RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 ZNF358Q9NW07 568 aa13.64□□□□□ -0.23
MSH6-214ENST00000616033 HBS1LQ9Y450 684 aaKnown RBP13.64□□□□□ -0.23
MSH6-214ENST00000616033 ZNF541Q9H0D2 1346 aa13.63□□□□□ -0.23
MSH6-214ENST00000616033 CCDC78A2IDD5 438 aa13.63□□□□□ -0.23
MSH6-214ENST00000616033 BUD23O43709 281 aaKnown RBP13.63□□□□□ -0.23
MSH6-214ENST00000616033 VNN1O95497 513 aa13.63□□□□□ -0.23
MSH6-214ENST00000616033 ITGAVP06756 1048 aa13.63□□□□□ -0.23
MSH6-214ENST00000616033 GJA8P48165 433 aa13.63□□□□□ -0.23
MSH6-214ENST00000616033 PSMD7P51665 324 aa13.63□□□□□ -0.23
MSH6-214ENST00000616033 MRPS5P82675 430 aaKnown RBP13.63□□□□□ -0.23
MSH6-214ENST00000616033 PRKG1Q13976 671 aa13.63□□□□□ -0.23
MSH6-214ENST00000616033 CCNIQ14094 377 aa13.63□□□□□ -0.23
MSH6-214ENST00000616033 TLR1Q15399 786 aa13.63□□□□□ -0.23
MSH6-214ENST00000616033 NXNQ6DKJ4 435 aa13.63□□□□□ -0.23
MSH6-214ENST00000616033 KLHDC10Q6PID8 442 aa13.63□□□□□ -0.23
MSH6-214ENST00000616033 DEFB132Q7Z7B7 95 aa13.63□□□□□ -0.23
MSH6-214ENST00000616033 AMIGO2Q86SJ2 522 aa13.63□□□□□ -0.23
MSH6-214ENST00000616033 FAF1Q9UNN5 650 aaPredicted RBP13.63□□□□□ -0.23
MSH6-214ENST00000616033 FZD1Q9UP38 647 aa13.63□□□□□ -0.23
MSH6-214ENST00000616033 PLLPQ9Y342 182 aa13.63□□□□□ -0.23
MSH6-214ENST00000616033 FIS1Q9Y3D6 152 aa13.63□□□□□ -0.23
MSH6-214ENST00000616033 FARP1Q9Y4F1 1045 aaPredicted RBP13.63□□□□□ -0.23
MSH6-214ENST00000616033 PCSK6P29122 969 aa13.63□□□□□ -0.23
MSH6-214ENST00000616033 ADARP55265 1226 aaKnown RBP13.63□□□□□ -0.23
MSH6-214ENST00000616033 CDH8P55286 799 aa13.63□□□□□ -0.23
MSH6-214ENST00000616033 ROR1Q01973 937 aa13.63□□□□□ -0.23
MSH6-214ENST00000616033 MYBPC2Q14324 1141 aa13.63□□□□□ -0.23
MSH6-214ENST00000616033 MPP5Q8N3R9 675 aa13.63□□□□□ -0.23
MSH6-214ENST00000616033 LRGUKQ96M69 825 aa13.63□□□□□ -0.23
MSH6-214ENST00000616033 POLR3FQ9H1D9 316 aaPredicted RBP13.63□□□□□ -0.23
MSH6-214ENST00000616033 SMYD2Q9NRG4 433 aa13.63□□□□□ -0.23
MSH6-214ENST00000616033 PHF24Q9UPV7 400 aa13.63□□□□□ -0.23
MSH6-214ENST00000616033 COQ4Q9Y3A0 265 aa13.63□□□□□ -0.23
MSH6-214ENST00000616033 TTLL13PA6NNM8 815 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 CAPN14A8MX76 684 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 F8W8V4 182 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 H3BSA7 217 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 CCNE2O96020 404 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 ENO3P13929 434 aaPredicted RBP13.62□□□□□ -0.23
MSH6-214ENST00000616033 SLC18A1P54219 525 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 PPM1JQ5JR12 505 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 MAP4K3Q8IVH8 894 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 KIAA0319LQ8IZA0 1049 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 TNS4Q8IZW8 715 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 GMCL1Q96IK5 515 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 PRMT6Q96LA8 375 aaPredicted RBP13.62□□□□□ -0.23
MSH6-214ENST00000616033 MTMR12Q9C0I1 747 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 TUT1Q9H6E5 874 aaKnown RBP13.62□□□□□ -0.23
MSH6-214ENST00000616033 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.62□□□□□ -0.23
MSH6-214ENST00000616033 POMPQ9Y244 141 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 SRGAP2CP0DJJ0 459 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 SRGAP2BP0DMP2 458 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 NFKBIAP25963 317 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 RXRBP28702 533 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 STIP1P31948 543 aaKnown RBP13.62□□□□□ -0.23
MSH6-214ENST00000616033 ALDH1A3P47895 512 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 NUDT2P50583 147 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 GTF2A2P52657 109 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 PGGT1BP53609 377 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 MYL6P60660 151 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 MRPS9P82933 396 aaKnown RBP13.62□□□□□ -0.23
MSH6-214ENST00000616033 HADHQ16836 314 aaKnown RBP13.62□□□□□ -0.23
MSH6-214ENST00000616033 FRMD7Q6ZUT3 714 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 TMCO5AQ8N6Q1 288 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 TMEM35BQ8NCS4 154 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 DCUN1D5Q9BTE7 237 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 UNKQ9C0B0 810 aaKnown RBP13.62□□□□□ -0.23
MSH6-214ENST00000616033 MIS12Q9H081 205 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 FBXO40Q9UH90 709 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 CDH22Q9UJ99 828 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 ZNFX1Q9P2E3 1918 aaKnown RBP13.62□□□□□ -0.23
MSH6-214ENST00000616033 FKBP6O75344 327 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 TMCC1O94876 653 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 TNFSF9P41273 254 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 SESN2P58004 480 aaPredicted RBP13.62□□□□□ -0.23
MSH6-214ENST00000616033 N4BP2L1Q5TBK1 243 aaPredicted RBP13.62□□□□□ -0.23
MSH6-214ENST00000616033 LGSNQ5TDP6 509 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 STKLD1Q8NE28 680 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 SLC35B2Q8TB61 432 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 CHURC1Q8WUH1 139 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 TFAP2BQ92481 460 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 CCDC106Q9BWC9 280 aa13.62□□□□□ -0.23
MSH6-214ENST00000616033 OXCT2Q9BYC2 517 aaPredicted RBP13.62□□□□□ -0.23
MSH6-214ENST00000616033 NGRNQ9NPE2 291 aaKnown RBP13.62□□□□□ -0.23
MSH6-214ENST00000616033 DRG1Q9Y295 367 aaKnown RBP13.62□□□□□ -0.23
MSH6-214ENST00000616033 LRCH4O75427 683 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 CSPG5O95196 566 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 ZNF24P17028 368 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 MMP8P22894 467 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 KDELR1P24390 212 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 TRPC3Q13507 836 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 C15orf59Q2T9L4 293 aaPredicted RBP13.61□□□□□ -0.23
MSH6-214ENST00000616033 SPDYAQ5MJ70 313 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 PDPK2PQ6A1A2 396 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 GRAMD4Q6IC98 578 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 LRRC8BQ6P9F7 803 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 TRIML2Q8N7C3 387 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 AZIN2Q96A70 460 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 MFSD14AQ96MC6 490 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 RIT2Q99578 217 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms