RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 ZCWPW2Q504Y3 356 aa18.73■□□□□ 0.59
SSBP1-215ENST00000612337 PSAPL1Q6NUJ1 521 aa18.73■□□□□ 0.59
SSBP1-215ENST00000612337 PGBD3Q8N328 593 aa18.73■□□□□ 0.59
SSBP1-215ENST00000612337 FRMD1Q8N878 549 aa18.73■□□□□ 0.59
SSBP1-215ENST00000612337 PIGKQ92643 395 aa18.73■□□□□ 0.59
SSBP1-215ENST00000612337 BBS2Q9BXC9 721 aa18.73■□□□□ 0.59
SSBP1-215ENST00000612337 DUSP16Q9BY84 665 aa18.73■□□□□ 0.59
SSBP1-215ENST00000612337 SCAND2PQ9GZW5 306 aaPredicted RBP18.73■□□□□ 0.59
SSBP1-215ENST00000612337 MMRN2Q9H8L6 949 aa18.73■□□□□ 0.59
SSBP1-215ENST00000612337 TMEM9BQ9NQ34 198 aa18.73■□□□□ 0.59
SSBP1-215ENST00000612337 DNAJC17Q9NVM6 304 aaKnown RBP18.73■□□□□ 0.59
SSBP1-215ENST00000612337 WDR35Q9P2L0 1181 aa18.73■□□□□ 0.59
SSBP1-215ENST00000612337 EVLQ9UI08 416 aaPredicted RBP18.73■□□□□ 0.59
SSBP1-215ENST00000612337 DNMT3LQ9UJW3 386 aa18.73■□□□□ 0.59
SSBP1-215ENST00000612337 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.72■□□□□ 0.59
SSBP1-215ENST00000612337 NEDD8-MDP1E9PL57 170 aa18.72■□□□□ 0.59
SSBP1-215ENST00000612337 TYRP14679 529 aa18.72■□□□□ 0.59
SSBP1-215ENST00000612337 NTSR1P30989 418 aa18.72■□□□□ 0.59
SSBP1-215ENST00000612337 PLA2G4AP47712 749 aa18.72■□□□□ 0.59
SSBP1-215ENST00000612337 PSEN1P49768 467 aa18.72■□□□□ 0.59
SSBP1-215ENST00000612337 PPP1R26Q5T8A7 1209 aaPredicted RBP18.72■□□□□ 0.59
SSBP1-215ENST00000612337 KRT39Q6A163 491 aa18.72■□□□□ 0.59
SSBP1-215ENST00000612337 TPGS1Q6ZTW0 290 aa18.72■□□□□ 0.59
SSBP1-215ENST00000612337 CCDC186Q7Z3E2 898 aa18.72■□□□□ 0.59
SSBP1-215ENST00000612337 MIB1Q86YT6 1006 aa18.72■□□□□ 0.59
SSBP1-215ENST00000612337 TMEFF1Q8IYR6 380 aa18.72■□□□□ 0.59
SSBP1-215ENST00000612337 ZNF276Q8N554 614 aa18.72■□□□□ 0.59
SSBP1-215ENST00000612337 FAXDC2Q96IV6 333 aa18.72■□□□□ 0.59
SSBP1-215ENST00000612337 ATP6V1DQ9Y5K8 247 aa18.72■□□□□ 0.59
SSBP1-215ENST00000612337 USP3Q9Y6I4 520 aa18.72■□□□□ 0.59
SSBP1-215ENST00000612337 PI4KAP42356 2102 aa18.71■□□□□ 0.59
SSBP1-215ENST00000612337 CFAP47Q6ZTR5 3102 aa18.71■□□□□ 0.59
SSBP1-215ENST00000612337 CDX4O14627 284 aaPredicted RBP18.71■□□□□ 0.59
SSBP1-215ENST00000612337 MDM4O15151 490 aa18.71■□□□□ 0.59
SSBP1-215ENST00000612337 HOXB2P14652 356 aa18.71■□□□□ 0.59
SSBP1-215ENST00000612337 DPP6P42658 865 aa18.71■□□□□ 0.59
SSBP1-215ENST00000612337 PTGER3P43115 390 aa18.71■□□□□ 0.59
SSBP1-215ENST00000612337 IRX4P78413 519 aa18.71■□□□□ 0.59
SSBP1-215ENST00000612337 ST3GAL2Q16842 350 aa18.71■□□□□ 0.59
SSBP1-215ENST00000612337 C10orf120Q5SQS8 335 aa18.71■□□□□ 0.59
SSBP1-215ENST00000612337 Q6ZNB5 142 aa18.71■□□□□ 0.59
SSBP1-215ENST00000612337 TADA2BQ86TJ2 420 aa18.71■□□□□ 0.59
SSBP1-215ENST00000612337 SYT12Q8IV01 421 aa18.71■□□□□ 0.59
SSBP1-215ENST00000612337 TTC39CQ8N584 583 aa18.71■□□□□ 0.59
SSBP1-215ENST00000612337 GOLPH3LQ9H4A5 285 aa18.71■□□□□ 0.59
SSBP1-215ENST00000612337 NAGPAQ9UK23 515 aa18.71■□□□□ 0.59
SSBP1-215ENST00000612337 NUDT5Q9UKK9 219 aa18.71■□□□□ 0.59
SSBP1-215ENST00000612337 A0A1W2PQF6 199 aa18.7■□□□□ 0.58
SSBP1-215ENST00000612337 KRT37O76014 449 aa18.7■□□□□ 0.58
SSBP1-215ENST00000612337 ZNF202O95125 648 aa18.7■□□□□ 0.58
SSBP1-215ENST00000612337 GABRG2P18507 467 aa18.7■□□□□ 0.58
SSBP1-215ENST00000612337 NOVA1P51513 510 aaKnown RBP18.7■□□□□ 0.58
SSBP1-215ENST00000612337 LMAN2Q12907 356 aa18.7■□□□□ 0.58
SSBP1-215ENST00000612337 EDRF1Q3B7T1 1238 aa18.7■□□□□ 0.58
SSBP1-215ENST00000612337 TRIM61Q5EBN2 209 aa18.7■□□□□ 0.58
SSBP1-215ENST00000612337 LYSMD4Q5XG99 296 aa18.7■□□□□ 0.58
SSBP1-215ENST00000612337 EGFLAMQ63HQ2 1017 aa18.7■□□□□ 0.58
SSBP1-215ENST00000612337 SDE2Q6IQ49 451 aa18.7■□□□□ 0.58
SSBP1-215ENST00000612337 ARMCX6Q7L4S7 300 aa18.7■□□□□ 0.58
SSBP1-215ENST00000612337 SCD5Q86SK9 330 aa18.7■□□□□ 0.58
SSBP1-215ENST00000612337 CDK5RAP1Q96SZ6 601 aaKnown RBP18.7■□□□□ 0.58
SSBP1-215ENST00000612337 NUSAP1Q9BXS6 441 aaKnown RBP18.7■□□□□ 0.58
SSBP1-215ENST00000612337 TMEM74BQ9NUR3 256 aa18.7■□□□□ 0.58
SSBP1-215ENST00000612337 CLIC5Q9NZA1 410 aa18.7■□□□□ 0.58
SSBP1-215ENST00000612337 CALCOCO1Q9P1Z2 691 aa18.7■□□□□ 0.58
SSBP1-215ENST00000612337 ASCC3Q8N3C0 2202 aaKnown RBP18.7■□□□□ 0.58
SSBP1-215ENST00000612337 PRRT4C9JH25 899 aa18.69■□□□□ 0.58
SSBP1-215ENST00000612337 AP5Z1O43299 807 aa18.69■□□□□ 0.58
SSBP1-215ENST00000612337 RALAP11233 206 aa18.69■□□□□ 0.58
SSBP1-215ENST00000612337 WASP42768 502 aa18.69■□□□□ 0.58
SSBP1-215ENST00000612337 MXI1P50539 228 aa18.69■□□□□ 0.58
SSBP1-215ENST00000612337 ZNF394Q53GI3 561 aa18.69■□□□□ 0.58
SSBP1-215ENST00000612337 PEAR1Q5VY43 1037 aaPredicted RBP18.69■□□□□ 0.58
SSBP1-215ENST00000612337 SLC36A4Q6YBV0 504 aa18.69■□□□□ 0.58
SSBP1-215ENST00000612337 TOGARAM2Q6ZUX3 1019 aa18.69■□□□□ 0.58
SSBP1-215ENST00000612337 CHPFQ8IZ52 775 aa18.69■□□□□ 0.58
SSBP1-215ENST00000612337 FBXL13Q8NEE6 735 aa18.69■□□□□ 0.58
SSBP1-215ENST00000612337 SEMA4DQ92854 862 aa18.69■□□□□ 0.58
SSBP1-215ENST00000612337 HEXIM2Q96MH2 286 aaKnown RBP18.69■□□□□ 0.58
SSBP1-215ENST00000612337 ACOX2Q99424 681 aa18.69■□□□□ 0.58
SSBP1-215ENST00000612337 GABRG3Q99928 467 aa18.69■□□□□ 0.58
SSBP1-215ENST00000612337 FAM124BQ9H5Z6 455 aaPredicted RBP18.69■□□□□ 0.58
SSBP1-215ENST00000612337 CD248Q9HCU0 757 aa18.69■□□□□ 0.58
SSBP1-215ENST00000612337 PILRBQ9UKJ0 227 aa18.69■□□□□ 0.58
SSBP1-215ENST00000612337 ZNF510Q9Y2H8 683 aa18.69■□□□□ 0.58
SSBP1-215ENST00000612337 GIPC1O14908 333 aa18.68■□□□□ 0.58
SSBP1-215ENST00000612337 ZBTB24O43167 697 aaPredicted RBP18.68■□□□□ 0.58
SSBP1-215ENST00000612337 STX10O60499 249 aa18.68■□□□□ 0.58
SSBP1-215ENST00000612337 STC2O76061 302 aa18.68■□□□□ 0.58
SSBP1-215ENST00000612337 CISD3P0C7P0 127 aa18.68■□□□□ 0.58
SSBP1-215ENST00000612337 CSRP1P21291 193 aaKnown RBP18.68■□□□□ 0.58
SSBP1-215ENST00000612337 HOXD12P35452 270 aa18.68■□□□□ 0.58
SSBP1-215ENST00000612337 DGKGP49619 791 aa18.68■□□□□ 0.58
SSBP1-215ENST00000612337 RPL6Q02878 288 aaKnown RBP18.68■□□□□ 0.58
SSBP1-215ENST00000612337 SH3PXD2AQ5TCZ1 1133 aa18.68■□□□□ 0.58
SSBP1-215ENST00000612337 SLC23A3Q6PIS1 610 aa18.68■□□□□ 0.58
SSBP1-215ENST00000612337 SLC4A11Q8NBS3 891 aa18.68■□□□□ 0.58
SSBP1-215ENST00000612337 IPO4Q8TEX9 1081 aaKnown RBP18.68■□□□□ 0.58
SSBP1-215ENST00000612337 CCDC34Q96HJ3 373 aa18.68■□□□□ 0.58
SSBP1-215ENST00000612337 UBXN6Q9BZV1 441 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms