RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 TPSD1Q9BZJ3 242 aa18.03■□□□□ 0.48
HMGN3-203ENST00000620514 ULBP1Q9BZM6 244 aa18.03■□□□□ 0.48
HMGN3-203ENST00000620514 DEC1Q9P2X7 70 aa18.03■□□□□ 0.48
HMGN3-203ENST00000620514 EBF1Q9UH73 591 aa18.03■□□□□ 0.48
HMGN3-203ENST00000620514 INVSQ9Y283 1065 aa18.03■□□□□ 0.48
HMGN3-203ENST00000620514 TBC1D3BA6NDS4 549 aa18.02■□□□□ 0.48
HMGN3-203ENST00000620514 NEDD8-MDP1E9PL57 170 aa18.02■□□□□ 0.48
HMGN3-203ENST00000620514 RNF225M0QZC1 329 aaPredicted RBP18.02■□□□□ 0.48
HMGN3-203ENST00000620514 O00370 1275 aa18.02■□□□□ 0.48
HMGN3-203ENST00000620514 XPO1O14980 1071 aaKnown RBP18.02■□□□□ 0.48
HMGN3-203ENST00000620514 LRP3O75074 770 aa18.02■□□□□ 0.48
HMGN3-203ENST00000620514 KLKB1P03952 638 aa18.02■□□□□ 0.48
HMGN3-203ENST00000620514 TNFRSF4P43489 277 aa18.02■□□□□ 0.48
HMGN3-203ENST00000620514 BCAT1P54687 386 aa18.02■□□□□ 0.48
HMGN3-203ENST00000620514 SLC8A3P57103 927 aa18.02■□□□□ 0.48
HMGN3-203ENST00000620514 YWHAGP61981 247 aaKnown RBP eCLIP18.02■□□□□ 0.48
HMGN3-203ENST00000620514 UBE2HP62256 183 aa18.02■□□□□ 0.48
HMGN3-203ENST00000620514 BST2Q10589 180 aaKnown RBP18.02■□□□□ 0.48
HMGN3-203ENST00000620514 CCDC6Q16204 474 aa18.02■□□□□ 0.48
HMGN3-203ENST00000620514 CRY1Q16526 586 aa18.02■□□□□ 0.48
HMGN3-203ENST00000620514 PLK5Q496M5 336 aa18.02■□□□□ 0.48
HMGN3-203ENST00000620514 ANO7Q6IWH7 933 aa18.02■□□□□ 0.48
HMGN3-203ENST00000620514 TADA2BQ86TJ2 420 aa18.02■□□□□ 0.48
HMGN3-203ENST00000620514 ARHGEF19Q8IW93 802 aa18.02■□□□□ 0.48
HMGN3-203ENST00000620514 TRIM59Q8IWR1 403 aa18.02■□□□□ 0.48
HMGN3-203ENST00000620514 PPM1KQ8N3J5 372 aa18.02■□□□□ 0.48
HMGN3-203ENST00000620514 P2RY11Q96G91 374 aa18.02■□□□□ 0.48
HMGN3-203ENST00000620514 ZSWIM1Q9BR11 485 aa18.02■□□□□ 0.48
HMGN3-203ENST00000620514 BBS2Q9BXC9 721 aa18.02■□□□□ 0.48
HMGN3-203ENST00000620514 ARRDC1-AS1Q9H2J1 176 aa18.02■□□□□ 0.48
HMGN3-203ENST00000620514 DNAJC17Q9NVM6 304 aaKnown RBP18.02■□□□□ 0.48
HMGN3-203ENST00000620514 HESX1Q9UBX0 185 aa18.02■□□□□ 0.48
HMGN3-203ENST00000620514 HCN2Q9UL51 889 aa18.02■□□□□ 0.48
HMGN3-203ENST00000620514 PCDHB4Q9Y5E5 795 aa18.02■□□□□ 0.48
HMGN3-203ENST00000620514 P4HA2O15460 535 aa18.01■□□□□ 0.47
HMGN3-203ENST00000620514 ADAM23O75077 832 aa18.01■□□□□ 0.47
HMGN3-203ENST00000620514 ZBED1O96006 694 aa18.01■□□□□ 0.47
HMGN3-203ENST00000620514 TYRP14679 529 aa18.01■□□□□ 0.47
HMGN3-203ENST00000620514 KCNH2Q12809 1159 aa18.01■□□□□ 0.47
HMGN3-203ENST00000620514 CSRP2Q16527 193 aa18.01■□□□□ 0.47
HMGN3-203ENST00000620514 C10orf76Q5T2E6 689 aa18.01■□□□□ 0.47
HMGN3-203ENST00000620514 PM20D1Q6GTS8 502 aa18.01■□□□□ 0.47
HMGN3-203ENST00000620514 PRR23CQ6ZRP0 262 aa18.01■□□□□ 0.47
HMGN3-203ENST00000620514 RRAGAQ7L523 313 aa18.01■□□□□ 0.47
HMGN3-203ENST00000620514 ERMP1Q7Z2K6 904 aa18.01■□□□□ 0.47
HMGN3-203ENST00000620514 DGLUCYQ7Z3D6 616 aa18.01■□□□□ 0.47
HMGN3-203ENST00000620514 RASSF3Q86WH2 238 aa18.01■□□□□ 0.47
HMGN3-203ENST00000620514 ARHGAP18Q8N392 663 aa18.01■□□□□ 0.47
HMGN3-203ENST00000620514 TERB1Q8NA31 727 aa18.01■□□□□ 0.47
HMGN3-203ENST00000620514 MDGA1Q8NFP4 955 aa18.01■□□□□ 0.47
HMGN3-203ENST00000620514 BHMTQ93088 406 aa18.01■□□□□ 0.47
HMGN3-203ENST00000620514 DUSP15Q9H1R2 295 aaPredicted RBP18.01■□□□□ 0.47
HMGN3-203ENST00000620514 LRRC4Q9HBW1 653 aa18.01■□□□□ 0.47
HMGN3-203ENST00000620514 CHMP5Q9NZZ3 219 aa18.01■□□□□ 0.47
HMGN3-203ENST00000620514 MARK1Q9P0L2 795 aa18.01■□□□□ 0.47
HMGN3-203ENST00000620514 KIAA1468Q9P260 1216 aa18.01■□□□□ 0.47
HMGN3-203ENST00000620514 SPAG17Q6Q759 2223 aa18■□□□□ 0.47
HMGN3-203ENST00000620514 PRR5-ARHGAP8B1AHC4 643 aa18■□□□□ 0.47
HMGN3-203ENST00000620514 CACNG3O60359 315 aa18■□□□□ 0.47
HMGN3-203ENST00000620514 EPN2O95208 641 aa18■□□□□ 0.47
HMGN3-203ENST00000620514 PAEPP09466 180 aa18■□□□□ 0.47
HMGN3-203ENST00000620514 CORO1AP31146 461 aaKnown RBP18■□□□□ 0.47
HMGN3-203ENST00000620514 MARSP56192 900 aaKnown RBP18■□□□□ 0.47
HMGN3-203ENST00000620514 ARHGAP8P85298 464 aa18■□□□□ 0.47
HMGN3-203ENST00000620514 ADIGQ0VDE8 80 aa18■□□□□ 0.47
HMGN3-203ENST00000620514 CETN1Q12798 172 aa18■□□□□ 0.47
HMGN3-203ENST00000620514 PKDCCQ504Y2 493 aa18■□□□□ 0.47
HMGN3-203ENST00000620514 GRAMD4Q6IC98 578 aa18■□□□□ 0.47
HMGN3-203ENST00000620514 LCLAT1Q6UWP7 414 aa18■□□□□ 0.47
HMGN3-203ENST00000620514 TOGARAM2Q6ZUX3 1019 aa18■□□□□ 0.47
HMGN3-203ENST00000620514 RSRC2Q7L4I2 434 aaKnown RBP18■□□□□ 0.47
HMGN3-203ENST00000620514 EHBP1Q8NDI1 1231 aa18■□□□□ 0.47
HMGN3-203ENST00000620514 LOXL4Q96JB6 756 aa18■□□□□ 0.47
HMGN3-203ENST00000620514 ZC3H10Q96K80 434 aaKnown RBP18■□□□□ 0.47
HMGN3-203ENST00000620514 CNOT6LQ96LI5 555 aaKnown RBP18■□□□□ 0.47
HMGN3-203ENST00000620514 CDK5RAP1Q96SZ6 601 aaKnown RBP18■□□□□ 0.47
HMGN3-203ENST00000620514 PLK2Q9NYY3 685 aa18■□□□□ 0.47
HMGN3-203ENST00000620514 MARCH2Q9P0N8 246 aa18■□□□□ 0.47
HMGN3-203ENST00000620514 WDR35Q9P2L0 1181 aa18■□□□□ 0.47
HMGN3-203ENST00000620514 KIAA1257Q9ULG3 409 aa18■□□□□ 0.47
HMGN3-203ENST00000620514 RALGAPA1Q6GYQ0 2036 aa17.99■□□□□ 0.47
HMGN3-203ENST00000620514 SLC12A8A0AV02 714 aa17.99■□□□□ 0.47
HMGN3-203ENST00000620514 GDF9O60383 454 aa17.99■□□□□ 0.47
HMGN3-203ENST00000620514 GABBR2O75899 941 aa17.99■□□□□ 0.47
HMGN3-203ENST00000620514 GNA14O95837 355 aa17.99■□□□□ 0.47
HMGN3-203ENST00000620514 AFPP02771 609 aaKnown RBP17.99■□□□□ 0.47
HMGN3-203ENST00000620514 BRD2P25440 801 aaKnown RBP17.99■□□□□ 0.47
HMGN3-203ENST00000620514 WASP42768 502 aa17.99■□□□□ 0.47
HMGN3-203ENST00000620514 RGS7P49802 495 aa17.99■□□□□ 0.47
HMGN3-203ENST00000620514 ATXN1P54253 815 aaKnown RBP17.99■□□□□ 0.47
HMGN3-203ENST00000620514 COG7P83436 770 aa17.99■□□□□ 0.47
HMGN3-203ENST00000620514 SF3A2Q15428 464 aaKnown RBP17.99■□□□□ 0.47
HMGN3-203ENST00000620514 HSF5Q4G112 596 aaPredicted RBP17.99■□□□□ 0.47
HMGN3-203ENST00000620514 EOGTQ5NDL2 527 aa17.99■□□□□ 0.47
HMGN3-203ENST00000620514 ZNF513Q8N8E2 541 aaPredicted RBP17.99■□□□□ 0.47
HMGN3-203ENST00000620514 TRIML1Q8N9V2 468 aa17.99■□□□□ 0.47
HMGN3-203ENST00000620514 RBBP8NLQ8NC74 664 aaPredicted RBP17.99■□□□□ 0.47
HMGN3-203ENST00000620514 KREMEN1Q96MU8 473 aa17.99■□□□□ 0.47
HMGN3-203ENST00000620514 XPO6Q96QU8 1125 aaKnown RBP17.99■□□□□ 0.47
HMGN3-203ENST00000620514 MED15Q96RN5 788 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms