RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 RNF139Q8WU17 664 aa27.26■■□□□ 1.95
VEGFA-226ENST00000611736 IRGQQ8WZA9 623 aa27.26■■□□□ 1.95
VEGFA-226ENST00000611736 STRIP2Q9ULQ0 834 aa27.26■■□□□ 1.95
VEGFA-226ENST00000611736 F8VZ95 297 aa27.25■■□□□ 1.95
VEGFA-226ENST00000611736 TRDMT1O14717 391 aaKnown RBP27.25■■□□□ 1.95
VEGFA-226ENST00000611736 EPHB6O15197 1021 aa27.25■■□□□ 1.95
VEGFA-226ENST00000611736 GREM1O60565 184 aa27.25■■□□□ 1.95
VEGFA-226ENST00000611736 HOXD11P31277 338 aaPredicted RBP27.25■■□□□ 1.95
VEGFA-226ENST00000611736 KRT9P35527 623 aa27.25■■□□□ 1.95
VEGFA-226ENST00000611736 ACADSBP45954 432 aa27.25■■□□□ 1.95
VEGFA-226ENST00000611736 BPIFB4P59827 614 aa27.25■■□□□ 1.95
VEGFA-226ENST00000611736 GRSF1Q12849 480 aaKnown RBP eCLIP27.25■■□□□ 1.95
VEGFA-226ENST00000611736 RHBDF2Q6PJF5 856 aa27.25■■□□□ 1.95
VEGFA-226ENST00000611736 HTR3DQ70Z44 454 aa27.25■■□□□ 1.95
VEGFA-226ENST00000611736 SCUBE3Q8IX30 993 aa27.25■■□□□ 1.95
VEGFA-226ENST00000611736 STK32AQ8WU08 396 aa27.25■■□□□ 1.95
VEGFA-226ENST00000611736 OTUB2Q96DC9 234 aa27.25■■□□□ 1.95
VEGFA-226ENST00000611736 P2RY13Q9BPV8 354 aa27.25■■□□□ 1.95
VEGFA-226ENST00000611736 SLC4A5Q9BY07 1137 aa27.25■■□□□ 1.95
VEGFA-226ENST00000611736 IRF2BPLQ9H1B7 796 aa27.25■■□□□ 1.95
VEGFA-226ENST00000611736 CHRDQ9H2X0 955 aa27.25■■□□□ 1.95
VEGFA-226ENST00000611736 NLRC4Q9NPP4 1024 aa27.25■■□□□ 1.95
VEGFA-226ENST00000611736 PCDHGC3Q9UN70 934 aa27.25■■□□□ 1.95
VEGFA-226ENST00000611736 VPS13AQ96RL7 3174 aa27.25■■□□□ 1.95
VEGFA-226ENST00000611736 SLC12A8A0AV02 714 aa27.24■■□□□ 1.95
VEGFA-226ENST00000611736 STC2O76061 302 aa27.24■■□□□ 1.95
VEGFA-226ENST00000611736 ADH1CP00326 375 aa27.24■■□□□ 1.95
VEGFA-226ENST00000611736 RPL34P49207 117 aaKnown RBP27.24■■□□□ 1.95
VEGFA-226ENST00000611736 GALK1P51570 392 aa27.24■■□□□ 1.95
VEGFA-226ENST00000611736 COG7P83436 770 aa27.24■■□□□ 1.95
VEGFA-226ENST00000611736 MTAPQ13126 283 aa27.24■■□□□ 1.95
VEGFA-226ENST00000611736 PDCLQ13371 301 aa27.24■■□□□ 1.95
VEGFA-226ENST00000611736 IQCB1Q15051 598 aa27.24■■□□□ 1.95
VEGFA-226ENST00000611736 TMEM196Q5HYL7 178 aa27.24■■□□□ 1.95
VEGFA-226ENST00000611736 DGKKQ5KSL6 1271 aa27.24■■□□□ 1.95
VEGFA-226ENST00000611736 LY6G5CQ5SRR4 150 aa27.24■■□□□ 1.95
VEGFA-226ENST00000611736 FSTL4Q6MZW2 842 aa27.24■■□□□ 1.95
VEGFA-226ENST00000611736 GOLGA1Q92805 767 aa27.24■■□□□ 1.95
VEGFA-226ENST00000611736 FBRSL1Q9HCM7 1045 aaKnown RBP27.24■■□□□ 1.95
VEGFA-226ENST00000611736 ABCC13Q9NSE7 274 aa27.24■■□□□ 1.95
VEGFA-226ENST00000611736 OLA1Q9NTK5 396 aaKnown RBP27.24■■□□□ 1.95
VEGFA-226ENST00000611736 E5RJQ4 531 aa27.23■■□□□ 1.95
VEGFA-226ENST00000611736 LTFP02788 710 aa27.23■■□□□ 1.95
VEGFA-226ENST00000611736 ADH5P11766 374 aa27.23■■□□□ 1.95
VEGFA-226ENST00000611736 CCINQ13939 588 aa27.23■■□□□ 1.95
VEGFA-226ENST00000611736 GAB4Q2WGN9 574 aa27.23■■□□□ 1.95
VEGFA-226ENST00000611736 Q6ZS52 159 aa27.23■■□□□ 1.95
VEGFA-226ENST00000611736 FMNL3Q8IVF7 1028 aa27.23■■□□□ 1.95
VEGFA-226ENST00000611736 WDTC1Q8N5D0 677 aa27.23■■□□□ 1.95
VEGFA-226ENST00000611736 C1orf131Q8NDD1 294 aaKnown RBP27.23■■□□□ 1.95
VEGFA-226ENST00000611736 NEK11Q8NG66 645 aa27.23■■□□□ 1.95
VEGFA-226ENST00000611736 CD101Q93033 1021 aa27.23■■□□□ 1.95
VEGFA-226ENST00000611736 EXOC4Q96A65 974 aa27.23■■□□□ 1.95
VEGFA-226ENST00000611736 CBX8Q9HC52 389 aa27.23■■□□□ 1.95
VEGFA-226ENST00000611736 SFMBT1Q9UHJ3 866 aa27.23■■□□□ 1.95
VEGFA-226ENST00000611736 EGFP01133 1207 aa27.22■■□□□ 1.95
VEGFA-226ENST00000611736 CYP11B1P15538 503 aa27.22■■□□□ 1.95
VEGFA-226ENST00000611736 TAF3Q5VWG9 929 aa27.22■■□□□ 1.95
VEGFA-226ENST00000611736 ATOH1Q92858 354 aaPredicted RBP27.22■■□□□ 1.95
VEGFA-226ENST00000611736 FAM149B1Q96BN6 582 aa27.22■■□□□ 1.95
VEGFA-226ENST00000611736 ERGIC2Q96RQ1 377 aa27.22■■□□□ 1.95
VEGFA-226ENST00000611736 LHX5Q9H2C1 402 aa27.22■■□□□ 1.95
VEGFA-226ENST00000611736 PDCL3Q9H2J4 239 aa27.22■■□□□ 1.95
VEGFA-226ENST00000611736 FAM86C1Q9NVL1 165 aa27.22■■□□□ 1.95
VEGFA-226ENST00000611736 TJP2Q9UDY2 1190 aa27.22■■□□□ 1.95
VEGFA-226ENST00000611736 CEP83Q9Y592 693 aa27.22■■□□□ 1.95
VEGFA-226ENST00000611736 PAPSS1O43252 624 aaPredicted RBP27.21■■□□□ 1.95
VEGFA-226ENST00000611736 LAMTOR5O43504 91 aa27.21■■□□□ 1.95
VEGFA-226ENST00000611736 GFPT2O94808 682 aa27.21■■□□□ 1.95
VEGFA-226ENST00000611736 OPRD1P41143 372 aa27.21■■□□□ 1.95
VEGFA-226ENST00000611736 Q6ZNB5 142 aa27.21■■□□□ 1.95
VEGFA-226ENST00000611736 TMEM110Q86TL2 294 aa27.21■■□□□ 1.95
VEGFA-226ENST00000611736 TMEM25Q86YD3 366 aa27.21■■□□□ 1.95
VEGFA-226ENST00000611736 PPP1R13BQ96KQ4 1090 aa27.21■■□□□ 1.95
VEGFA-226ENST00000611736 SPAG5Q96R06 1193 aa27.21■■□□□ 1.95
VEGFA-226ENST00000611736 CPXM1Q96SM3 734 aa27.21■■□□□ 1.95
VEGFA-226ENST00000611736 SPHK2Q9NRA0 654 aa27.21■■□□□ 1.95
VEGFA-226ENST00000611736 TEX33O43247 280 aa27.2■■□□□ 1.94
VEGFA-226ENST00000611736 SART1O43290 800 aaKnown RBP27.2■■□□□ 1.94
VEGFA-226ENST00000611736 KLKB1P03952 638 aa27.2■■□□□ 1.94
VEGFA-226ENST00000611736 DRD1P21728 446 aa27.2■■□□□ 1.94
VEGFA-226ENST00000611736 CORO1AP31146 461 aaKnown RBP27.2■■□□□ 1.94
VEGFA-226ENST00000611736 JAM2P57087 298 aa27.2■■□□□ 1.94
VEGFA-226ENST00000611736 GAS6Q14393 721 aa27.2■■□□□ 1.94
VEGFA-226ENST00000611736 ANO4Q32M45 955 aa27.2■■□□□ 1.94
VEGFA-226ENST00000611736 NOP9Q86U38 636 aaKnown RBP27.2■■□□□ 1.94
VEGFA-226ENST00000611736 LUZP1Q86V48 1076 aa27.2■■□□□ 1.94
VEGFA-226ENST00000611736 NOX5Q96PH1 765 aa27.2■■□□□ 1.94
VEGFA-226ENST00000611736 MSI1O43347 362 aaKnown RBP27.19■■□□□ 1.94
VEGFA-226ENST00000611736 SOX5P35711 763 aa27.19■■□□□ 1.94
VEGFA-226ENST00000611736 SLC6A11P48066 632 aa27.19■■□□□ 1.94
VEGFA-226ENST00000611736 GAD2Q05329 585 aa27.19■■□□□ 1.94
VEGFA-226ENST00000611736 MSANTD2Q6P1R3 559 aa27.19■■□□□ 1.94
VEGFA-226ENST00000611736 C12orf40Q86WS4 652 aa27.19■■□□□ 1.94
VEGFA-226ENST00000611736 MAML2Q8IZL2 1156 aaPredicted RBP27.19■■□□□ 1.94
VEGFA-226ENST00000611736 PLD4Q96BZ4 506 aa27.19■■□□□ 1.94
VEGFA-226ENST00000611736 IER2Q9BTL4 223 aa27.19■■□□□ 1.94
VEGFA-226ENST00000611736 DCLK3Q9C098 648 aa27.19■■□□□ 1.94
VEGFA-226ENST00000611736 RTN4Q9NQC3 1192 aaKnown RBP27.19■■□□□ 1.94
VEGFA-226ENST00000611736 DAAM1Q9Y4D1 1078 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms