RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 GAB3Q8WWW8 586 aa20.15■□□□□ 0.82
CTSA-217ENST00000607482 BHMTQ93088 406 aa20.15■□□□□ 0.82
CTSA-217ENST00000607482 CNOT6LQ96LI5 555 aaKnown RBP20.15■□□□□ 0.82
CTSA-217ENST00000607482 NUP62CLQ9H1M0 184 aa20.15■□□□□ 0.82
CTSA-217ENST00000607482 CLSTN2Q9H4D0 955 aa20.15■□□□□ 0.82
CTSA-217ENST00000607482 UBE2TQ9NPD8 197 aaPredicted RBP20.15■□□□□ 0.82
CTSA-217ENST00000607482 OLA1Q9NTK5 396 aaKnown RBP20.15■□□□□ 0.82
CTSA-217ENST00000607482 BCCIPQ9P287 314 aaKnown RBP eCLIP20.15■□□□□ 0.82
CTSA-217ENST00000607482 FRYLO94915 3013 aa20.14■□□□□ 0.82
CTSA-217ENST00000607482 ATG2BQ96BY7 2078 aa20.14■□□□□ 0.81
CTSA-217ENST00000607482 SLC12A8A0AV02 714 aa20.14■□□□□ 0.81
CTSA-217ENST00000607482 O00370 1275 aa20.14■□□□□ 0.81
CTSA-217ENST00000607482 TULP3O75386 442 aa20.14■□□□□ 0.81
CTSA-217ENST00000607482 KLF8O95600 359 aaPredicted RBP20.14■□□□□ 0.81
CTSA-217ENST00000607482 TYRP14679 529 aa20.14■□□□□ 0.81
CTSA-217ENST00000607482 MARSP56192 900 aaKnown RBP20.14■□□□□ 0.81
CTSA-217ENST00000607482 SPEM2Q0P670 501 aa20.14■□□□□ 0.81
CTSA-217ENST00000607482 RAB41Q5JT25 222 aa20.14■□□□□ 0.81
CTSA-217ENST00000607482 EOGTQ5NDL2 527 aa20.14■□□□□ 0.81
CTSA-217ENST00000607482 C10orf76Q5T2E6 689 aa20.14■□□□□ 0.81
CTSA-217ENST00000607482 SDE2Q6IQ49 451 aa20.14■□□□□ 0.81
CTSA-217ENST00000607482 LCLAT1Q6UWP7 414 aa20.14■□□□□ 0.81
CTSA-217ENST00000607482 TRMT11Q7Z4G4 463 aaKnown RBP20.14■□□□□ 0.81
CTSA-217ENST00000607482 C12orf40Q86WS4 652 aa20.14■□□□□ 0.81
CTSA-217ENST00000607482 FAM114A1Q8IWE2 563 aa20.14■□□□□ 0.81
CTSA-217ENST00000607482 ZNF276Q8N554 614 aa20.14■□□□□ 0.81
CTSA-217ENST00000607482 ALLCQ8N6M5 410 aa20.14■□□□□ 0.81
CTSA-217ENST00000607482 EZH1Q92800 747 aaPredicted RBP20.14■□□□□ 0.81
CTSA-217ENST00000607482 WBP2Q969T9 261 aa20.14■□□□□ 0.81
CTSA-217ENST00000607482 FAM81BQ96LP2 452 aa20.14■□□□□ 0.81
CTSA-217ENST00000607482 POLMQ9NP87 494 aaPredicted RBP20.14■□□□□ 0.81
CTSA-217ENST00000607482 TULP2O00295 520 aa20.13■□□□□ 0.81
CTSA-217ENST00000607482 CYBBP04839 570 aa20.13■□□□□ 0.81
CTSA-217ENST00000607482 BRD2P25440 801 aaKnown RBP20.13■□□□□ 0.81
CTSA-217ENST00000607482 GBP1P32455 592 aa20.13■□□□□ 0.81
CTSA-217ENST00000607482 CHKAP35790 457 aa20.13■□□□□ 0.81
CTSA-217ENST00000607482 USP8P40818 1118 aa20.13■□□□□ 0.81
CTSA-217ENST00000607482 HARS2P49590 506 aaKnown RBP20.13■□□□□ 0.81
CTSA-217ENST00000607482 RGS7P49802 495 aa20.13■□□□□ 0.81
CTSA-217ENST00000607482 MFAP3P55082 362 aa20.13■□□□□ 0.81
CTSA-217ENST00000607482 CNGA2Q16280 664 aa20.13■□□□□ 0.81
CTSA-217ENST00000607482 GAB4Q2WGN9 574 aa20.13■□□□□ 0.81
CTSA-217ENST00000607482 HSF5Q4G112 596 aaPredicted RBP20.13■□□□□ 0.81
CTSA-217ENST00000607482 USP39Q53GS9 565 aaKnown RBP20.13■□□□□ 0.81
CTSA-217ENST00000607482 ANO7Q6IWH7 933 aa20.13■□□□□ 0.81
CTSA-217ENST00000607482 ARHGEF19Q8IW93 802 aa20.13■□□□□ 0.81
CTSA-217ENST00000607482 PGBD3Q8N328 593 aa20.13■□□□□ 0.81
CTSA-217ENST00000607482 FAM160A2Q8N612 972 aaPredicted RBP20.13■□□□□ 0.81
CTSA-217ENST00000607482 TXNDC5Q8NBS9 432 aaKnown RBP20.13■□□□□ 0.81
CTSA-217ENST00000607482 KAT5Q92993 513 aa20.13■□□□□ 0.81
CTSA-217ENST00000607482 GBP4Q96PP9 640 aa20.13■□□□□ 0.81
CTSA-217ENST00000607482 CRACR2AQ9BSW2 395 aa20.13■□□□□ 0.81
CTSA-217ENST00000607482 MMP17Q9ULZ9 603 aa20.13■□□□□ 0.81
CTSA-217ENST00000607482 PES1O00541 588 aaKnown RBP20.12■□□□□ 0.81
CTSA-217ENST00000607482 MED7O43513 233 aa20.12■□□□□ 0.81
CTSA-217ENST00000607482 STC2O76061 302 aa20.12■□□□□ 0.81
CTSA-217ENST00000607482 SDHBP21912 280 aa20.12■□□□□ 0.81
CTSA-217ENST00000607482 CORO1AP31146 461 aaKnown RBP20.12■□□□□ 0.81
CTSA-217ENST00000607482 HOXC13P31276 330 aa20.12■□□□□ 0.81
CTSA-217ENST00000607482 LMNB2Q03252 620 aa20.12■□□□□ 0.81
CTSA-217ENST00000607482 ELF2Q15723 593 aa20.12■□□□□ 0.81
CTSA-217ENST00000607482 PM20D1Q6GTS8 502 aa20.12■□□□□ 0.81
CTSA-217ENST00000607482 GBP6Q6ZN66 633 aa20.12■□□□□ 0.81
CTSA-217ENST00000607482 ENOSF1Q7L5Y1 443 aa20.12■□□□□ 0.81
CTSA-217ENST00000607482 DENND1CQ8IV53 801 aa20.12■□□□□ 0.81
CTSA-217ENST00000607482 KCTD13Q8WZ19 329 aa20.12■□□□□ 0.81
CTSA-217ENST00000607482 TFAP2BQ92481 460 aa20.12■□□□□ 0.81
CTSA-217ENST00000607482 NDRG1Q92597 394 aaKnown RBP20.12■□□□□ 0.81
CTSA-217ENST00000607482 EDEM1Q92611 657 aa20.12■□□□□ 0.81
CTSA-217ENST00000607482 CNGB3Q9NQW8 809 aa20.12■□□□□ 0.81
CTSA-217ENST00000607482 ST7Q9NRC1 585 aa20.12■□□□□ 0.81
CTSA-217ENST00000607482 ABCC13Q9NSE7 274 aa20.12■□□□□ 0.81
CTSA-217ENST00000607482 GVINP1Q7Z2Y8 2422 aa20.12■□□□□ 0.81
CTSA-217ENST00000607482 GOLGA6L22H0YM25 854 aa20.11■□□□□ 0.81
CTSA-217ENST00000607482 PIK3R2O00459 728 aa20.11■□□□□ 0.81
CTSA-217ENST00000607482 DGKGP49619 791 aa20.11■□□□□ 0.81
CTSA-217ENST00000607482 CRY1Q16526 586 aa20.11■□□□□ 0.81
CTSA-217ENST00000607482 EMC10Q5UCC4 262 aa20.11■□□□□ 0.81
CTSA-217ENST00000607482 BSPRYQ5W0U4 402 aa20.11■□□□□ 0.81
CTSA-217ENST00000607482 FMNL3Q8IVF7 1028 aa20.11■□□□□ 0.81
CTSA-217ENST00000607482 UBR7Q8N806 425 aa20.11■□□□□ 0.81
CTSA-217ENST00000607482 ZNF513Q8N8E2 541 aaPredicted RBP20.11■□□□□ 0.81
CTSA-217ENST00000607482 LMO3Q8TAP4 145 aa20.11■□□□□ 0.81
CTSA-217ENST00000607482 EBF1Q9UH73 591 aa20.11■□□□□ 0.81
CTSA-217ENST00000607482 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.11■□□□□ 0.81
CTSA-217ENST00000607482 PRR5-ARHGAP8B1AHC4 643 aa20.1■□□□□ 0.81
CTSA-217ENST00000607482 RNF225M0QZC1 329 aaPredicted RBP20.1■□□□□ 0.81
CTSA-217ENST00000607482 RHOBTB1O94844 696 aa20.1■□□□□ 0.81
CTSA-217ENST00000607482 ARHGAP8P85298 464 aa20.1■□□□□ 0.81
CTSA-217ENST00000607482 EXOC3L4Q17RC7 722 aa20.1■□□□□ 0.81
CTSA-217ENST00000607482 KBTBD6Q86V97 674 aa20.1■□□□□ 0.81
CTSA-217ENST00000607482 SFTPA1Q8IWL2 248 aa20.1■□□□□ 0.81
CTSA-217ENST00000607482 ETFBKMTQ8IXQ9 262 aa20.1■□□□□ 0.81
CTSA-217ENST00000607482 TERB1Q8NA31 727 aa20.1■□□□□ 0.81
CTSA-217ENST00000607482 IL17RCQ8NAC3 791 aa20.1■□□□□ 0.81
CTSA-217ENST00000607482 KCNV2Q8TDN2 545 aa20.1■□□□□ 0.81
CTSA-217ENST00000607482 DDI1Q8WTU0 396 aa20.1■□□□□ 0.81
CTSA-217ENST00000607482 PLD4Q96BZ4 506 aa20.1■□□□□ 0.81
CTSA-217ENST00000607482 TPSD1Q9BZJ3 242 aa20.1■□□□□ 0.81
CTSA-217ENST00000607482 MIS12Q9H081 205 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms