RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 RPP25Q9BUL9 199 aaKnown RBP19.05■□□□□ 0.64
LIG1-216ENST00000598938 SMG9Q9H0W8 520 aaKnown RBP19.05■□□□□ 0.64
LIG1-216ENST00000598938 KIF9Q9HAQ2 790 aa19.05■□□□□ 0.64
LIG1-216ENST00000598938 ZFP14Q9HCL3 533 aa19.05■□□□□ 0.64
LIG1-216ENST00000598938 TDP1Q9NUW8 608 aa19.05■□□□□ 0.64
LIG1-216ENST00000598938 OBP2AQ9NY56 170 aa19.05■□□□□ 0.64
LIG1-216ENST00000598938 ARHGAP26Q9UNA1 814 aa19.05■□□□□ 0.64
LIG1-216ENST00000598938 CCL26Q9Y258 94 aa19.05■□□□□ 0.64
LIG1-216ENST00000598938 LTFP02788 710 aa19.04■□□□□ 0.64
LIG1-216ENST00000598938 RALAP11233 206 aa19.04■□□□□ 0.64
LIG1-216ENST00000598938 TCF3P15923 654 aa19.04■□□□□ 0.64
LIG1-216ENST00000598938 TNFAIP3P21580 790 aa19.04■□□□□ 0.64
LIG1-216ENST00000598938 MMP8P22894 467 aa19.04■□□□□ 0.64
LIG1-216ENST00000598938 BSPRYQ5W0U4 402 aa19.04■□□□□ 0.64
LIG1-216ENST00000598938 KLHDC10Q6PID8 442 aa19.04■□□□□ 0.64
LIG1-216ENST00000598938 ZC3H14Q6PJT7 736 aaKnown RBP19.04■□□□□ 0.64
LIG1-216ENST00000598938 FAM183BPQ6ZVS7 135 aa19.04■□□□□ 0.64
LIG1-216ENST00000598938 DRC7Q8IY82 874 aa19.04■□□□□ 0.64
LIG1-216ENST00000598938 CELF5Q8N6W0 485 aaKnown RBP19.04■□□□□ 0.64
LIG1-216ENST00000598938 MSANTD4Q8NCY6 345 aa19.04■□□□□ 0.64
LIG1-216ENST00000598938 PLA2G2FQ9BZM2 168 aa19.04■□□□□ 0.64
LIG1-216ENST00000598938 SYNCQ9H7C4 482 aa19.04■□□□□ 0.64
LIG1-216ENST00000598938 ABCC13Q9NSE7 274 aa19.04■□□□□ 0.64
LIG1-216ENST00000598938 ABHD10Q9NUJ1 306 aa19.04■□□□□ 0.64
LIG1-216ENST00000598938 SEPT11Q9NVA2 429 aaKnown RBP19.04■□□□□ 0.64
LIG1-216ENST00000598938 HEPACAM2A8MVW5 462 aa19.03■□□□□ 0.64
LIG1-216ENST00000598938 AKR1B15C9JRZ8 316 aaPredicted RBP19.03■□□□□ 0.64
LIG1-216ENST00000598938 ADCY5O95622 1261 aa19.03■□□□□ 0.64
LIG1-216ENST00000598938 TBX18O95935 607 aa19.03■□□□□ 0.64
LIG1-216ENST00000598938 SRFP11831 508 aa19.03■□□□□ 0.64
LIG1-216ENST00000598938 CDC25BP30305 580 aa19.03■□□□□ 0.64
LIG1-216ENST00000598938 ATP5C1P36542 298 aaKnown RBP19.03■□□□□ 0.64
LIG1-216ENST00000598938 ADKP55263 362 aaKnown RBP19.03■□□□□ 0.64
LIG1-216ENST00000598938 GOLGA8FQ08AF8 430 aa19.03■□□□□ 0.64
LIG1-216ENST00000598938 GOLGA8DPQ0D2H9 430 aa19.03■□□□□ 0.64
LIG1-216ENST00000598938 USP4Q13107 963 aa19.03■□□□□ 0.64
LIG1-216ENST00000598938 TDRD12Q587J7 1177 aaKnown RBP19.03■□□□□ 0.64
LIG1-216ENST00000598938 BTBD8Q5XKL5 378 aa19.03■□□□□ 0.64
LIG1-216ENST00000598938 WDR59Q6PJI9 974 aa19.03■□□□□ 0.64
LIG1-216ENST00000598938 OLFML1Q6UWY5 402 aa19.03■□□□□ 0.64
LIG1-216ENST00000598938 VITQ6UXI7 678 aa19.03■□□□□ 0.64
LIG1-216ENST00000598938 BEND5Q7L4P6 421 aa19.03■□□□□ 0.64
LIG1-216ENST00000598938 TADA2BQ86TJ2 420 aa19.03■□□□□ 0.64
LIG1-216ENST00000598938 XYLT1Q86Y38 959 aa19.03■□□□□ 0.64
LIG1-216ENST00000598938 ZDHHC17Q8IUH5 632 aa19.03■□□□□ 0.64
LIG1-216ENST00000598938 CNGA4Q8IV77 575 aa19.03■□□□□ 0.64
LIG1-216ENST00000598938 MFSD6LQ8IWD5 586 aa19.03■□□□□ 0.64
LIG1-216ENST00000598938 SLC44A3Q8N4M1 653 aa19.03■□□□□ 0.64
LIG1-216ENST00000598938 SLC30A5Q8TAD4 765 aa19.03■□□□□ 0.64
LIG1-216ENST00000598938 C18orf8Q96DM3 657 aa19.03■□□□□ 0.64
LIG1-216ENST00000598938 PIWIL1Q96J94 861 aaKnown RBP19.03■□□□□ 0.64
LIG1-216ENST00000598938 ZFRQ96KR1 1074 aaKnown RBP19.03■□□□□ 0.64
LIG1-216ENST00000598938 LRRC3BQ96PB8 259 aa19.03■□□□□ 0.64
LIG1-216ENST00000598938 ASNSD1Q9NWL6 643 aa19.03■□□□□ 0.64
LIG1-216ENST00000598938 CPQQ9Y646 472 aa19.03■□□□□ 0.64
LIG1-216ENST00000598938 OTOGLQ3ZCN5 2332 aa19.02■□□□□ 0.64
LIG1-216ENST00000598938 HELZP42694 1942 aaKnown RBP19.02■□□□□ 0.64
LIG1-216ENST00000598938 FAM170AA1A519 330 aa19.02■□□□□ 0.64
LIG1-216ENST00000598938 DDX3XO00571 662 aaKnown RBP eCLIP19.02■□□□□ 0.64
LIG1-216ENST00000598938 DPYSL4O14531 572 aa19.02■□□□□ 0.64
LIG1-216ENST00000598938 FYNP06241 537 aa19.02■□□□□ 0.64
LIG1-216ENST00000598938 GLI1P08151 1106 aa19.02■□□□□ 0.64
LIG1-216ENST00000598938 MBL2P11226 248 aaPredicted RBP19.02■□□□□ 0.64
LIG1-216ENST00000598938 SCNN1AP37088 669 aa19.02■□□□□ 0.64
LIG1-216ENST00000598938 NSFP46459 744 aaKnown RBP19.02■□□□□ 0.64
LIG1-216ENST00000598938 ZXDBP98169 803 aa19.02■□□□□ 0.64
LIG1-216ENST00000598938 SLC6A3Q01959 620 aa19.02■□□□□ 0.64
LIG1-216ENST00000598938 PTP4A2Q12974 167 aa19.02■□□□□ 0.64
LIG1-216ENST00000598938 C10orf120Q5SQS8 335 aa19.02■□□□□ 0.64
LIG1-216ENST00000598938 OR6B2Q6IFH4 312 aa19.02■□□□□ 0.64
LIG1-216ENST00000598938 MMS22LQ6ZRQ5 1243 aa19.02■□□□□ 0.64
LIG1-216ENST00000598938 PHF13Q86YI8 300 aaPredicted RBP19.02■□□□□ 0.64
LIG1-216ENST00000598938 RIN3Q8TB24 985 aa19.02■□□□□ 0.64
LIG1-216ENST00000598938 DEPDC1BQ8WUY9 529 aa19.02■□□□□ 0.64
LIG1-216ENST00000598938 EDEM1Q92611 657 aa19.02■□□□□ 0.64
LIG1-216ENST00000598938 GOLGA1Q92805 767 aa19.02■□□□□ 0.64
LIG1-216ENST00000598938 OLA1Q9NTK5 396 aaKnown RBP19.02■□□□□ 0.64
LIG1-216ENST00000598938 ARHGAP20Q9P2F6 1191 aa19.02■□□□□ 0.64
LIG1-216ENST00000598938 DNMT3LQ9UJW3 386 aa19.02■□□□□ 0.64
LIG1-216ENST00000598938 NUDT5Q9UKK9 219 aa19.02■□□□□ 0.64
LIG1-216ENST00000598938 KRBA1A5PL33 1030 aa19.01■□□□□ 0.63
LIG1-216ENST00000598938 PLEKP08567 350 aaPredicted RBP19.01■□□□□ 0.63
LIG1-216ENST00000598938 FCHO2Q0JRZ9 810 aa19.01■□□□□ 0.63
LIG1-216ENST00000598938 TAF5Q15542 800 aa19.01■□□□□ 0.63
LIG1-216ENST00000598938 ZNF77Q15935 545 aa19.01■□□□□ 0.63
LIG1-216ENST00000598938 C2CD6Q53TS8 623 aa19.01■□□□□ 0.63
LIG1-216ENST00000598938 EFHC1Q5JVL4 640 aa19.01■□□□□ 0.63
LIG1-216ENST00000598938 ACAD10Q6JQN1 1059 aa19.01■□□□□ 0.63
LIG1-216ENST00000598938 PPP1R2P3Q6NXS1 205 aa19.01■□□□□ 0.63
LIG1-216ENST00000598938 MSANTD2Q6P1R3 559 aa19.01■□□□□ 0.63
LIG1-216ENST00000598938 TOGARAM2Q6ZUX3 1019 aa19.01■□□□□ 0.63
LIG1-216ENST00000598938 MON1BQ7L1V2 547 aa19.01■□□□□ 0.63
LIG1-216ENST00000598938 SLC26A9Q7LBE3 791 aa19.01■□□□□ 0.63
LIG1-216ENST00000598938 TC2NQ8N9U0 490 aa19.01■□□□□ 0.63
LIG1-216ENST00000598938 BPIFB1Q8TDL5 484 aa19.01■□□□□ 0.63
LIG1-216ENST00000598938 SH3RF2Q8TEC5 729 aa19.01■□□□□ 0.63
LIG1-216ENST00000598938 FAM149B1Q96BN6 582 aa19.01■□□□□ 0.63
LIG1-216ENST00000598938 TRIM62Q9BVG3 475 aa19.01■□□□□ 0.63
LIG1-216ENST00000598938 KLF16Q9BXK1 252 aaPredicted RBP19.01■□□□□ 0.63
LIG1-216ENST00000598938 NACA2Q9H009 215 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms