RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 ADH5P11766 374 aa17.35■□□□□ 0.37
LINC00240-203ENST00000606878 KRT9P35527 623 aa17.35■□□□□ 0.37
LINC00240-203ENST00000606878 NBL1P41271 181 aa17.35■□□□□ 0.37
LINC00240-203ENST00000606878 DAOAP59103 153 aa17.35■□□□□ 0.37
LINC00240-203ENST00000606878 RAPGEF1Q13905 1077 aa17.35■□□□□ 0.37
LINC00240-203ENST00000606878 DRAP1Q14919 205 aaPredicted RBP17.35■□□□□ 0.37
LINC00240-203ENST00000606878 SCUBE3Q8IX30 993 aa17.35■□□□□ 0.37
LINC00240-203ENST00000606878 FAM71AQ8IYT1 594 aa17.35■□□□□ 0.37
LINC00240-203ENST00000606878 LSM14BQ9BX40 385 aaKnown RBP17.35■□□□□ 0.37
LINC00240-203ENST00000606878 MIS12Q9H081 205 aa17.35■□□□□ 0.37
LINC00240-203ENST00000606878 SPHK2Q9NRA0 654 aa17.35■□□□□ 0.37
LINC00240-203ENST00000606878 LIMA1Q9UHB6 759 aaKnown RBP17.35■□□□□ 0.37
LINC00240-203ENST00000606878 PTPRZ1P23471 2315 aaPredicted RBP17.35■□□□□ 0.37
LINC00240-203ENST00000606878 SLC12A8A0AV02 714 aa17.34■□□□□ 0.37
LINC00240-203ENST00000606878 SMTNL1A8MU46 457 aa17.34■□□□□ 0.37
LINC00240-203ENST00000606878 SART1O43290 800 aaKnown RBP17.34■□□□□ 0.37
LINC00240-203ENST00000606878 GREM1O60565 184 aa17.34■□□□□ 0.37
LINC00240-203ENST00000606878 STC2O76061 302 aa17.34■□□□□ 0.37
LINC00240-203ENST00000606878 UCHL3P15374 230 aa17.34■□□□□ 0.37
LINC00240-203ENST00000606878 CLCN1P35523 988 aa17.34■□□□□ 0.37
LINC00240-203ENST00000606878 OPRD1P41143 372 aa17.34■□□□□ 0.37
LINC00240-203ENST00000606878 RPL34P49207 117 aaKnown RBP17.34■□□□□ 0.37
LINC00240-203ENST00000606878 COPB1P53618 953 aaKnown RBP17.34■□□□□ 0.37
LINC00240-203ENST00000606878 GAS6Q14393 721 aa17.34■□□□□ 0.37
LINC00240-203ENST00000606878 KLHL40Q2TBA0 621 aa17.34■□□□□ 0.37
LINC00240-203ENST00000606878 ANO4Q32M45 955 aa17.34■□□□□ 0.37
LINC00240-203ENST00000606878 ANO6Q4KMQ2 910 aa17.34■□□□□ 0.37
LINC00240-203ENST00000606878 NAIF1Q69YI7 327 aaPredicted RBP17.34■□□□□ 0.37
LINC00240-203ENST00000606878 ZC3H14Q6PJT7 736 aaKnown RBP17.34■□□□□ 0.37
LINC00240-203ENST00000606878 Q6ZS52 159 aa17.34■□□□□ 0.37
LINC00240-203ENST00000606878 BHLHA9Q7RTU4 235 aa17.34■□□□□ 0.37
LINC00240-203ENST00000606878 TMEM25Q86YD3 366 aa17.34■□□□□ 0.37
LINC00240-203ENST00000606878 EDEM1Q92611 657 aa17.34■□□□□ 0.37
LINC00240-203ENST00000606878 PNKPQ96T60 521 aa17.34■□□□□ 0.37
LINC00240-203ENST00000606878 SLC4A5Q9BY07 1137 aa17.34■□□□□ 0.37
LINC00240-203ENST00000606878 FAM126AQ9BYI3 521 aaPredicted RBP17.34■□□□□ 0.37
LINC00240-203ENST00000606878 STK33Q9BYT3 514 aa17.34■□□□□ 0.37
LINC00240-203ENST00000606878 PLCB1Q9NQ66 1216 aa17.34■□□□□ 0.37
LINC00240-203ENST00000606878 WDR35Q9P2L0 1181 aa17.34■□□□□ 0.37
LINC00240-203ENST00000606878 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.33■□□□□ 0.36
LINC00240-203ENST00000606878 PROB1E7EW31 1015 aa17.33■□□□□ 0.36
LINC00240-203ENST00000606878 HMBSP08397 361 aa17.33■□□□□ 0.36
LINC00240-203ENST00000606878 SLC6A11P48066 632 aa17.33■□□□□ 0.36
LINC00240-203ENST00000606878 NRLP54845 237 aa17.33■□□□□ 0.36
LINC00240-203ENST00000606878 SNX16P57768 344 aa17.33■□□□□ 0.36
LINC00240-203ENST00000606878 NCAPHQ15003 741 aa17.33■□□□□ 0.36
LINC00240-203ENST00000606878 GAB4Q2WGN9 574 aa17.33■□□□□ 0.36
LINC00240-203ENST00000606878 PREPLQ4J6C6 727 aaPredicted RBP17.33■□□□□ 0.36
LINC00240-203ENST00000606878 TSSK4Q6SA08 328 aa17.33■□□□□ 0.36
LINC00240-203ENST00000606878 TMEM110Q86TL2 294 aa17.33■□□□□ 0.36
LINC00240-203ENST00000606878 ATRIPQ8WXE1 791 aa17.33■□□□□ 0.36
LINC00240-203ENST00000606878 NOX5Q96PH1 765 aa17.33■□□□□ 0.36
LINC00240-203ENST00000606878 PHOX2BQ99453 314 aa17.33■□□□□ 0.36
LINC00240-203ENST00000606878 BPIFA3Q9BQP9 254 aa17.33■□□□□ 0.36
LINC00240-203ENST00000606878 NAA15Q9BXJ9 866 aaKnown RBP17.33■□□□□ 0.36
LINC00240-203ENST00000606878 LHX5Q9H2C1 402 aa17.33■□□□□ 0.36
LINC00240-203ENST00000606878 PDCL3Q9H2J4 239 aa17.33■□□□□ 0.36
LINC00240-203ENST00000606878 SEMA4AQ9H3S1 761 aa17.33■□□□□ 0.36
LINC00240-203ENST00000606878 PRMT8Q9NR22 394 aaPredicted RBP17.33■□□□□ 0.36
LINC00240-203ENST00000606878 AJAP1Q9UKB5 411 aaPredicted RBP17.33■□□□□ 0.36
LINC00240-203ENST00000606878 PCDHGC3Q9UN70 934 aa17.33■□□□□ 0.36
LINC00240-203ENST00000606878 HBS1LQ9Y450 684 aaKnown RBP17.33■□□□□ 0.36
LINC00240-203ENST00000606878 FHOD1Q9Y613 1164 aa17.33■□□□□ 0.36
LINC00240-203ENST00000606878 RIF1Q5UIP0 2472 aaKnown RBP17.33■□□□□ 0.36
LINC00240-203ENST00000606878 MIA3Q5JRA6 1907 aa17.32■□□□□ 0.36
LINC00240-203ENST00000606878 HOXC11O43248 304 aaPredicted RBP17.32■□□□□ 0.36
LINC00240-203ENST00000606878 RNF40O75150 1001 aa17.32■□□□□ 0.36
LINC00240-203ENST00000606878 LTFP02788 710 aa17.32■□□□□ 0.36
LINC00240-203ENST00000606878 KLKB1P03952 638 aa17.32■□□□□ 0.36
LINC00240-203ENST00000606878 ZNF18P17022 549 aa17.32■□□□□ 0.36
LINC00240-203ENST00000606878 CHKAP35790 457 aa17.32■□□□□ 0.36
LINC00240-203ENST00000606878 EIF2DP41214 584 aaKnown RBP17.32■□□□□ 0.36
LINC00240-203ENST00000606878 HARS2P49590 506 aaKnown RBP17.32■□□□□ 0.36
LINC00240-203ENST00000606878 Q6ZNB5 142 aa17.32■□□□□ 0.36
LINC00240-203ENST00000606878 NUDT18Q6ZVK8 323 aa17.32■□□□□ 0.36
LINC00240-203ENST00000606878 ALYREFQ86V81 257 aaKnown RBP17.32■□□□□ 0.36
LINC00240-203ENST00000606878 SLC47A2Q86VL8 602 aa17.32■□□□□ 0.36
LINC00240-203ENST00000606878 FMNL3Q8IVF7 1028 aa17.32■□□□□ 0.36
LINC00240-203ENST00000606878 AOPEPQ8N6M6 819 aa17.32■□□□□ 0.36
LINC00240-203ENST00000606878 PCMTD1Q96MG8 357 aaPredicted RBP17.32■□□□□ 0.36
LINC00240-203ENST00000606878 XPO6Q96QU8 1125 aaKnown RBP17.32■□□□□ 0.36
LINC00240-203ENST00000606878 ZSCAN32Q9NX65 697 aa17.32■□□□□ 0.36
LINC00240-203ENST00000606878 DEC1Q9P2X7 70 aa17.32■□□□□ 0.36
LINC00240-203ENST00000606878 SFMBT1Q9UHJ3 866 aa17.32■□□□□ 0.36
LINC00240-203ENST00000606878 WDFY4Q6ZS81 3184 aa17.32■□□□□ 0.36
LINC00240-203ENST00000606878 COL4A2P08572 1712 aa17.32■□□□□ 0.36
LINC00240-203ENST00000606878 A0A0A0MRY4 1105 aa17.31■□□□□ 0.36
LINC00240-203ENST00000606878 CHURC1-FNTBB4DL54 471 aa17.31■□□□□ 0.36
LINC00240-203ENST00000606878 APODP05090 189 aa17.31■□□□□ 0.36
LINC00240-203ENST00000606878 CORO1AP31146 461 aaKnown RBP17.31■□□□□ 0.36
LINC00240-203ENST00000606878 GRIA2P42262 883 aa17.31■□□□□ 0.36
LINC00240-203ENST00000606878 ZNF165P49910 485 aa17.31■□□□□ 0.36
LINC00240-203ENST00000606878 MRE11P49959 708 aa17.31■□□□□ 0.36
LINC00240-203ENST00000606878 SATB1Q01826 763 aa17.31■□□□□ 0.36
LINC00240-203ENST00000606878 UBXN1Q04323 297 aa17.31■□□□□ 0.36
LINC00240-203ENST00000606878 TRIP4Q15650 581 aaPredicted RBP17.31■□□□□ 0.36
LINC00240-203ENST00000606878 TPGS1Q6ZTW0 290 aa17.31■□□□□ 0.36
LINC00240-203ENST00000606878 DENND1CQ8IV53 801 aa17.31■□□□□ 0.36
LINC00240-203ENST00000606878 WDTC1Q8N5D0 677 aa17.31■□□□□ 0.36
LINC00240-203ENST00000606878 NAT16Q8N8M0 369 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms