RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 INPP5DQ92835 1189 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 SNX27Q96L92 541 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 CYTH2Q99418 400 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 CALN1Q9BXU9 219 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 VPS11Q9H270 941 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 CXCL16Q9H2A7 254 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 ETNK1Q9HBU6 452 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 RNF19AQ9NV58 838 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 KIAA1257Q9ULG3 409 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 BARX2Q9UMQ3 279 aaPredicted RBP15.28■□□□□ 0.04
CDH1-213ENST00000612417 TRIM33Q9UPN9 1127 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.28■□□□□ 0.04
CDH1-213ENST00000612417 C2CD2LO14523 706 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 CHADO15335 359 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 FKTNO75072 461 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 GNRH1P01148 92 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 GPD1P21695 349 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 BASP1P80723 227 aaKnown RBP15.28■□□□□ 0.04
CDH1-213ENST00000612417 ARHGEF6Q15052 776 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 BBS9Q3SYG4 887 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 SLC45A4Q5BKX6 768 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 GLRA4Q5JXX5 417 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 MAP3K21Q5TCX8 1036 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 SERINC5Q86VE9 423 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 WNT8BQ93098 351 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 TBC1D31Q96DN5 1066 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 RTP4Q96DX8 246 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 MRRFQ96E11 262 aaKnown RBP15.28■□□□□ 0.04
CDH1-213ENST00000612417 TMEM237Q96Q45 408 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 KLK14Q9P0G3 267 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 NOD1Q9Y239 953 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 TEX264Q9Y6I9 313 aa15.28■□□□□ 0.04
CDH1-213ENST00000612417 RALGAPA2Q2PPJ7 1873 aa15.27■□□□□ 0.04
CDH1-213ENST00000612417 ADRA1DP25100 572 aa15.27■□□□□ 0.03
CDH1-213ENST00000612417 CST5P28325 142 aaPredicted RBP15.27■□□□□ 0.03
CDH1-213ENST00000612417 THPOP40225 353 aa15.27■□□□□ 0.03
CDH1-213ENST00000612417 CCSAPQ6IQ19 270 aaPredicted RBP15.27■□□□□ 0.03
CDH1-213ENST00000612417 TRNP1Q6NT89 227 aa15.27■□□□□ 0.03
CDH1-213ENST00000612417 TLDC1Q6P9B6 456 aa15.27■□□□□ 0.03
CDH1-213ENST00000612417 LCLAT1Q6UWP7 414 aa15.27■□□□□ 0.03
CDH1-213ENST00000612417 VSIG1Q86XK7 387 aa15.27■□□□□ 0.03
CDH1-213ENST00000612417 AGGF1Q8N302 714 aaeCLIP15.27■□□□□ 0.03
CDH1-213ENST00000612417 TCP10LQ8TDR4 215 aa15.27■□□□□ 0.03
CDH1-213ENST00000612417 FRMD8Q9BZ67 464 aaPredicted RBP15.27■□□□□ 0.03
CDH1-213ENST00000612417 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.27■□□□□ 0.03
CDH1-213ENST00000612417 DERAQ9Y315 318 aa15.27■□□□□ 0.03
CDH1-213ENST00000612417 SCN1AP35498 2009 aa15.27■□□□□ 0.03
CDH1-213ENST00000612417 CDH6P55285 790 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 MMRN1Q13201 1228 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 UBXN11Q5T124 520 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 FYB2Q5VWT5 728 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 BEST2Q8NFU1 509 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 PXYLP1Q8TE99 480 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 ZNF296Q8WUU4 475 aaPredicted RBP15.26■□□□□ 0.03
CDH1-213ENST00000612417 SLC44A1Q8WWI5 657 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 UTP4Q969X6 686 aaKnown RBP15.26■□□□□ 0.03
CDH1-213ENST00000612417 HEXIM2Q96MH2 286 aaKnown RBP15.26■□□□□ 0.03
CDH1-213ENST00000612417 ZMAT2Q96NC0 199 aaKnown RBP15.26■□□□□ 0.03
CDH1-213ENST00000612417 PNPLA8Q9NP80 782 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 IQANK1A0A1B0GTG1 560 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 TCRBV9S1A1TA0A576 114 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 DPYSL4O14531 572 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 TRAFD1O14545 582 aaPredicted RBP15.26■□□□□ 0.03
CDH1-213ENST00000612417 FAM155BO75949 473 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 CHRNA1P02708 482 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 INHAP05111 366 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 DHRS4L1P0CG22 281 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 CYP3A5P20815 502 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 ELK3P41970 407 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 ATP11AP98196 1134 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 ITGA7Q13683 1181 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 PDK2Q15119 407 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 STILQ15468 1287 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 DARS2Q6PI48 645 aaKnown RBP15.26■□□□□ 0.03
CDH1-213ENST00000612417 FAM43BQ6ZT52 329 aaPredicted RBP15.26■□□□□ 0.03
CDH1-213ENST00000612417 CHSY1Q86X52 802 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 IGDCC3Q8IVU1 814 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 GIMAP7Q8NHV1 300 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 RXFP2Q8WXD0 754 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 C18orf25Q96B23 403 aaPredicted RBP15.26■□□□□ 0.03
CDH1-213ENST00000612417 STAMBPL1Q96FJ0 436 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 RNF157Q96PX1 679 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 RNF39Q9H2S5 420 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 NOP53Q9NZM5 478 aaKnown RBP15.26■□□□□ 0.03
CDH1-213ENST00000612417 TUBGCP4Q9UGJ1 667 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 ST3GAL5Q9UNP4 418 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 CHMP2BQ9UQN3 213 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 STK38LQ9Y2H1 464 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 IPPQ9Y573 584 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 BRCA2P51587 3418 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 CEP350Q5VT06 3117 aa15.26■□□□□ 0.03
CDH1-213ENST00000612417 CFAP69A5D8W1 941 aa15.25■□□□□ 0.03
CDH1-213ENST00000612417 A8MUI8 341 aa15.25■□□□□ 0.03
CDH1-213ENST00000612417 HGSO14964 777 aaPredicted RBP15.25■□□□□ 0.03
CDH1-213ENST00000612417 PRPSAP2O60256 369 aa15.25■□□□□ 0.03
CDH1-213ENST00000612417 PDGFRAP16234 1089 aa15.25■□□□□ 0.03
CDH1-213ENST00000612417 CALRP27797 417 aaKnown RBP15.25■□□□□ 0.03
CDH1-213ENST00000612417 MAGEA6P43360 314 aa15.25■□□□□ 0.03
CDH1-213ENST00000612417 NDST1P52848 882 aa15.25■□□□□ 0.03
CDH1-213ENST00000612417 ACLYP53396 1101 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms