RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 NELL1Q92832 810 aa12.1□□□□□ -0.47
CCDC12-209ENST00000604164 PLD4Q96BZ4 506 aa12.1□□□□□ -0.47
CCDC12-209ENST00000604164 NOX5Q96PH1 765 aa12.1□□□□□ -0.47
CCDC12-209ENST00000604164 PHOX2BQ99453 314 aa12.1□□□□□ -0.47
CCDC12-209ENST00000604164 DEC1Q9P2X7 70 aa12.1□□□□□ -0.47
CCDC12-209ENST00000604164 HBS1LQ9Y450 684 aaKnown RBP12.1□□□□□ -0.47
CCDC12-209ENST00000604164 DAAM1Q9Y4D1 1078 aa12.1□□□□□ -0.47
CCDC12-209ENST00000604164 MYO16Q9Y6X6 1858 aa12.1□□□□□ -0.47
CCDC12-209ENST00000604164 CCDC163A0A0D9SF12 145 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 SLC12A8A0AV02 714 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 PRR23AA6NEV1 266 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 TULP2O00295 520 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 RNF40O75150 1001 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 STC2O76061 302 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 CYBBP04839 570 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 KRT9P35527 623 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 OPRD1P41143 372 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 TNFRSF4P43489 277 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 DAOAP59103 153 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 ZNF445P59923 1031 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 MRPS21P82921 87 aaKnown RBP12.09□□□□□ -0.47
CCDC12-209ENST00000604164 SATB1Q01826 763 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 MYL5Q02045 173 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 GAS6Q14393 721 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 HSP90AA4PQ58FG1 418 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 MIIPQ5JXC2 388 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 PMF1Q6P1K2 205 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 SYT13Q7L8C5 426 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 TRMT11Q7Z4G4 463 aaKnown RBP12.09□□□□□ -0.47
CCDC12-209ENST00000604164 LONP2Q86WA8 852 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 CAMKK1Q8N5S9 505 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 BBS2Q9BXC9 721 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 ARHGEF4Q9NR80 690 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 ST7Q9NRC1 585 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 SAMSN1Q9NSI8 373 aaKnown RBP12.09□□□□□ -0.47
CCDC12-209ENST00000604164 MARK1Q9P0L2 795 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 DNAJC12Q9UKB3 198 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 NUDT5Q9UKK9 219 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 RAB23Q9ULC3 237 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 R4GN57 208 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 CACNA1HO95180 2353 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 WDFY4Q6ZS81 3184 aa12.09□□□□□ -0.47
CCDC12-209ENST00000604164 A0A0A0MRY4 1105 aa12.08□□□□□ -0.48
CCDC12-209ENST00000604164 YJEFN3A6XGL0 299 aa12.08□□□□□ -0.48
CCDC12-209ENST00000604164 E7ENQ6 273 aa12.08□□□□□ -0.48
CCDC12-209ENST00000604164 SCAMP3O14828 347 aaKnown RBP12.08□□□□□ -0.48
CCDC12-209ENST00000604164 MDM4O15151 490 aa12.08□□□□□ -0.48
CCDC12-209ENST00000604164 GREM1O60565 184 aa12.08□□□□□ -0.48
CCDC12-209ENST00000604164 LILRB5O75023 590 aa12.08□□□□□ -0.48
CCDC12-209ENST00000604164 KAT7O95251 611 aa12.08□□□□□ -0.48
CCDC12-209ENST00000604164 LATS1O95835 1130 aa12.08□□□□□ -0.48
CCDC12-209ENST00000604164 LTFP02788 710 aa12.08□□□□□ -0.48
CCDC12-209ENST00000604164 CORO1AP31146 461 aaKnown RBP12.08□□□□□ -0.48
CCDC12-209ENST00000604164 GPD2P43304 727 aa12.08□□□□□ -0.48
CCDC12-209ENST00000604164 RPL34P49207 117 aaKnown RBP12.08□□□□□ -0.48
CCDC12-209ENST00000604164 RGS7P49802 495 aa12.08□□□□□ -0.48
CCDC12-209ENST00000604164 CDKAL1Q5VV42 579 aa12.08□□□□□ -0.48
CCDC12-209ENST00000604164 GJB7Q6PEY0 223 aa12.08□□□□□ -0.48
CCDC12-209ENST00000604164 TSSK4Q6SA08 328 aa12.08□□□□□ -0.48
CCDC12-209ENST00000604164 Q6ZNB5 142 aa12.08□□□□□ -0.48
CCDC12-209ENST00000604164 BEND5Q7L4P6 421 aa12.08□□□□□ -0.48
CCDC12-209ENST00000604164 TMEM25Q86YD3 366 aa12.08□□□□□ -0.48
CCDC12-209ENST00000604164 RPLP0P6Q8NHW5 317 aa12.08□□□□□ -0.48
CCDC12-209ENST00000604164 ZSWIM1Q9BR11 485 aa12.08□□□□□ -0.48
CCDC12-209ENST00000604164 LHX5Q9H2C1 402 aa12.08□□□□□ -0.48
CCDC12-209ENST00000604164 FBRSL1Q9HCM7 1045 aaKnown RBP12.08□□□□□ -0.48
CCDC12-209ENST00000604164 PCDHGC3Q9UN70 934 aa12.08□□□□□ -0.48
CCDC12-209ENST00000604164 TBC1D3BA6NDS4 549 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 BECN2A8MW95 431 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 NEDD8-MDP1E9PL57 170 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 K7ESF4 209 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 CACNG3O60359 315 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 HMBSP08397 361 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 TDGF1P13385 188 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 TYRP14679 529 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 CDK11BP21127 795 aaKnown RBP12.07□□□□□ -0.48
CCDC12-209ENST00000604164 RAPGEF1Q13905 1077 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 TRIP4Q15650 581 aaPredicted RBP12.07□□□□□ -0.48
CCDC12-209ENST00000604164 GAB4Q2WGN9 574 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 KLHDC7AQ5VTJ3 777 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 NUGGCQ68CJ6 796 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 GRAMD4Q6IC98 578 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 MSANTD2Q6P1R3 559 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 BHLHA9Q7RTU4 235 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 ASCL5Q7RTU5 278 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 TMEM110Q86TL2 294 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 WDR5BQ86VZ2 330 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 FMNL3Q8IVF7 1028 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 UNC45BQ8IWX7 931 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 ETFBKMTQ8IXQ9 262 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 FAM71AQ8IYT1 594 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 CPXM2Q8N436 756 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 USP33Q8TEY7 942 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 EDEM1Q92611 657 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 FAM149B1Q96BN6 582 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 DDX50Q9BQ39 737 aaKnown RBP12.07□□□□□ -0.48
CCDC12-209ENST00000604164 SLC4A5Q9BY07 1137 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 IRX2Q9BZI1 471 aaPredicted RBP12.07□□□□□ -0.48
CCDC12-209ENST00000604164 MIS12Q9H081 205 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 EPC1Q9H2F5 836 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms