RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 CRLF3Q8IUI8 442 aa11.43□□□□□ -0.58
CDH4-202ENST00000611855 C4orf19Q8IY42 314 aa11.43□□□□□ -0.58
CDH4-202ENST00000611855 UNC5BQ8IZJ1 945 aa11.43□□□□□ -0.58
CDH4-202ENST00000611855 DEFB107AQ8IZN7 70 aa11.43□□□□□ -0.58
CDH4-202ENST00000611855 AGR3Q8TD06 166 aa11.43□□□□□ -0.58
CDH4-202ENST00000611855 SSU72Q9NP77 194 aaKnown RBP11.43□□□□□ -0.58
CDH4-202ENST00000611855 ANLNQ9NQW6 1124 aa11.43□□□□□ -0.58
CDH4-202ENST00000611855 XPNPEP1Q9NQW7 623 aa11.43□□□□□ -0.58
CDH4-202ENST00000611855 SMYD2Q9NRG4 433 aa11.43□□□□□ -0.58
CDH4-202ENST00000611855 UBAP1Q9NZ09 502 aa11.43□□□□□ -0.58
CDH4-202ENST00000611855 CNTN3Q9P232 1028 aa11.43□□□□□ -0.58
CDH4-202ENST00000611855 CIDEBQ9UHD4 219 aa11.43□□□□□ -0.58
CDH4-202ENST00000611855 A0A0B4J269 797 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 WDR64B1ANS9 1081 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 H7C0C1 242 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 ITM2AO43736 263 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 LRCH4O75427 683 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 RAD17O75943 681 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 SRGAP2CP0DJJ0 459 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 SRGAP2BP0DMP2 458 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 TNFSF9P41273 254 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 RAP1GAPP47736 663 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 ATP5OP48047 213 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 RPL10AP62906 217 aaKnown RBP11.42□□□□□ -0.58
CDH4-202ENST00000611855 KRT81Q14533 505 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 PDK1Q15118 436 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 GRAMD4Q6IC98 578 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 TRMT10BQ6PF06 316 aaKnown RBP11.42□□□□□ -0.58
CDH4-202ENST00000611855 AMIGO2Q86SJ2 522 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 ZBTB46Q86UZ6 589 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 CHSY1Q86X52 802 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 NDUFAF2Q8N183 169 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 RMDN3Q96TC7 470 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 MSTO1Q9BUK6 570 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 ACSS2Q9NR19 701 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 TBC1D30Q9Y2I9 924 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 HEY1Q9Y5J3 304 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 NR2E3Q9Y5X4 410 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 BTAF1O14981 1849 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 A0A1B0GTW7 788 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 RBM47A0AV96 593 aaKnown RBP11.42□□□□□ -0.58
CDH4-202ENST00000611855 TRIM43BA6NCK2 446 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 C3orf70A6NLC5 250 aaPredicted RBP11.42□□□□□ -0.58
CDH4-202ENST00000611855 EXTL3O43909 919 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 TRMUO75648 421 aaKnown RBP11.42□□□□□ -0.58
CDH4-202ENST00000611855 KCNA4P22459 653 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 FDFT1P37268 417 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 MLH1P40692 756 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 STT3AP46977 705 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 OSTNP61366 133 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 ITGA9Q13797 1035 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 CCNIQ14094 377 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 HNRNPDQ14103 355 aaKnown RBP11.42□□□□□ -0.58
CDH4-202ENST00000611855 MAP3K21Q5TCX8 1036 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 WDTC1Q8N5D0 677 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 SYTL5Q8TDW5 730 aaPredicted RBP11.42□□□□□ -0.58
CDH4-202ENST00000611855 LZICQ8WZA0 190 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 GPAMQ9HCL2 828 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 NXF1Q9UBU9 619 aaKnown RBP11.42□□□□□ -0.58
CDH4-202ENST00000611855 FBXO40Q9UH90 709 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 GRAP2O75791 330 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 EDN1P05305 212 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 APRTP07741 180 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 SLC5A2P31639 672 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 STIP1P31948 543 aaKnown RBP11.42□□□□□ -0.58
CDH4-202ENST00000611855 ALDH1A3P47895 512 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 MYL6P60660 151 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 NAA20P61599 178 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 C6orf52Q5T4I8 152 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 DENND1BQ6P3S1 775 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 TRIM72Q6ZMU5 477 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 SH2D5Q6ZV89 423 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 PCGF5Q86SE9 256 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 CDR2LQ86X02 465 aaPredicted RBP11.42□□□□□ -0.58
CDH4-202ENST00000611855 PPP1R36Q96LQ0 422 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 TCHPQ9BT92 498 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 MTMR12Q9C0I1 747 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 TMEM39BQ9GZU3 492 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 GPATCH2LQ9NWQ4 482 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 KCNK4Q9NYG8 393 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 ZC3H7BQ9UGR2 993 aaKnown RBP11.42□□□□□ -0.58
CDH4-202ENST00000611855 UBIAD1Q9Y5Z9 338 aa11.42□□□□□ -0.58
CDH4-202ENST00000611855 MCF2LO15068 1137 aa11.41□□□□□ -0.58
CDH4-202ENST00000611855 TBC1D12O60347 775 aa11.41□□□□□ -0.58
CDH4-202ENST00000611855 TGDSO95455 350 aa11.41□□□□□ -0.58
CDH4-202ENST00000611855 CSH1P0DML2 217 aa11.41□□□□□ -0.58
CDH4-202ENST00000611855 CSH2P0DML3 217 aa11.41□□□□□ -0.58
CDH4-202ENST00000611855 KRT3P12035 628 aa11.41□□□□□ -0.58
CDH4-202ENST00000611855 CD1EP15812 388 aa11.41□□□□□ -0.58
CDH4-202ENST00000611855 KDELR1P24390 212 aa11.41□□□□□ -0.58
CDH4-202ENST00000611855 VARSP26640 1264 aaKnown RBP11.41□□□□□ -0.58
CDH4-202ENST00000611855 TBL3Q12788 808 aaKnown RBP11.41□□□□□ -0.58
CDH4-202ENST00000611855 TRIML2Q8N7C3 387 aa11.41□□□□□ -0.58
CDH4-202ENST00000611855 CLEC4DQ8WXI8 215 aa11.41□□□□□ -0.58
CDH4-202ENST00000611855 DCUN1D1Q96GG9 259 aa11.41□□□□□ -0.58
CDH4-202ENST00000611855 PLLPQ9Y342 182 aa11.41□□□□□ -0.58
CDH4-202ENST00000611855 HBS1LQ9Y450 684 aaKnown RBP11.41□□□□□ -0.58
CDH4-202ENST00000611855 ARHGAP10A1A4S6 786 aa11.41□□□□□ -0.58
CDH4-202ENST00000611855 STRNO43815 780 aa11.41□□□□□ -0.58
CDH4-202ENST00000611855 ZC3H11AO75152 810 aaKnown RBP eCLIP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms