RNA–Protein interactions for RNA: ENST00000602492.5

PPFIA3-204, Transcript of PTPRF interacting protein alpha 3, human

TSL 4

Gene PPFIA3, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA3-204	ENST00000602492	HLA-DRA	P01903	254 aa		21.32	■■□□□ 1
PPFIA3-204	ENST00000602492	GFPT1	Q06210	699 aa	Predicted RBP	21.32	■■□□□ 1
PPFIA3-204	ENST00000602492	CEP135	Q66GS9	1140 aa		21.32	■■□□□ 1
PPFIA3-204	ENST00000602492	TPGS1	Q6ZTW0	290 aa		21.32	■■□□□ 1
PPFIA3-204	ENST00000602492	GPRIN1	Q7Z2K8	1008 aa		21.32	■■□□□ 1
PPFIA3-204	ENST00000602492	RABEPK	Q7Z6M1	372 aa		21.32	■■□□□ 1
PPFIA3-204	ENST00000602492	DEFB119	Q8N690	84 aa		21.32	■■□□□ 1
PPFIA3-204	ENST00000602492	JAKMIP2	Q96AA8	810 aa		21.32	■■□□□ 1
PPFIA3-204	ENST00000602492	HNRNPAB	Q99729	332 aa	Known RBP	21.32	■■□□□ 1
PPFIA3-204	ENST00000602492	ADAM33	Q9BZ11	813 aa		21.32	■■□□□ 1
PPFIA3-204	ENST00000602492	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	21.32	■■□□□ 1
PPFIA3-204	ENST00000602492	MARK1	Q9P0L2	795 aa		21.32	■■□□□ 1
PPFIA3-204	ENST00000602492	FRMD4B	Q9Y2L6	1034 aa		21.32	■■□□□ 1
PPFIA3-204	ENST00000602492	ASPM	Q8IZT6	3477 aa		21.31	■■□□□ 1
PPFIA3-204	ENST00000602492	ZNF217	O75362	1048 aa		21.31	■■□□□ 1
PPFIA3-204	ENST00000602492	CLEC20A	Q6ZU45	233 aa		21.31	■■□□□ 1
PPFIA3-204	ENST00000602492	IPO4	Q8TEX9	1081 aa	Known RBP	21.31	■■□□□ 1
PPFIA3-204	ENST00000602492	ACOX2	Q99424	681 aa		21.31	■■□□□ 1
PPFIA3-204	ENST00000602492	IMPG2	Q9BZV3	1241 aa		21.31	■■□□□ 1
PPFIA3-204	ENST00000602492	OSER1	Q9NX31	292 aa		21.31	■■□□□ 1
PPFIA3-204	ENST00000602492	PCDHA5	Q9Y5H7	936 aa		21.31	■■□□□ 1
PPFIA3-204	ENST00000602492	IGHV1OR15-9	A0A0B4J2B8	117 aa		21.3	■■□□□ 1
PPFIA3-204	ENST00000602492	TOP3B	O95985	862 aa	Known RBP	21.3	■■□□□ 1
PPFIA3-204	ENST00000602492	SERPINF2	P08697	491 aa		21.3	■■□□□ 1
PPFIA3-204	ENST00000602492	NDUFV2	P19404	249 aa		21.3	■■□□□ 1
PPFIA3-204	ENST00000602492	ACO1	P21399	889 aa	Known RBP	21.3	■■□□□ 1
PPFIA3-204	ENST00000602492	ZNF33A	Q06730	810 aa		21.3	■■□□□ 1
PPFIA3-204	ENST00000602492	INCA1	Q0VD86	236 aa		21.3	■■□□□ 1
PPFIA3-204	ENST00000602492	KLHDC10	Q6PID8	442 aa		21.3	■■□□□ 1
PPFIA3-204	ENST00000602492	HDDC3	Q8N4P3	179 aa		21.3	■■□□□ 1
PPFIA3-204	ENST00000602492	KDF1	Q8NAX2	398 aa	Predicted RBP	21.3	■■□□□ 1
PPFIA3-204	ENST00000602492	CYFIP2	Q96F07	1278 aa		21.3	■■□□□ 1
PPFIA3-204	ENST00000602492	TWNK	Q96RR1	684 aa		21.3	■■□□□ 1
PPFIA3-204	ENST00000602492	GABRG3	Q99928	467 aa		21.3	■■□□□ 1
PPFIA3-204	ENST00000602492	SCNM1	Q9BWG6	230 aa		21.3	■■□□□ 1
PPFIA3-204	ENST00000602492	GTPBP2	Q9BX10	602 aa	Known RBP	21.3	■■□□□ 1
PPFIA3-204	ENST00000602492	NT5C1A	Q9BXI3	368 aa		21.3	■■□□□ 1
PPFIA3-204	ENST00000602492	PNPLA8	Q9NP80	782 aa		21.3	■■□□□ 1
PPFIA3-204	ENST00000602492	DNMT3L	Q9UJW3	386 aa		21.3	■■□□□ 1
PPFIA3-204	ENST00000602492	RCOR1	Q9UKL0	485 aa		21.3	■■□□□ 1
PPFIA3-204	ENST00000602492	ZMIZ1	Q9ULJ6	1067 aa		21.3	■■□□□ 1
PPFIA3-204	ENST00000602492	CYP8B1	Q9UNU6	501 aa		21.3	■■□□□ 1
PPFIA3-204	ENST00000602492	PKD1L2	Q7Z442	2459 aa		21.3	■■□□□ 1
PPFIA3-204	ENST00000602492		A0A1W2PQH9	124 aa		21.29	■■□□□ 1
PPFIA3-204	ENST00000602492	UPK3BL1	B0FP48	263 aa		21.29	■■□□□ 1
PPFIA3-204	ENST00000602492	PRRT4	C9JH25	899 aa		21.29	■■□□□ 1
PPFIA3-204	ENST00000602492	HHLA1	C9JL84	531 aa		21.29	■■□□□ 1
PPFIA3-204	ENST00000602492	UPK3BL2	E5RIL1	263 aa		21.29	■■□□□ 1
PPFIA3-204	ENST00000602492	MDM4	O15151	490 aa		21.29	■■□□□ 1
PPFIA3-204	ENST00000602492	CALU	O43852	315 aa	Predicted RBP	21.29	■■□□□ 1
PPFIA3-204	ENST00000602492	RARG	P13631	454 aa		21.29	■■□□□ 1
PPFIA3-204	ENST00000602492	PLA2G4A	P47712	749 aa		21.29	■■□□□ 1
PPFIA3-204	ENST00000602492	DGKG	P49619	791 aa		21.29	■■□□□ 1
PPFIA3-204	ENST00000602492	DNM1	Q05193	864 aa	Known RBP	21.29	■■□□□ 1
PPFIA3-204	ENST00000602492	SEMA3B	Q13214	749 aa		21.29	■■□□□ 1
PPFIA3-204	ENST00000602492	C10orf120	Q5SQS8	335 aa		21.29	■■□□□ 1
PPFIA3-204	ENST00000602492	C1orf220	Q5T0J3	134 aa		21.29	■■□□□ 1
PPFIA3-204	ENST00000602492	KIAA1211L	Q6NV74	962 aa		21.29	■■□□□ 1
PPFIA3-204	ENST00000602492	TOGARAM2	Q6ZUX3	1019 aa		21.29	■■□□□ 1
PPFIA3-204	ENST00000602492	PIP4P1	Q86T03	277 aa		21.29	■■□□□ 1
PPFIA3-204	ENST00000602492	DNAI2	Q9GZS0	605 aa		21.29	■■□□□ 1
PPFIA3-204	ENST00000602492	CYP3A43	Q9HB55	503 aa		21.29	■■□□□ 1
PPFIA3-204	ENST00000602492	NMUR1	Q9HB89	426 aa		21.29	■■□□□ 1
PPFIA3-204	ENST00000602492	CAPN10	Q9HC96	672 aa		21.29	■■□□□ 1
PPFIA3-204	ENST00000602492	FSCN3	Q9NQT6	498 aa		21.29	■■□□□ 1
PPFIA3-204	ENST00000602492	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	21.29	■■□□□ 1
PPFIA3-204	ENST00000602492	USP25	Q9UHP3	1055 aa		21.29	■■□□□ 1
PPFIA3-204	ENST00000602492	CEP192	Q8TEP8	1941 aa		21.29	■■□□□ 1
PPFIA3-204	ENST00000602492	TMEM8B	A6NDV4	472 aa		21.28	■■□□□ 1
PPFIA3-204	ENST00000602492	MAPK13	O15264	365 aa		21.28	■■□□□ 1
PPFIA3-204	ENST00000602492	OPHN1	O60890	802 aa		21.28	■■□□□ 1
PPFIA3-204	ENST00000602492	MYL1	P05976	194 aa		21.28	■■□□□ 1
PPFIA3-204	ENST00000602492	PSEN1	P49768	467 aa		21.28	■■□□□ 1
PPFIA3-204	ENST00000602492	VAMP7	P51809	220 aa		21.28	■■□□□ 1
PPFIA3-204	ENST00000602492	TADA2B	Q86TJ2	420 aa		21.28	■■□□□ 1
PPFIA3-204	ENST00000602492	BHMT	Q93088	406 aa		21.28	■■□□□ 1
PPFIA3-204	ENST00000602492	ERLEC1	Q96DZ1	483 aa		21.28	■■□□□ 1
PPFIA3-204	ENST00000602492	HSPA12B	Q96MM6	686 aa		21.28	■■□□□ 1
PPFIA3-204	ENST00000602492	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	21.28	■■□□□ 1
PPFIA3-204	ENST00000602492	CD248	Q9HCU0	757 aa		21.28	■■□□□ 1
PPFIA3-204	ENST00000602492	CACNA2D2	Q9NY47	1150 aa		21.28	■■□□□ 1
PPFIA3-204	ENST00000602492	NAGPA	Q9UK23	515 aa		21.28	■■□□□ 1
PPFIA3-204	ENST00000602492	NUDT5	Q9UKK9	219 aa		21.28	■■□□□ 1
PPFIA3-204	ENST00000602492	RAD54B	Q9Y620	910 aa		21.28	■■□□□ 1
PPFIA3-204	ENST00000602492	GFRA2	O00451	464 aa		21.27	■■□□□ 1
PPFIA3-204	ENST00000602492	KIF20A	O95235	890 aa		21.27	■■□□□ 1
PPFIA3-204	ENST00000602492	PFKFB1	P16118	471 aa		21.27	■■□□□ 1
PPFIA3-204	ENST00000602492	KIF11	P52732	1056 aa		21.27	■■□□□ 1
PPFIA3-204	ENST00000602492	SIM1	P81133	766 aa	Predicted RBP	21.27	■■□□□ 1
PPFIA3-204	ENST00000602492		Q6ZNB5	142 aa		21.27	■■□□□ 1
PPFIA3-204	ENST00000602492	SLC41A1	Q8IVJ1	513 aa		21.27	■■□□□ 1
PPFIA3-204	ENST00000602492	TRIML1	Q8N9V2	468 aa		21.27	■■□□□ 1
PPFIA3-204	ENST00000602492	GATA6	Q92908	595 aa		21.27	■■□□□ 1
PPFIA3-204	ENST00000602492	NIF3L1	Q9GZT8	377 aa		21.27	■■□□□ 1
PPFIA3-204	ENST00000602492	APOBEC3G	Q9HC16	384 aa	Known RBP	21.27	■■□□□ 1
PPFIA3-204	ENST00000602492	TRAF3IP3	Q9Y228	551 aa		21.27	■■□□□ 1
PPFIA3-204	ENST00000602492	ATRX	P46100	2492 aa		21.27	■□□□□ 0.99
PPFIA3-204	ENST00000602492		A0A1B0GVL5	298 aa		21.26	■□□□□ 0.99
PPFIA3-204	ENST00000602492	SPAAR	A0A1B0GVQ0	90 aa		21.26	■□□□□ 0.99
PPFIA3-204	ENST00000602492		A0A1W2PQD8	194 aa		21.26	■□□□□ 0.99

Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms