RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 APODP05090 189 aa14.06□□□□□ -0.16
CTSA-213ENST00000606782 ZNF806P0C7X5 589 aa14.06□□□□□ -0.16
CTSA-213ENST00000606782 ADORA2BP29275 332 aa14.06□□□□□ -0.16
CTSA-213ENST00000606782 ATP5C1P36542 298 aaKnown RBP14.06□□□□□ -0.16
CTSA-213ENST00000606782 PSEN1P49768 467 aa14.06□□□□□ -0.16
CTSA-213ENST00000606782 MXI1P50539 228 aa14.06□□□□□ -0.16
CTSA-213ENST00000606782 KCNH2Q12809 1159 aa14.06□□□□□ -0.16
CTSA-213ENST00000606782 KCNJ12Q14500 433 aa14.06□□□□□ -0.16
CTSA-213ENST00000606782 CRY1Q16526 586 aa14.06□□□□□ -0.16
CTSA-213ENST00000606782 C2orf27AQ580R0 203 aa14.06□□□□□ -0.16
CTSA-213ENST00000606782 PPP1R26Q5T8A7 1209 aaPredicted RBP14.06□□□□□ -0.16
CTSA-213ENST00000606782 CCDC186Q7Z3E2 898 aa14.06□□□□□ -0.16
CTSA-213ENST00000606782 LUZP1Q86V48 1076 aa14.06□□□□□ -0.16
CTSA-213ENST00000606782 GAS2L3Q86XJ1 694 aa14.06□□□□□ -0.16
CTSA-213ENST00000606782 BBS7Q8IWZ6 715 aa14.06□□□□□ -0.16
CTSA-213ENST00000606782 DUSP15Q9H1R2 295 aaPredicted RBP14.06□□□□□ -0.16
CTSA-213ENST00000606782 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.06□□□□□ -0.16
CTSA-213ENST00000606782 SPHK2Q9NRA0 654 aa14.06□□□□□ -0.16
CTSA-213ENST00000606782 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.06□□□□□ -0.16
CTSA-213ENST00000606782 LIMA1Q9UHB6 759 aaKnown RBP14.06□□□□□ -0.16
CTSA-213ENST00000606782 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.06□□□□□ -0.16
CTSA-213ENST00000606782 ABCA7Q8IZY2 2146 aa14.06□□□□□ -0.16
CTSA-213ENST00000606782 SCAMP3O14828 347 aaKnown RBP14.05□□□□□ -0.16
CTSA-213ENST00000606782 TBX18O95935 607 aa14.05□□□□□ -0.16
CTSA-213ENST00000606782 CD58P19256 250 aa14.05□□□□□ -0.16
CTSA-213ENST00000606782 CDK11BP21127 795 aaKnown RBP14.05□□□□□ -0.16
CTSA-213ENST00000606782 ACO1P21399 889 aaKnown RBP14.05□□□□□ -0.16
CTSA-213ENST00000606782 MTIF2P46199 727 aaKnown RBP14.05□□□□□ -0.16
CTSA-213ENST00000606782 DGKEP52429 567 aa14.05□□□□□ -0.16
CTSA-213ENST00000606782 LIMK1P53667 647 aa14.05□□□□□ -0.16
CTSA-213ENST00000606782 RAD23BP54727 409 aa14.05□□□□□ -0.16
CTSA-213ENST00000606782 PREPLQ4J6C6 727 aaPredicted RBP14.05□□□□□ -0.16
CTSA-213ENST00000606782 HSP90AA4PQ58FG1 418 aa14.05□□□□□ -0.16
CTSA-213ENST00000606782 ARHGAP17Q68EM7 881 aa14.05□□□□□ -0.16
CTSA-213ENST00000606782 APTXQ7Z2E3 356 aaKnown RBP14.05□□□□□ -0.16
CTSA-213ENST00000606782 SCD5Q86SK9 330 aa14.05□□□□□ -0.16
CTSA-213ENST00000606782 CREBRFQ8IUR6 639 aa14.05□□□□□ -0.16
CTSA-213ENST00000606782 SFTPA1Q8IWL2 248 aa14.05□□□□□ -0.16
CTSA-213ENST00000606782 IL17RCQ8NAC3 791 aa14.05□□□□□ -0.16
CTSA-213ENST00000606782 TSTD1Q8NFU3 115 aa14.05□□□□□ -0.16
CTSA-213ENST00000606782 OLIG1Q8TAK6 271 aa14.05□□□□□ -0.16
CTSA-213ENST00000606782 TUBGCP2Q9BSJ2 902 aa14.05□□□□□ -0.16
CTSA-213ENST00000606782 MMRN2Q9H8L6 949 aa14.05□□□□□ -0.16
CTSA-213ENST00000606782 NMUR1Q9HB89 426 aa14.05□□□□□ -0.16
CTSA-213ENST00000606782 ARHGEF4Q9NR80 690 aa14.05□□□□□ -0.16
CTSA-213ENST00000606782 CISHQ9NSE2 258 aa14.05□□□□□ -0.16
CTSA-213ENST00000606782 CLIC5Q9NZA1 410 aa14.05□□□□□ -0.16
CTSA-213ENST00000606782 P4HA2O15460 535 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 CYP26A1O43174 497 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 TULP3O75386 442 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 RHOBTB1O94844 696 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 ATP1A3P13637 1013 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 PRKCSHP14314 528 aaPredicted RBP14.04□□□□□ -0.16
CTSA-213ENST00000606782 HNRNPLP14866 589 aaKnown RBP eCLIP14.04□□□□□ -0.16
CTSA-213ENST00000606782 PLA2G4AP47712 749 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 FMO5P49326 533 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 SEC13P55735 322 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 KRT31Q15323 416 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 MAN2A1Q16706 1144 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 CBWD6Q4V339 395 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 VWA3BQ502W6 1294 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 DCAF17Q5H9S7 520 aaPredicted RBP14.04□□□□□ -0.16
CTSA-213ENST00000606782 CBWD3Q5JTY5 395 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 MIIPQ5JXC2 388 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 CBWD5Q5RIA9 395 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 TCERG1LQ5VWI1 586 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 TMEM92Q6UXU6 159 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 C11orf74Q86VG3 221 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 TMEM25Q86YD3 366 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 SLC4A11Q8NBS3 891 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 TATDN2Q93075 761 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 TMEM176AQ96HP8 235 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 HEXIM2Q96MH2 286 aaKnown RBP14.04□□□□□ -0.16
CTSA-213ENST00000606782 NACA2Q9H009 215 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 ARRDC1-AS1Q9H2J1 176 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 MARK1Q9P0L2 795 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 DEC1Q9P2X7 70 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 DNMT3LQ9UJW3 386 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 STARD13Q9Y3M8 1113 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 ACACBO00763 2458 aa14.04□□□□□ -0.16
CTSA-213ENST00000606782 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.03□□□□□ -0.16
CTSA-213ENST00000606782 A0A1W2PQH9 124 aa14.03□□□□□ -0.16
CTSA-213ENST00000606782 SGK1O00141 431 aa14.03□□□□□ -0.16
CTSA-213ENST00000606782 CACNG3O60359 315 aa14.03□□□□□ -0.16
CTSA-213ENST00000606782 GDF9O60383 454 aa14.03□□□□□ -0.16
CTSA-213ENST00000606782 AFPP02771 609 aaKnown RBP14.03□□□□□ -0.16
CTSA-213ENST00000606782 RARGP13631 454 aa14.03□□□□□ -0.16
CTSA-213ENST00000606782 ELF2Q15723 593 aa14.03□□□□□ -0.16
CTSA-213ENST00000606782 USP39Q53GS9 565 aaKnown RBP14.03□□□□□ -0.16
CTSA-213ENST00000606782 RAB41Q5JT25 222 aa14.03□□□□□ -0.16
CTSA-213ENST00000606782 EOGTQ5NDL2 527 aa14.03□□□□□ -0.16
CTSA-213ENST00000606782 BTBD8Q5XKL5 378 aa14.03□□□□□ -0.16
CTSA-213ENST00000606782 Q6ZNB5 142 aa14.03□□□□□ -0.16
CTSA-213ENST00000606782 CCDC33Q8N5R6 958 aa14.03□□□□□ -0.16
CTSA-213ENST00000606782 ALLCQ8N6M5 410 aa14.03□□□□□ -0.16
CTSA-213ENST00000606782 ANKRD52Q8NB46 1076 aa14.03□□□□□ -0.16
CTSA-213ENST00000606782 TXNDC5Q8NBS9 432 aaKnown RBP14.03□□□□□ -0.16
CTSA-213ENST00000606782 CDK5RAP1Q96SZ6 601 aaKnown RBP14.03□□□□□ -0.16
CTSA-213ENST00000606782 ARID3AQ99856 593 aa14.03□□□□□ -0.16
CTSA-213ENST00000606782 RBSNQ9H1K0 784 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms