RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 XRCC4Q13426 336 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 UBAP2Q5T6F2 1119 aaKnown RBP9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 RNF43Q68DV7 783 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 PMF1Q6P1K2 205 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 DEFB106AQ8N104 65 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 FAXDC2Q96IV6 333 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 SRPK1Q96SB4 655 aaKnown RBP9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 MYLK2Q9H1R3 596 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 CCDC134Q9H6E4 229 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 NRDE2Q9H7Z3 1164 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 STOML1Q9UBI4 398 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 CPA4Q9UI42 421 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 RPS6KL1Q9Y6S9 549 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 NRCAMQ92823 1304 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 C17orf102A2RUQ5 167 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 AP1G2O75843 785 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 ENO1P06733 434 aaKnown RBP9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 ZBTB48P10074 688 aaPredicted RBP9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 SERPINB4P48594 390 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 COG7P83436 770 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 ASPHQ12797 758 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 THOC5Q13769 683 aaKnown RBP9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 OASLQ15646 514 aaKnown RBP9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 GNASQ5JWF2 1037 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 SH3PXD2AQ5TCZ1 1133 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 SCN4BQ8IWT1 228 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 THEM5Q8N1Q8 247 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 COLGALT1Q8NBJ5 622 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 ZC3H15Q8WU90 426 aaKnown RBP9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 HTR3CQ8WXA8 447 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 FAM161BQ96MY7 647 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 TMEM237Q96Q45 408 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 CEP41Q9BYV8 373 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 NACA2Q9H009 215 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 PCDH18Q9HCL0 1135 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 SIX4Q9UIU6 781 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 MID2Q9UJV3 735 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 APOEP02649 317 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 MYL2P10916 166 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 ALDH18A1P54886 795 aaKnown RBP9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 MAP3K7CLP57077 242 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 TSPY1Q01534 308 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 POU5F1BQ06416 359 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 SEPT6Q14141 434 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 SLC45A4Q5BKX6 768 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 MDH1BQ5I0G3 518 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 TDRPQ86YL5 185 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 AFAP1L2Q8N4X5 818 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 WDTC1Q8N5D0 677 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 LRRC52Q8N7C0 313 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 PLD5Q8N7P1 536 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 ANKRD52Q8NB46 1076 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 CMASQ8NFW8 434 aaPredicted RBP9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 SPOCK2Q92563 424 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 C18orf25Q96B23 403 aaPredicted RBP9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 LRRC39Q96DD0 335 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 MCRS1Q96EZ8 462 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 NSL1Q96IY1 281 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 ZNF670Q9BS34 389 aa9.53□□□□□ -0.88
RBFOX1-223ENST00000620507 C2CD4BA6NLJ0 364 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 PRPF4O43172 522 aaKnown RBP eCLIP9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 CELF2O95319 508 aaKnown RBP9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 EDN1P05305 212 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 TSHRP16473 764 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 PCSK1P29120 753 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 EPHB2P29323 1055 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 PGM1P36871 562 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 ARL1P40616 181 aaPredicted RBP9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 TKTL1P51854 596 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 SLC1A5Q15758 541 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 DUSP28Q4G0W2 176 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 TLK2Q86UE8 772 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 NAT9Q9BTE0 207 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 BCO2Q9BYV7 579 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 VCXQ9H320 206 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 NXF3Q9H4D5 531 aaKnown RBP9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 GBA2Q9HCG7 927 aaPredicted RBP9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 PIH1D1Q9NWS0 290 aaKnown RBP9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 TUBGCP4Q9UGJ1 667 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 MYH9P35579 1960 aaKnown RBP9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 ARFGEF1Q9Y6D6 1849 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 COL1A2P08123 1366 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 TRDMT1O14717 391 aaKnown RBP9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 EDF1O60869 148 aaKnown RBP9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 UNC5CO95185 931 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 CBX6O95503 412 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 AXLP30530 894 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 CDH5P33151 784 aaPredicted RBP9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 ARHGAP1Q07960 439 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 MFSD10Q14728 455 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 TAF12Q16514 161 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 PRAMEF19Q5SWL8 479 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 GPR142Q7Z601 462 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 CCNJLQ8IV13 435 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 FITM2Q8N6M3 262 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 ZNF669Q96BR6 464 aaPredicted RBP9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 LBHD1Q9BQE6 289 aaPredicted RBP9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 FAM96AQ9H5X1 160 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 YY1AP1Q9H869 796 aa9.52□□□□□ -0.89
RBFOX1-223ENST00000620507 G3BP2Q9UN86 482 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms