RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 CDHR5Q9HBB8 845 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 TXLNGQ9NUQ3 528 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 CHMP2BQ9UQN3 213 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 CLEC11AQ9Y240 323 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 GINS2Q9Y248 185 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 NME7Q9Y5B8 376 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 HEY1Q9Y5J3 304 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 TRIP11Q15643 1979 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 KBTBD13C9JR72 458 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 KRT37O76014 449 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 IL1BP01584 269 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 GNAT1P11488 350 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 CCNB1P14635 433 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 NQO1P15559 274 aaKnown RBP10.83□□□□□ -0.68
PABPC1-224ENST00000610907 PRKCHP24723 683 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 LRPAP1P30533 357 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 MATKP42679 507 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 PSEN2P49810 448 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 YWHAZP63104 245 aaKnown RBP10.83□□□□□ -0.68
PABPC1-224ENST00000610907 TMEM62Q0P6H9 643 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 MAP2K5Q13163 448 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 PTK7Q13308 1070 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 SNX17Q15036 470 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 CA9Q16790 459 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 SLC25A52Q3SY17 297 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 RAB6CQ53S08 254 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 MORN1Q5T089 497 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 TTC39BQ5VTQ0 682 aaPredicted RBP10.83□□□□□ -0.68
PABPC1-224ENST00000610907 FAM47EQ6ZV65 393 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 LRRC6Q86X45 466 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 CHSY1Q86X52 802 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 ECHDC2Q86YB7 292 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 IGDCC3Q8IVU1 814 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 VPS52Q8N1B4 723 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 TCP10LQ8TDR4 215 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 KLHL29Q96CT2 875 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 MTBPQ96DY7 904 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 MRRFQ96E11 262 aaKnown RBP10.83□□□□□ -0.68
PABPC1-224ENST00000610907 QKIQ96PU8 341 aaKnown RBP eCLIP10.83□□□□□ -0.68
PABPC1-224ENST00000610907 HNRNPABQ99729 332 aaKnown RBP10.83□□□□□ -0.68
PABPC1-224ENST00000610907 FERMT1Q9BQL6 677 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 RAB6CQ9H0N0 254 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 XAB2Q9HCS7 855 aaKnown RBP10.83□□□□□ -0.68
PABPC1-224ENST00000610907 ARHGEF3Q9NR81 526 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 AP4E1Q9UPM8 1137 aa10.83□□□□□ -0.68
PABPC1-224ENST00000610907 PIN4Q9Y237 131 aaKnown RBP10.83□□□□□ -0.68
PABPC1-224ENST00000610907 PDCD11Q14690 1871 aaKnown RBP10.83□□□□□ -0.68
PABPC1-224ENST00000610907 ADCY6O43306 1168 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 LPXNO60711 386 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 HNRNPCL1O60812 293 aaKnown RBP10.82□□□□□ -0.68
PABPC1-224ENST00000610907 UNC5CO95185 931 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 TGDSO95455 350 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 SNRPAP09012 282 aaKnown RBP10.82□□□□□ -0.68
PABPC1-224ENST00000610907 DHRS4L1P0CG22 281 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 TROVE2P10155 538 aaKnown RBP eCLIP10.82□□□□□ -0.68
PABPC1-224ENST00000610907 FGFR1P11362 822 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 MLNP12872 115 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 FDFT1P37268 417 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 ARL4AP40617 200 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 MAGEA3P43357 314 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 MGAT5Q09328 741 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 KBTBD12Q3ZCT8 623 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 PPP6R3Q5H9R7 873 aaPredicted RBP10.82□□□□□ -0.68
PABPC1-224ENST00000610907 UBXN11Q5T124 520 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 SH2D5Q6ZV89 423 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 ASRGL1Q7L266 308 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 TLK2Q86UE8 772 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 CAND1Q86VP6 1230 aaKnown RBP10.82□□□□□ -0.68
PABPC1-224ENST00000610907 ZNF276Q8N554 614 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 C2orf69Q8N8R5 385 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 DNAJB3Q8WWF6 145 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 KCTD13Q8WZ19 329 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 APOPT1Q96IL0 206 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 RMDN2Q96LZ7 410 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 CSPG4P5Q96PW8 444 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 LRRC37BQ96QE4 947 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 DUSP16Q9BY84 665 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 B3GNT5Q9BYG0 378 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 CXCL16Q9H2A7 254 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 DPEP3Q9H4B8 488 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 DHX35Q9H5Z1 703 aaKnown RBP10.82□□□□□ -0.68
PABPC1-224ENST00000610907 ZNF408Q9H9D4 720 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 ETNK1Q9HBU6 452 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 POPDC2Q9HBU9 364 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 GPATCH2LQ9NWQ4 482 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 MKS1Q9NXB0 559 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 MTMR10Q9NXD2 777 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 ZC3H7BQ9UGR2 993 aaKnown RBP10.82□□□□□ -0.68
PABPC1-224ENST00000610907 GRID1Q9ULK0 1009 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 HES2Q9Y543 173 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 SF3B1O75533 1304 aaKnown RBP eCLIP10.82□□□□□ -0.686e-6■■■■■ 43.4
PABPC1-224ENST00000610907 UTRNP46939 3433 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 C2CD2LO14523 706 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 KLF11O14901 512 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 SPTLC1O15269 473 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 DAB1O75553 588 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 DGKIO75912 1065 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 C1QAP02745 245 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 APRTP07741 180 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 PDGFRBP09619 1106 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms