 381 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 FAM109AQ8N4B1 249 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 LSM14AQ8ND56 463 aaKnown RBP4.25□□□□□ -1.73
LRRC39-204ENST00000620882 SUPT20HQ8NEM7 779 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 TMEM125Q96AQ2 219 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 NACC2Q96BF6 587 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 ELP4Q96EB1 424 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 ITPAQ9BY32 194 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 HAUS2Q9NVX0 235 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.25□□□□□ -1.73
LRRC39-204ENST00000620882 TRPC5Q9UL62 973 aaPredicted RBP4.25□□□□□ -1.73
LRRC39-204ENST00000620882 CNOT6Q9ULM6 557 aaKnown RBP4.25□□□□□ -1.73
LRRC39-204ENST00000620882 ZBTB1Q9Y2K1 713 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 PCDHA10Q9Y5I2 948 aa4.25□□□□□ -1.73
LRRC39-204ENST00000620882 PEX12O00623 359 aa4.24□□□□□ -1.73
LRRC39-204ENST00000620882 THBS4P35443 961 aa4.24□□□□□ -1.73
LRRC39-204ENST00000620882 HARS2P49590 506 aaKnown RBP4.24□□□□□ -1.73
LRRC39-204ENST00000620882 HNRNPMP52272 730 aaKnown RBP eCLIP4.24□□□□□ -1.73
LRRC39-204ENST00000620882 MESP2Q0VG99 397 aa4.24□□□□□ -1.73
LRRC39-204ENST00000620882 ARTNQ5T4W7 220 aa4.24□□□□□ -1.73
LRRC39-204ENST00000620882 FAM90A2PQ658T7 463 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms