RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 C2CD4BA6NLJ0 364 aa21.4■■□□□ 1.02
SDHA-220ENST00000617470 SPATA31D3P0C874 917 aa21.4■■□□□ 1.02
SDHA-220ENST00000617470 KRT10P13645 584 aa21.4■■□□□ 1.02
SDHA-220ENST00000617470 COL4A4P53420 1690 aaPredicted RBP21.4■■□□□ 1.02
SDHA-220ENST00000617470 DRG2P55039 364 aaKnown RBP21.4■■□□□ 1.02
SDHA-220ENST00000617470 SNX1Q13596 522 aa21.4■■□□□ 1.02
SDHA-220ENST00000617470 TAF5Q15542 800 aa21.4■■□□□ 1.02
SDHA-220ENST00000617470 SPATA31D4Q6ZUB0 917 aa21.4■■□□□ 1.02
SDHA-220ENST00000617470 POLNQ7Z5Q5 900 aa21.4■■□□□ 1.02
SDHA-220ENST00000617470 FAM35AQ86V20 835 aa21.4■■□□□ 1.02
SDHA-220ENST00000617470 CCDC105Q8IYK2 499 aa21.4■■□□□ 1.02
SDHA-220ENST00000617470 ANKRD52Q8NB46 1076 aa21.4■■□□□ 1.02
SDHA-220ENST00000617470 ZNF461Q8TAF7 563 aa21.4■■□□□ 1.02
SDHA-220ENST00000617470 MAIP1Q8WWC4 291 aa21.4■■□□□ 1.02
SDHA-220ENST00000617470 HNRNPABQ99729 332 aaKnown RBP21.4■■□□□ 1.02
SDHA-220ENST00000617470 KRT82Q9NSB4 513 aa21.4■■□□□ 1.02
SDHA-220ENST00000617470 GRHL1Q9NZI5 618 aa21.4■■□□□ 1.02
SDHA-220ENST00000617470 PAPSS1O43252 624 aaPredicted RBP21.39■■□□□ 1.02
SDHA-220ENST00000617470 CYP2F1P24903 491 aa21.39■■□□□ 1.02
SDHA-220ENST00000617470 RAB6CQ53S08 254 aa21.39■■□□□ 1.02
SDHA-220ENST00000617470 SH3PXD2AQ5TCZ1 1133 aa21.39■■□□□ 1.02
SDHA-220ENST00000617470 ZDHHC24Q6UX98 284 aa21.39■■□□□ 1.02
SDHA-220ENST00000617470 SPOCD1Q6ZMY3 1216 aa21.39■■□□□ 1.02
SDHA-220ENST00000617470 RBM41Q96IZ5 413 aaKnown RBP21.39■■□□□ 1.02
SDHA-220ENST00000617470 RAB6CQ9H0N0 254 aa21.39■■□□□ 1.02
SDHA-220ENST00000617470 SLC27A5Q9Y2P5 690 aa21.39■■□□□ 1.02
SDHA-220ENST00000617470 SNX24Q9Y343 169 aa21.39■■□□□ 1.02
SDHA-220ENST00000617470 MYO7AQ13402 2215 aa21.39■■□□□ 1.02
SDHA-220ENST00000617470 AP1G2O75843 785 aa21.39■■□□□ 1.01
SDHA-220ENST00000617470 GGCXP38435 758 aa21.39■■□□□ 1.01
SDHA-220ENST00000617470 HSPA9P38646 679 aaKnown RBP21.39■■□□□ 1.01
SDHA-220ENST00000617470 RPL21P46778 160 aaKnown RBP21.39■■□□□ 1.01
SDHA-220ENST00000617470 RPL34P49207 117 aaKnown RBP21.39■■□□□ 1.01
SDHA-220ENST00000617470 ZNF143P52747 638 aaPredicted RBP21.39■■□□□ 1.01
SDHA-220ENST00000617470 SMARCB1Q12824 385 aa21.39■■□□□ 1.01
SDHA-220ENST00000617470 DUSP4Q13115 394 aa21.39■■□□□ 1.01
SDHA-220ENST00000617470 PAQR9Q6ZVX9 377 aa21.39■■□□□ 1.01
SDHA-220ENST00000617470 ADGRD2Q7Z7M1 963 aa21.39■■□□□ 1.01
SDHA-220ENST00000617470 SCUBE3Q8IX30 993 aa21.39■■□□□ 1.01
SDHA-220ENST00000617470 RUNDC3BQ96NL0 473 aa21.39■■□□□ 1.01
SDHA-220ENST00000617470 SEPT5Q99719 369 aaPredicted RBP21.39■■□□□ 1.01
SDHA-220ENST00000617470 TLE6Q9H808 572 aa21.39■■□□□ 1.01
SDHA-220ENST00000617470 AFF4Q9UHB7 1163 aaKnown RBP21.39■■□□□ 1.01
SDHA-220ENST00000617470 TGM5O43548 720 aa21.38■■□□□ 1.01
SDHA-220ENST00000617470 GRAP2O75791 330 aa21.38■■□□□ 1.01
SDHA-220ENST00000617470 FAM200BP0CF97 657 aa21.38■■□□□ 1.01
SDHA-220ENST00000617470 ELF1P32519 619 aa21.38■■□□□ 1.01
SDHA-220ENST00000617470 PTPN7P35236 360 aa21.38■■□□□ 1.01
SDHA-220ENST00000617470 CDKN2BP42772 138 aa21.38■■□□□ 1.01
SDHA-220ENST00000617470 BST2Q10589 180 aaKnown RBP21.38■■□□□ 1.01
SDHA-220ENST00000617470 TPGS2Q68CL5 300 aa21.38■■□□□ 1.01
SDHA-220ENST00000617470 SCN4BQ8IWT1 228 aa21.38■■□□□ 1.01
SDHA-220ENST00000617470 IQCKQ8N0W5 287 aa21.38■■□□□ 1.01
SDHA-220ENST00000617470 TTC9BQ8N6N2 239 aa21.38■■□□□ 1.01
SDHA-220ENST00000617470 SPPL2BQ8TCT7 592 aa21.38■■□□□ 1.01
SDHA-220ENST00000617470 RXFP2Q8WXD0 754 aa21.38■■□□□ 1.01
SDHA-220ENST00000617470 SMARCD1Q96GM5 515 aa21.38■■□□□ 1.01
SDHA-220ENST00000617470 FAM118BQ9BPY3 351 aa21.38■■□□□ 1.01
SDHA-220ENST00000617470 MIS12Q9H081 205 aa21.38■■□□□ 1.01
SDHA-220ENST00000617470 ACBD3Q9H3P7 528 aa21.38■■□□□ 1.01
SDHA-220ENST00000617470 ZWILCHQ9H900 591 aa21.38■■□□□ 1.01
SDHA-220ENST00000617470 CYP4F11Q9HBI6 524 aa21.38■■□□□ 1.01
SDHA-220ENST00000617470 DDX56Q9NY93 547 aaKnown RBP21.38■■□□□ 1.01
SDHA-220ENST00000617470 RASAL2Q9UJF2 1139 aa21.38■■□□□ 1.01
SDHA-220ENST00000617470 ABLIM3O94929 683 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 GLUD1P00367 558 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 GPD1P21695 349 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 MIPP30301 263 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 NRIP1P48552 1158 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 BCAT1P54687 386 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 COPS2P61201 443 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 SLC6A3Q01959 620 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 ACAP1Q15027 740 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 CCNG2Q16589 344 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 SMTNL2Q2TAL5 461 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 MGAT5BQ3V5L5 792 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 KCNT1Q5JUK3 1230 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 CYP4V2Q6ZWL3 525 aaPredicted RBP21.37■■□□□ 1.01
SDHA-220ENST00000617470 C2orf15Q8WU43 125 aaKnown RBP21.37■■□□□ 1.01
SDHA-220ENST00000617470 CNPY3Q9BT09 278 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 TRANK1O15050 2925 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 hCG_1818297A0A087WSY0 165 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 GOLGA6BA6NDN3 693 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 PRRG1O14668 218 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 SOAT2O75908 522 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 VNN2O95498 520 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 ATF2P15336 505 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 IGFBP4P22692 258 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 GRIK1P39086 918 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 MAP3K7CLP57077 242 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 SLC8A3P57103 927 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 HABP4Q5JVS0 413 aaKnown RBP21.37■■□□□ 1.01
SDHA-220ENST00000617470 FUBP3Q96I24 572 aaKnown RBP eCLIP21.37■■□□□ 1.01
SDHA-220ENST00000617470 PEBP4Q96S96 227 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 CRISPLD1Q9H336 500 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 NEU2Q9Y3R4 380 aa21.37■■□□□ 1.01
SDHA-220ENST00000617470 LRRD1A4D1F6 860 aa21.36■■□□□ 1.01
SDHA-220ENST00000617470 POLR3GO15318 223 aaPredicted RBP21.36■■□□□ 1.01
SDHA-220ENST00000617470 CLASP2O75122 1294 aaKnown RBP21.36■■□□□ 1.01
SDHA-220ENST00000617470 ECEL1O95672 775 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms