RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 SLC38A8A6NNN8 435 aa18.74■□□□□ 0.59
VRK3-225ENST00000601912 TEX28O15482 410 aa18.74■□□□□ 0.59
VRK3-225ENST00000601912 CXCL14O95715 111 aa18.74■□□□□ 0.59
VRK3-225ENST00000601912 MAGEA10P43363 369 aaPredicted RBP18.74■□□□□ 0.59
VRK3-225ENST00000601912 ALDH1A3P47895 512 aa18.74■□□□□ 0.59
VRK3-225ENST00000601912 PSEN1P49768 467 aa18.74■□□□□ 0.59
VRK3-225ENST00000601912 ATXN1P54253 815 aaKnown RBP18.74■□□□□ 0.59
VRK3-225ENST00000601912 USP46P62068 366 aa18.74■□□□□ 0.59
VRK3-225ENST00000601912 PITX1P78337 314 aaPredicted RBP18.74■□□□□ 0.59
VRK3-225ENST00000601912 KAZNQ674X7 775 aa18.74■□□□□ 0.59
VRK3-225ENST00000601912 SCD5Q86SK9 330 aa18.74■□□□□ 0.59
VRK3-225ENST00000601912 FAM131BQ86XD5 332 aa18.74■□□□□ 0.59
VRK3-225ENST00000601912 PSTKQ8IV42 348 aaKnown RBP18.74■□□□□ 0.59
VRK3-225ENST00000601912 STKLD1Q8NE28 680 aa18.74■□□□□ 0.59
VRK3-225ENST00000601912 GIPC2Q8TF65 315 aa18.74■□□□□ 0.59
VRK3-225ENST00000601912 MAGOHBQ96A72 148 aaKnown RBP18.74■□□□□ 0.59
VRK3-225ENST00000601912 LRRC1Q9BTT6 524 aa18.74■□□□□ 0.59
VRK3-225ENST00000601912 CALN1Q9BXU9 219 aa18.74■□□□□ 0.59
VRK3-225ENST00000601912 MAK16Q9BXY0 300 aaKnown RBP18.74■□□□□ 0.59
VRK3-225ENST00000601912 DDX47Q9H0S4 455 aaKnown RBP18.74■□□□□ 0.59
VRK3-225ENST00000601912 TLR8Q9NR97 1041 aaKnown RBP18.74■□□□□ 0.59
VRK3-225ENST00000601912 TMEM51Q9NW97 253 aa18.74■□□□□ 0.59
VRK3-225ENST00000601912 DDIT4Q9NX09 232 aa18.74■□□□□ 0.59
VRK3-225ENST00000601912 NR2E1Q9Y466 385 aa18.74■□□□□ 0.59
VRK3-225ENST00000601912 TARSL2A2RTX5 802 aaKnown RBP18.73■□□□□ 0.59
VRK3-225ENST00000601912 PRRG1O14668 218 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 PHF2O75151 1096 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 TUBBP07437 444 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 KRT10P13645 584 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 ATF6P18850 670 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 CHRNA3P32297 505 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 AIF1P55008 147 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 KLF1Q13351 362 aaPredicted RBP18.73■□□□□ 0.59
VRK3-225ENST00000601912 C9orf50Q5SZB4 431 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 OTUD1Q5VV17 481 aaPredicted RBP18.73■□□□□ 0.59
VRK3-225ENST00000601912 MAATS1Q7Z4T9 603 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 VSIG1Q86XK7 387 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 PRELID2Q8N945 189 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 ADAM32Q8TC27 787 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 RUNDC3BQ96NL0 473 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.73■□□□□ 0.59
VRK3-225ENST00000601912 CALCOCO1Q9P1Z2 691 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.73■□□□□ 0.59
VRK3-225ENST00000601912 SEC24AO95486 1093 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 UBE3AQ05086 875 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 TAF10Q12962 218 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 VEPH1Q14D04 833 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 TAZQ16635 292 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 CYP1B1Q16678 543 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 ARL13BQ3SXY8 428 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 ANKS1BQ7Z6G8 1248 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 TCEAL8Q8IYN2 117 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 DQX1Q8TE96 717 aaKnown RBP18.73■□□□□ 0.59
VRK3-225ENST00000601912 TCF25Q9BQ70 676 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 EMILIN2Q9BXX0 1053 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 EPC1Q9H2F5 836 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 ANKZF1Q9H8Y5 726 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 NMUR1Q9HB89 426 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 ALG13Q9NP73 1137 aaKnown RBP18.73■□□□□ 0.59
VRK3-225ENST00000601912 ENTPD7Q9NQZ7 604 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 PIGVQ9NUD9 493 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.73■□□□□ 0.59
VRK3-225ENST00000601912 GMIPQ9P107 970 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 AP4E1Q9UPM8 1137 aa18.73■□□□□ 0.59
VRK3-225ENST00000601912 RB1P06400 928 aa18.72■□□□□ 0.59
VRK3-225ENST00000601912 ADH1AP07327 375 aa18.72■□□□□ 0.59
VRK3-225ENST00000601912 CD48P09326 243 aa18.72■□□□□ 0.59
VRK3-225ENST00000601912 CNPP09543 421 aaKnown RBP18.72■□□□□ 0.59
VRK3-225ENST00000601912 CSH1P0DML2 217 aa18.72■□□□□ 0.59
VRK3-225ENST00000601912 CSH2P0DML3 217 aa18.72■□□□□ 0.59
VRK3-225ENST00000601912 MCM3P25205 808 aa18.72■□□□□ 0.59
VRK3-225ENST00000601912 ARSEP51690 589 aa18.72■□□□□ 0.59
VRK3-225ENST00000601912 MTMR3Q13615 1198 aa18.72■□□□□ 0.59
VRK3-225ENST00000601912 SHHQ15465 462 aa18.72■□□□□ 0.59
VRK3-225ENST00000601912 SIX1Q15475 284 aaPredicted RBP18.72■□□□□ 0.59
VRK3-225ENST00000601912 TAF12Q16514 161 aa18.72■□□□□ 0.59
VRK3-225ENST00000601912 DPYSL2Q16555 572 aa18.72■□□□□ 0.59
VRK3-225ENST00000601912 ZC3H12AQ5D1E8 599 aaKnown RBP18.72■□□□□ 0.59
VRK3-225ENST00000601912 TAC4Q86UU9 113 aa18.72■□□□□ 0.59
VRK3-225ENST00000601912 ZDHHC14Q8IZN3 488 aa18.72■□□□□ 0.59
VRK3-225ENST00000601912 CCDC185Q8N715 623 aa18.72■□□□□ 0.59
VRK3-225ENST00000601912 HERPUD2Q9BSE4 406 aa18.72■□□□□ 0.59
VRK3-225ENST00000601912 TTLL2Q9BWV7 592 aa18.72■□□□□ 0.59
VRK3-225ENST00000601912 DHX35Q9H5Z1 703 aaKnown RBP18.72■□□□□ 0.59
VRK3-225ENST00000601912 WDCPQ9H6R7 721 aa18.72■□□□□ 0.59
VRK3-225ENST00000601912 GPATCH2LQ9NWQ4 482 aa18.72■□□□□ 0.59
VRK3-225ENST00000601912 CLIC5Q9NZA1 410 aa18.72■□□□□ 0.59
VRK3-225ENST00000601912 FZD10Q9ULW2 581 aa18.72■□□□□ 0.59
VRK3-225ENST00000601912 MAGED2Q9UNF1 606 aaPredicted RBP18.72■□□□□ 0.59
VRK3-225ENST00000601912 YIPF1Q9Y548 306 aa18.72■□□□□ 0.59
VRK3-225ENST00000601912 C5orf67F2Z3F1 127 aa18.71■□□□□ 0.59
VRK3-225ENST00000601912 TFDP2Q14188 446 aa18.71■□□□□ 0.59
VRK3-225ENST00000601912 DPYSL3Q14195 570 aa18.71■□□□□ 0.59
VRK3-225ENST00000601912 PPP6R3Q5H9R7 873 aaPredicted RBP18.71■□□□□ 0.59
VRK3-225ENST00000601912 EFHC2Q5JST6 749 aa18.71■□□□□ 0.59
VRK3-225ENST00000601912 RFX6Q8HWS3 928 aa18.71■□□□□ 0.59
VRK3-225ENST00000601912 C12orf50Q8NA57 414 aaPredicted RBP18.71■□□□□ 0.59
VRK3-225ENST00000601912 FAM71BQ8TC56 605 aa18.71■□□□□ 0.59
VRK3-225ENST00000601912 RNF34Q969K3 372 aa18.71■□□□□ 0.59
VRK3-225ENST00000601912 NTAN1Q96AB6 310 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms