RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 STRNO43815 780 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 KATNA1O75449 491 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 CD48P09326 243 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 YBX3P16989 372 aaKnown RBP eCLIP3.92□□□□□ -1.786e-7■■■□□ 17
LTN1-207ENST00000614971 GOT1P17174 413 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 BGNP21810 368 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 KLRC2P26717 231 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 GRK4P32298 578 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 NDUFV1P49821 464 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 PDK1Q15118 436 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 DNAJC14Q6Y2X3 702 aaPredicted RBP3.92□□□□□ -1.78
LTN1-207ENST00000614971 PRR23CQ6ZRP0 262 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 USP50Q70EL3 339 aaPredicted RBP3.92□□□□□ -1.78
LTN1-207ENST00000614971 POLNQ7Z5Q5 900 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 PPHLN1Q8NEY8 458 aaKnown RBP3.92□□□□□ -1.78
LTN1-207ENST00000614971 SEC16BQ96JE7 1060 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 MTG1Q9BT17 334 aaPredicted RBP3.92□□□□□ -1.78
LTN1-207ENST00000614971 CCDC90BQ9GZT6 254 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 DPEP3Q9H4B8 488 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 CD274Q9NZQ7 290 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 PSMC3IPQ9P2W1 217 aaPredicted RBP3.92□□□□□ -1.78
LTN1-207ENST00000614971 HAO1Q9UJM8 370 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 DIS3Q9Y2L1 958 aaKnown RBP3.92□□□□□ -1.78
LTN1-207ENST00000614971 CCDC88CQ9P219 2028 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 CACNA1CQ13936 2221 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 ZDBF2Q9HCK1 2354 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 CYP3A7-CYP3A51PA0A087WV96 503 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 GLTPD2A6NH11 291 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 SPATA31C2B4DYI2 1134 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 CYBBP04839 570 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 POLBP06746 335 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 ACRP10323 421 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 CDC25CP30307 473 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 STX3Q13277 289 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 PPIL2Q13356 520 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 GALNTL6Q49A17 601 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 RAP1GAP2Q684P5 730 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 LBX2Q6XYB7 198 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 ILDR2Q71H61 639 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 STRA8Q7Z7C7 330 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 GBP7Q8N8V2 638 aaPredicted RBP3.92□□□□□ -1.78
LTN1-207ENST00000614971 RDM1Q8NG50 284 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 KLHL5Q96PQ7 755 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 CPXM1Q96SM3 734 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 KCNK16Q96T55 309 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 APBA2Q99767 749 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 ACO2Q99798 780 aaKnown RBP3.92□□□□□ -1.78
LTN1-207ENST00000614971 PABPC3Q9H361 631 aaKnown RBP3.92□□□□□ -1.78
LTN1-207ENST00000614971 MINDY3Q9H8M7 445 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 HMGXB4Q9UGU5 601 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 R3HDM2Q9Y2K5 976 aaKnown RBP3.92□□□□□ -1.78
LTN1-207ENST00000614971 RTTNQ86VV8 2226 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 IGLV3-22A0A075B6J6 115 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 RNF103-CHMP3A0A140T963 221 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 CHEK2O96017 543 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 URODP06132 367 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 ASGR1P07306 291 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 SYN1P17600 705 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 TAC1P20366 129 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 FNTAP49354 379 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 PRKCZQ05513 592 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 DUSP4Q13115 394 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 PKN2Q16513 984 aaKnown RBP3.92□□□□□ -1.78
LTN1-207ENST00000614971 BOLA3Q53S33 107 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 PAPD7Q5XG87 772 aaKnown RBP3.92□□□□□ -1.78
LTN1-207ENST00000614971 MTHFD1LQ6UB35 978 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 MARK2Q7KZI7 788 aaKnown RBP3.92□□□□□ -1.78
LTN1-207ENST00000614971 IRF2BP2Q7Z5L9 587 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 CIR1Q86X95 450 aaPredicted RBP3.92□□□□□ -1.78
LTN1-207ENST00000614971 DCP1BQ8IZD4 617 aaKnown RBP3.92□□□□□ -1.78
LTN1-207ENST00000614971 DCBLD1Q8N8Z6 715 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 AUTS2Q8WXX7 1259 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 N4BP2L2Q92802 583 aaPredicted RBP3.92□□□□□ -1.78
LTN1-207ENST00000614971 MARK4Q96L34 752 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 TMEM237Q96Q45 408 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 PAFAH2Q99487 392 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 CINPQ9BW66 212 aaPredicted RBP3.92□□□□□ -1.78
LTN1-207ENST00000614971 GANQ9H2C0 597 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 RNF39Q9H2S5 420 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 VCXQ9H320 206 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 THEGQ9P2T0 379 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 LSM7Q9UK45 103 aaKnown RBP3.92□□□□□ -1.78
LTN1-207ENST00000614971 NAALADL1Q9UQQ1 740 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 BCL9LQ86UU0 1499 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.92□□□□□ -1.78
LTN1-207ENST00000614971 EIF3HO15372 352 aaKnown RBP eCLIP3.92□□□□□ -1.78
LTN1-207ENST00000614971 STX7O15400 261 aaKnown RBP3.92□□□□□ -1.78
LTN1-207ENST00000614971 RHOBTB1O94844 696 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 TTC4O95801 387 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 ALDH1A1P00352 501 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 SMPD1P17405 629 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 LMO2P25791 158 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 CHKAP35790 457 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 TAP1Q03518 808 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 ZNF177Q13360 481 aaPredicted RBP3.92□□□□□ -1.78
LTN1-207ENST00000614971 CYTH1Q15438 398 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 CCDC142Q17RM4 750 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 LRRC73Q5JTD7 316 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 PPP1R2P3Q6NXS1 205 aa3.92□□□□□ -1.78
LTN1-207ENST00000614971 PPIL6Q8IXY8 311 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms