RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 RHOBTB3O94955 611 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 PPIL6Q8IXY8 311 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 STN1Q9H668 368 aaKnown RBP5.19□□□□□ -1.58
VPS13D-214ENST00000620676 IP6K2Q9UHH9 426 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 ITSN2Q9NZM3 1697 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 TNFRSF8P28908 595 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 ELK3P41970 407 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 C15orf59Q2T9L4 293 aaPredicted RBP5.19□□□□□ -1.58
VPS13D-214ENST00000620676 FAM9CQ8IZT9 166 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 NETO2Q8NC67 525 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 RORBQ92753 470 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 ERVK-5Q9HDB9 667 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 ARHGEF3Q9NR81 526 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 FAM49BQ9NUQ9 324 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 PEX11AO75192 247 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 SOX6P35712 828 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 MAGEA8P43361 318 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 METTL21CQ5VZV1 264 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 CLNKQ7Z7G1 428 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 KCTD14Q9BQ13 255 aaPredicted RBP5.19□□□□□ -1.58
VPS13D-214ENST00000620676 TRIM8Q9BZR9 551 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 PCDH18Q9HCL0 1135 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 KLHL8Q9P2G9 620 aaPredicted RBP5.19□□□□□ -1.58
VPS13D-214ENST00000620676 PSMD12O00232 456 aaPredicted RBP5.19□□□□□ -1.58
VPS13D-214ENST00000620676 TPH1P17752 444 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 KRT28Q7Z3Y7 464 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 CORO1BQ9BR76 489 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 SLC4A5Q9BY07 1137 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 HTR3EA5X5Y0 456 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 SSNA1O43805 119 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 PRLRP16471 622 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 IMPG1Q17R60 797 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 ARHGEF16Q5VV41 709 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 DNAJC10Q8IXB1 793 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 POF1BQ8WVV4 589 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 PSPC1Q8WXF1 523 aaKnown RBP5.18□□□□□ -1.58
VPS13D-214ENST00000620676 SNX19Q92543 992 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 TOPORSQ9NS56 1045 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-214ENST00000620676 SENP1Q9P0U3 644 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 NR2E1Q9Y466 385 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 TMCC2O75069 709 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 PCNAP12004 261 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 GNA15P30679 374 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 TBC1D21Q8IYX1 336 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 ART4Q93070 314 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 MBOAT7Q96N66 472 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 CST8O60676 142 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 PRKACAP17612 351 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 CLK3P49761 638 aaKnown RBP5.18□□□□□ -1.58
VPS13D-214ENST00000620676 RUNX1T1Q06455 604 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 NFX1Q12986 1120 aaKnown RBP5.18□□□□□ -1.58
VPS13D-214ENST00000620676 ZNF268Q14587 947 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-214ENST00000620676 SPDYE7PQ495Y7 208 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 HMBOX1Q6NT76 420 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 FRA10AC1Q70Z53 315 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 OR6P1Q8NGX9 317 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 RMDN1Q96DB5 314 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 RUSC1Q9BVN2 902 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 SEPT9Q9UHD8 586 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-214ENST00000620676 CROTQ9UKG9 612 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 CNTNAP2Q9UHC6 1331 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 ZNF263O14978 683 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 TMEM253P0C7T8 217 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 PGBD2Q6P3X8 592 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 NT5DC3Q86UY8 548 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 PEX5LQ8IYB4 626 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 HES6Q96HZ4 224 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 QKIQ96PU8 341 aaKnown RBP eCLIP5.18□□□□□ -1.582e-6■■■■■ 33.9
VPS13D-214ENST00000620676 MSTO1Q9BUK6 570 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 HMG20AQ9NP66 347 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 SAR1AQ9NR31 198 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 NPATQ14207 1427 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 INO80B-WBP1J3KQ70 363 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 KCNH1O95259 989 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 ERVK-10P10266 1014 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 GAP43P17677 238 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 BCAP31P51572 246 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 SFT2D3Q587I9 215 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 ILKAPQ9H0C8 392 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-214ENST00000620676 PNMA8CA0A1B0GUJ8 204 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 EIF2B5Q13144 721 aaKnown RBP5.18□□□□□ -1.58
VPS13D-214ENST00000620676 PCSK7Q16549 785 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 SPANXN2Q5MJ10 180 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 B3GALT6Q96L58 329 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 SP140LQ9H930 580 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 MAD2L2Q9UI95 211 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 ASXL2Q76L83 1435 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 PRR23AA6NEV1 266 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 SLC37A4O43826 429 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 PSIP1O75475 530 aaKnown RBP5.18□□□□□ -1.58
VPS13D-214ENST00000620676 RRM1P23921 792 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 AZGP1P25311 298 aaKnown RBP5.18□□□□□ -1.58
VPS13D-214ENST00000620676 HK2P52789 917 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 SLC18A2Q05940 514 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 PDZK1Q5T2W1 519 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 PFASO15067 1338 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 ARPC4-TTLL3A0A0A6YYG9 625 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 SUPT3HB4E1H0 165 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 C2CD2LO14523 706 aa5.18□□□□□ -1.58
VPS13D-214ENST00000620676 SIN3BO75182 1162 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms