RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 OR4Q2P0C623 313 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 ATP5DP30049 168 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 RFC1P35251 1148 aaPredicted RBP12.2□□□□□ -0.46
VRK3-223ENST00000601341 SCNN1AP37088 669 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 SLC6A3Q01959 620 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 KRT17Q04695 432 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 PTK6Q13882 451 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 C6orf89Q6UWU4 347 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 FAM183BPQ6ZVS7 135 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 SIX6OS1Q8N1H7 587 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 FNIP1Q8TF40 1166 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 CLP1Q92989 425 aaKnown RBP12.2□□□□□ -0.46
VRK3-223ENST00000601341 KCNK16Q96T55 309 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 VN1R3Q9BXE9 311 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 CENPHQ9H3R5 247 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 PNPLA8Q9NP80 782 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 METTL5Q9NRN9 209 aaKnown RBP12.2□□□□□ -0.46
VRK3-223ENST00000601341 PCDHB5Q9Y5E4 795 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 BACE2Q9Y5Z0 518 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 TSC2P49815 1807 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 NDC80O14777 642 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 RIPK2O43353 540 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 TCEA3O75764 348 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 LCP1P13796 627 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 CPB1P15086 417 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 CETN2P41208 172 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 LMNB2Q03252 620 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 GPR17Q13304 367 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 PIGHQ14442 188 aaPredicted RBP12.2□□□□□ -0.46
VRK3-223ENST00000601341 PSMD5Q16401 504 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 CCNG2Q16589 344 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 ERMARDQ5T6L9 678 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 RASIP1Q5U651 963 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 TTC19Q6DKK2 380 aaPredicted RBP12.2□□□□□ -0.46
VRK3-223ENST00000601341 PRSS55Q6UWB4 352 aaPredicted RBP12.2□□□□□ -0.46
VRK3-223ENST00000601341 OLFML1Q6UWY5 402 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 VSTM1Q6UX27 236 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 TAOK1Q7L7X3 1001 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 ADAT2Q7Z6V5 191 aaKnown RBP12.2□□□□□ -0.46
VRK3-223ENST00000601341 KATNAL2Q8IYT4 538 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 OTUD6BQ8N6M0 293 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 ZMIZ2Q8NF64 920 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 ATL2Q8NHH9 583 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 CCHCR1Q8TD31 782 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 SP7Q8TDD2 431 aaPredicted RBP12.2□□□□□ -0.46
VRK3-223ENST00000601341 RNF25Q96BH1 459 aaPredicted RBP12.2□□□□□ -0.46
VRK3-223ENST00000601341 HERC2P3Q9BVR0 1158 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 RHOBTB2Q9BYZ6 727 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 ABI2Q9NYB9 513 aaPredicted RBP12.2□□□□□ -0.46
VRK3-223ENST00000601341 MTRRQ9UBK8 725 aa12.2□□□□□ -0.46
VRK3-223ENST00000601341 RGS16O15492 202 aaPredicted RBP12.19□□□□□ -0.46
VRK3-223ENST00000601341 FBXO21O94952 628 aa12.19□□□□□ -0.46
VRK3-223ENST00000601341 GRIK1P39086 918 aa12.19□□□□□ -0.46
VRK3-223ENST00000601341 MAGEA11P43364 429 aa12.19□□□□□ -0.46
VRK3-223ENST00000601341 GLUD2P49448 558 aa12.19□□□□□ -0.46
VRK3-223ENST00000601341 CACNA2D1P54289 1103 aa12.19□□□□□ -0.46
VRK3-223ENST00000601341 ARPP19P56211 112 aa12.19□□□□□ -0.46
VRK3-223ENST00000601341 DSG1Q02413 1049 aa12.19□□□□□ -0.46
VRK3-223ENST00000601341 ADIGQ0VDE8 80 aa12.19□□□□□ -0.46
VRK3-223ENST00000601341 KLF1Q13351 362 aaPredicted RBP12.19□□□□□ -0.46
VRK3-223ENST00000601341 SLC29A2Q14542 456 aa12.19□□□□□ -0.46
VRK3-223ENST00000601341 PPP1R7Q15435 360 aa12.19□□□□□ -0.46
VRK3-223ENST00000601341 TTC31Q49AM3 519 aaPredicted RBP12.19□□□□□ -0.46
VRK3-223ENST00000601341 RAB41Q5JT25 222 aa12.19□□□□□ -0.46
VRK3-223ENST00000601341 LRRC38Q5VT99 294 aa12.19□□□□□ -0.46
VRK3-223ENST00000601341 SLC8B1Q6J4K2 584 aa12.19□□□□□ -0.46
VRK3-223ENST00000601341 AADACL2Q6P093 401 aa12.19□□□□□ -0.46
VRK3-223ENST00000601341 RHBDF2Q6PJF5 856 aa12.19□□□□□ -0.46
VRK3-223ENST00000601341 SLC26A9Q7LBE3 791 aa12.19□□□□□ -0.46
VRK3-223ENST00000601341 RHOT1Q8IXI2 618 aa12.19□□□□□ -0.46
VRK3-223ENST00000601341 EXD1Q8NHP7 514 aa12.19□□□□□ -0.46
VRK3-223ENST00000601341 C2orf15Q8WU43 125 aaKnown RBP12.19□□□□□ -0.46
VRK3-223ENST00000601341 SNF8Q96H20 258 aa12.19□□□□□ -0.46
VRK3-223ENST00000601341 SERPINB12Q96P63 405 aa12.19□□□□□ -0.46
VRK3-223ENST00000601341 TMEM30AQ9NV96 361 aa12.19□□□□□ -0.46
VRK3-223ENST00000601341 HHLA1C9JL84 531 aa12.18□□□□□ -0.46
VRK3-223ENST00000601341 F8VP50 259 aa12.18□□□□□ -0.46
VRK3-223ENST00000601341 FGF18O76093 207 aa12.18□□□□□ -0.46
VRK3-223ENST00000601341 URODP06132 367 aa12.18□□□□□ -0.46
VRK3-223ENST00000601341 CYP2F1P24903 491 aa12.18□□□□□ -0.46
VRK3-223ENST00000601341 TKTL1P51854 596 aa12.18□□□□□ -0.46
VRK3-223ENST00000601341 MRPS5P82675 430 aaKnown RBP12.18□□□□□ -0.46
VRK3-223ENST00000601341 ACAP1Q15027 740 aa12.18□□□□□ -0.46
VRK3-223ENST00000601341 EFHC1Q5JVL4 640 aa12.18□□□□□ -0.46
VRK3-223ENST00000601341 DRICH1Q6PGQ1 229 aaPredicted RBP12.18□□□□□ -0.46
VRK3-223ENST00000601341 RSPO2Q6UXX9 243 aaPredicted RBP12.18□□□□□ -0.46
VRK3-223ENST00000601341 ARCQ7LC44 396 aa12.18□□□□□ -0.46
VRK3-223ENST00000601341 GPR65Q8IYL9 337 aa12.18□□□□□ -0.46
VRK3-223ENST00000601341 VPS52Q8N1B4 723 aa12.18□□□□□ -0.46
VRK3-223ENST00000601341 NIPA2Q8N8Q9 360 aa12.18□□□□□ -0.46
VRK3-223ENST00000601341 CCDC89Q8N998 374 aa12.18□□□□□ -0.46
VRK3-223ENST00000601341 FBXO22Q8NEZ5 403 aa12.18□□□□□ -0.46
VRK3-223ENST00000601341 JOSD2Q8TAC2 188 aa12.18□□□□□ -0.46
VRK3-223ENST00000601341 SPPL2BQ8TCT7 592 aa12.18□□□□□ -0.46
VRK3-223ENST00000601341 RAPGEF5Q92565 580 aa12.18□□□□□ -0.46
VRK3-223ENST00000601341 PIWIL1Q96J94 861 aaKnown RBP12.18□□□□□ -0.46
VRK3-223ENST00000601341 XPO6Q96QU8 1125 aaKnown RBP12.18□□□□□ -0.46
VRK3-223ENST00000601341 ACTR5Q9H9F9 607 aaPredicted RBP12.18□□□□□ -0.46
VRK3-223ENST00000601341 CNGB3Q9NQW8 809 aa12.18□□□□□ -0.46
VRK3-223ENST00000601341 BCCIPQ9P287 314 aaKnown RBP eCLIP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms