RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 STON1Q9Y6Q2 735 aa18.19■□□□□ 0.5
CSNK1E-215ENST00000612795 CABIN1Q9Y6J0 2220 aa18.18■□□□□ 0.5
CSNK1E-215ENST00000612795 TRABD2BA6NFA1 517 aa18.18■□□□□ 0.5
CSNK1E-215ENST00000612795 ZDHHC11BP0C7U3 371 aa18.18■□□□□ 0.5
CSNK1E-215ENST00000612795 SNRNP35Q16560 246 aaKnown RBP18.18■□□□□ 0.5
CSNK1E-215ENST00000612795 HLA-BQ31612 363 aa18.18■□□□□ 0.5
CSNK1E-215ENST00000612795 LARP1BQ659C4 914 aaKnown RBP18.18■□□□□ 0.5
CSNK1E-215ENST00000612795 CCDC73Q6ZRK6 1079 aa18.18■□□□□ 0.5
CSNK1E-215ENST00000612795 METTL3Q86U44 580 aaKnown RBP18.18■□□□□ 0.5
CSNK1E-215ENST00000612795 MARCH9Q86YJ5 346 aa18.18■□□□□ 0.5
CSNK1E-215ENST00000612795 RDH13Q8NBN7 331 aa18.18■□□□□ 0.5
CSNK1E-215ENST00000612795 CCDC127Q96BQ5 260 aa18.18■□□□□ 0.5
CSNK1E-215ENST00000612795 TMX3Q96JJ7 454 aa18.18■□□□□ 0.5
CSNK1E-215ENST00000612795 TRIM9Q9C026 710 aa18.18■□□□□ 0.5
CSNK1E-215ENST00000612795 TOR4AQ9NXH8 423 aa18.18■□□□□ 0.5
CSNK1E-215ENST00000612795 MUC22E2RYF6 1773 aaPredicted RBP18.17■□□□□ 0.5
CSNK1E-215ENST00000612795 ASXL3Q9C0F0 2248 aa18.17■□□□□ 0.5
CSNK1E-215ENST00000612795 HELZ2Q9BYK8 2649 aaKnown RBP18.17■□□□□ 0.5
CSNK1E-215ENST00000612795 AP1G2O75843 785 aa18.17■□□□□ 0.5
CSNK1E-215ENST00000612795 NEFLP07196 543 aa18.17■□□□□ 0.5
CSNK1E-215ENST00000612795 OXTRP30559 389 aa18.17■□□□□ 0.5
CSNK1E-215ENST00000612795 CCDC157Q569K6 752 aa18.17■□□□□ 0.5
CSNK1E-215ENST00000612795 CACUL1Q86Y37 369 aa18.17■□□□□ 0.5
CSNK1E-215ENST00000612795 SCUBE3Q8IX30 993 aa18.17■□□□□ 0.5
CSNK1E-215ENST00000612795 ADAM32Q8TC27 787 aa18.17■□□□□ 0.5
CSNK1E-215ENST00000612795 SNX19Q92543 992 aa18.17■□□□□ 0.5
CSNK1E-215ENST00000612795 SYAP1Q96A49 352 aaPredicted RBP18.17■□□□□ 0.5
CSNK1E-215ENST00000612795 CRELD1Q96HD1 420 aa18.17■□□□□ 0.5
CSNK1E-215ENST00000612795 TNIP3Q96KP6 325 aa18.17■□□□□ 0.5
CSNK1E-215ENST00000612795 DCBLD2Q96PD2 775 aa18.17■□□□□ 0.5
CSNK1E-215ENST00000612795 UBL7Q96S82 380 aaPredicted RBP18.17■□□□□ 0.5
CSNK1E-215ENST00000612795 KLF16Q9BXK1 252 aaPredicted RBP18.17■□□□□ 0.5
CSNK1E-215ENST00000612795 MKRN2Q9H000 416 aaKnown RBP18.17■□□□□ 0.5
CSNK1E-215ENST00000612795 FBXO44Q9H4M3 255 aa18.17■□□□□ 0.5
CSNK1E-215ENST00000612795 SMYD3Q9H7B4 428 aa18.17■□□□□ 0.5
CSNK1E-215ENST00000612795 ITM2CQ9NQX7 267 aa18.17■□□□□ 0.5
CSNK1E-215ENST00000612795 PLK2Q9NYY3 685 aa18.17■□□□□ 0.5
CSNK1E-215ENST00000612795 IL37Q9NZH6 218 aa18.17■□□□□ 0.5
CSNK1E-215ENST00000612795 EIF2B4Q9UI10 523 aaKnown RBP18.17■□□□□ 0.5
CSNK1E-215ENST00000612795 PCDHGB2Q9Y5G2 931 aa18.17■□□□□ 0.5
CSNK1E-215ENST00000612795 FAM92AA1XBS5 289 aa18.16■□□□□ 0.5
CSNK1E-215ENST00000612795 KCNJ18B7U540 433 aa18.16■□□□□ 0.5
CSNK1E-215ENST00000612795 SYNCRIPO60506 623 aaKnown RBP18.16■□□□□ 0.5
CSNK1E-215ENST00000612795 ACADMP11310 421 aa18.16■□□□□ 0.5
CSNK1E-215ENST00000612795 ATP5C1P36542 298 aaKnown RBP18.16■□□□□ 0.5
CSNK1E-215ENST00000612795 ABCG1P45844 678 aa18.16■□□□□ 0.5
CSNK1E-215ENST00000612795 TPMTP51580 245 aa18.16■□□□□ 0.5
CSNK1E-215ENST00000612795 MYL6P60660 151 aa18.16■□□□□ 0.5
CSNK1E-215ENST00000612795 C19orf57Q0VDD7 668 aa18.16■□□□□ 0.5
CSNK1E-215ENST00000612795 SUZ12Q15022 739 aaKnown RBP18.16■□□□□ 0.5
CSNK1E-215ENST00000612795 PRCCQ92733 491 aaPredicted RBP18.16■□□□□ 0.5
CSNK1E-215ENST00000612795 SIPA1Q96FS4 1042 aa18.16■□□□□ 0.5
CSNK1E-215ENST00000612795 CLIC6Q96NY7 704 aa18.16■□□□□ 0.5
CSNK1E-215ENST00000612795 FBXO2Q9UK22 296 aaPredicted RBP18.16■□□□□ 0.5
CSNK1E-215ENST00000612795 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.16■□□□□ 0.5
CSNK1E-215ENST00000612795 KNL1Q8NG31 2342 aa18.16■□□□□ 0.5
CSNK1E-215ENST00000612795 NUMA1Q14980 2115 aa18.16■□□□□ 0.5
CSNK1E-215ENST00000612795 A0A087WV48 116 aa18.15■□□□□ 0.5
CSNK1E-215ENST00000612795 A0A1B0GVT2 93 aa18.15■□□□□ 0.5
CSNK1E-215ENST00000612795 FAM149AA5PLN7 773 aa18.15■□□□□ 0.5
CSNK1E-215ENST00000612795 METTL12A8MUP2 240 aa18.15■□□□□ 0.5
CSNK1E-215ENST00000612795 GREM1O60565 184 aa18.15■□□□□ 0.5
CSNK1E-215ENST00000612795 PHACTR2O75167 634 aa18.15■□□□□ 0.5
CSNK1E-215ENST00000612795 DKK1O94907 266 aa18.15■□□□□ 0.5
CSNK1E-215ENST00000612795 STAU1O95793 577 aaKnown RBP18.15■□□□□ 0.5
CSNK1E-215ENST00000612795 TBX18O95935 607 aa18.15■□□□□ 0.5
CSNK1E-215ENST00000612795 CISD3P0C7P0 127 aa18.15■□□□□ 0.5
CSNK1E-215ENST00000612795 ATICP31939 592 aa18.15■□□□□ 0.5
CSNK1E-215ENST00000612795 CYP2J2P51589 502 aa18.15■□□□□ 0.5
CSNK1E-215ENST00000612795 ZNF132P52740 706 aa18.15■□□□□ 0.5
CSNK1E-215ENST00000612795 BNC1Q01954 994 aa18.15■□□□□ 0.5
CSNK1E-215ENST00000612795 PSMD6Q15008 389 aa18.15■□□□□ 0.5
CSNK1E-215ENST00000612795 RABEP1Q15276 862 aa18.15■□□□□ 0.5
CSNK1E-215ENST00000612795 SCARA5Q6ZMJ2 495 aa18.15■□□□□ 0.5
CSNK1E-215ENST00000612795 PAQR9Q6ZVX9 377 aa18.15■□□□□ 0.5
CSNK1E-215ENST00000612795 TMPRSS6Q8IU80 811 aa18.15■□□□□ 0.5
CSNK1E-215ENST00000612795 ENGASEQ8NFI3 743 aa18.15■□□□□ 0.5
CSNK1E-215ENST00000612795 UCMAQ8WVF2 138 aa18.15■□□□□ 0.5
CSNK1E-215ENST00000612795 SRPRBQ9Y5M8 271 aaKnown RBP18.15■□□□□ 0.5
CSNK1E-215ENST00000612795 CLIC4Q9Y696 253 aa18.15■□□□□ 0.5
CSNK1E-215ENST00000612795 BPTFQ12830 3046 aa18.15■□□□□ 0.5
CSNK1E-215ENST00000612795 FLNBO75369 2602 aaKnown RBP18.14■□□□□ 0.49
CSNK1E-215ENST00000612795 NPC1O15118 1278 aa18.14■□□□□ 0.49
CSNK1E-215ENST00000612795 IL12RB1P42701 662 aa18.14■□□□□ 0.49
CSNK1E-215ENST00000612795 PGFP49763 221 aa18.14■□□□□ 0.49
CSNK1E-215ENST00000612795 CDH8P55286 799 aa18.14■□□□□ 0.49
CSNK1E-215ENST00000612795 CYP24A1Q07973 514 aa18.14■□□□□ 0.49
CSNK1E-215ENST00000612795 ZNF699Q32M78 642 aa18.14■□□□□ 0.49
CSNK1E-215ENST00000612795 FUKQ8N0W3 1084 aa18.14■□□□□ 0.49
CSNK1E-215ENST00000612795 PDCD7Q8N8D1 485 aaKnown RBP18.14■□□□□ 0.49
CSNK1E-215ENST00000612795 PIP4K2CQ8TBX8 421 aa18.14■□□□□ 0.49
CSNK1E-215ENST00000612795 HPS3Q969F9 1004 aa18.14■□□□□ 0.49
CSNK1E-215ENST00000612795 NUP58Q9BVL2 599 aa18.14■□□□□ 0.49
CSNK1E-215ENST00000612795 PANK2Q9BZ23 570 aa18.14■□□□□ 0.49
CSNK1E-215ENST00000612795 XYLT2Q9H1B5 865 aa18.14■□□□□ 0.49
CSNK1E-215ENST00000612795 CYLDQ9NQC7 956 aa18.14■□□□□ 0.49
CSNK1E-215ENST00000612795 BTBD3Q9Y2F9 522 aa18.14■□□□□ 0.49
CSNK1E-215ENST00000612795 VPS37CA5D8V6 355 aaPredicted RBP18.13■□□□□ 0.49
CSNK1E-215ENST00000612795 TNFSF14O43557 240 aa18.13■□□□□ 0.49
CSNK1E-215ENST00000612795 PRB1P04280 392 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms