RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 CYP3A5P20815 502 aa14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 CASP4P49662 377 aa14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 MARSP56192 900 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 POU5F1Q01860 360 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 KCNC4Q03721 635 aa14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 SYCP2LQ5T4T6 812 aa14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 DHRS13Q6UX07 377 aa14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 THEM5Q8N1Q8 247 aa14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 GPD1LQ8N335 351 aa14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 NXPE2Q96DL1 559 aa14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 FAM212AQ96EL1 285 aa14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 MSTO1Q9BUK6 570 aa14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 MIR1-1HGQ9H1L0 117 aa14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 KIAA1586Q9HCI6 787 aa14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 TMLHEQ9NVH6 421 aa14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 UXTQ9UBK9 157 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 AGO2Q9UKV8 859 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 BTBD3Q9Y2F9 522 aa14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 COL5A1P20908 1838 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-218ENST00000598907 TEX51A0A1B0GUA7 166 aa14.74□□□□□ -0.05
SHKBP1-218ENST00000598907 BECN2A8MW95 431 aa14.74□□□□□ -0.05
SHKBP1-218ENST00000598907 LACTBL1A8MY62 500 aa14.74□□□□□ -0.05
SHKBP1-218ENST00000598907 SLC16A3O15427 465 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-218ENST00000598907 RRP8O43159 456 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-218ENST00000598907 CILPO75339 1184 aa14.74□□□□□ -0.05
SHKBP1-218ENST00000598907 CLTAP09496 248 aa14.74□□□□□ -0.05
SHKBP1-218ENST00000598907 NDUFV2P19404 249 aa14.74□□□□□ -0.05
SHKBP1-218ENST00000598907 CYP2J2P51589 502 aa14.74□□□□□ -0.05
SHKBP1-218ENST00000598907 CLDN6P56747 220 aa14.74□□□□□ -0.05
SHKBP1-218ENST00000598907 CXADRP78310 365 aa14.74□□□□□ -0.05
SHKBP1-218ENST00000598907 DHCR24Q15392 516 aa14.74□□□□□ -0.05
SHKBP1-218ENST00000598907 ZBTB6Q15916 424 aa14.74□□□□□ -0.05
SHKBP1-218ENST00000598907 ZNF513Q8N8E2 541 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-218ENST00000598907 RNF214Q8ND24 703 aa14.74□□□□□ -0.05
SHKBP1-218ENST00000598907 CDC6Q99741 560 aa14.74□□□□□ -0.05
SHKBP1-218ENST00000598907 ZDHHC5Q9C0B5 715 aa14.74□□□□□ -0.05
SHKBP1-218ENST00000598907 SLC6A17Q9H1V8 727 aa14.74□□□□□ -0.05
SHKBP1-218ENST00000598907 PLEKHA5Q9HAU0 1116 aa14.74□□□□□ -0.05
SHKBP1-218ENST00000598907 GCNT4Q9P109 453 aa14.74□□□□□ -0.05
SHKBP1-218ENST00000598907 CPSF3Q9UKF6 684 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-218ENST00000598907 LEFTY2O00292 366 aa14.73□□□□□ -0.05
SHKBP1-218ENST00000598907 CYB561D2O14569 222 aa14.73□□□□□ -0.05
SHKBP1-218ENST00000598907 FLRT2O43155 660 aa14.73□□□□□ -0.05
SHKBP1-218ENST00000598907 EXOC3O60645 756 aa14.73□□□□□ -0.05
SHKBP1-218ENST00000598907 NOL4O94818 638 aa14.73□□□□□ -0.05
SHKBP1-218ENST00000598907 DKK1O94907 266 aa14.73□□□□□ -0.05
SHKBP1-218ENST00000598907 CER1O95813 267 aa14.73□□□□□ -0.05
SHKBP1-218ENST00000598907 GNA14O95837 355 aa14.73□□□□□ -0.05
SHKBP1-218ENST00000598907 CYP11A1P05108 521 aa14.73□□□□□ -0.05
SHKBP1-218ENST00000598907 ADRB2P07550 413 aa14.73□□□□□ -0.05
SHKBP1-218ENST00000598907 HDCP19113 662 aa14.73□□□□□ -0.05
SHKBP1-218ENST00000598907 PSMC2P35998 433 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-218ENST00000598907 GRIA2P42262 883 aa14.73□□□□□ -0.05
SHKBP1-218ENST00000598907 MATKP42679 507 aa14.73□□□□□ -0.05
SHKBP1-218ENST00000598907 ENPEPQ07075 957 aa14.73□□□□□ -0.05
SHKBP1-218ENST00000598907 KYAT1Q16773 422 aa14.73□□□□□ -0.05
SHKBP1-218ENST00000598907 TPD52L1Q16890 204 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-218ENST00000598907 WDR45BQ5MNZ6 344 aa14.73□□□□□ -0.05
SHKBP1-218ENST00000598907 C9orf57Q5W0N0 161 aa14.73□□□□□ -0.05
SHKBP1-218ENST00000598907 WSCD1Q658N2 575 aa14.73□□□□□ -0.05
SHKBP1-218ENST00000598907 DCP1BQ8IZD4 617 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-218ENST00000598907 SAAL1Q96ER3 474 aa14.73□□□□□ -0.05
SHKBP1-218ENST00000598907 EEF2KMTQ96G04 330 aa14.73□□□□□ -0.05
SHKBP1-218ENST00000598907 SMPD4Q9NXE4 827 aa14.73□□□□□ -0.05
SHKBP1-218ENST00000598907 DSEQ9UL01 958 aa14.73□□□□□ -0.05
SHKBP1-218ENST00000598907 ARHGAP26Q9UNA1 814 aa14.73□□□□□ -0.05
SHKBP1-218ENST00000598907 ANAPC1Q9H1A4 1944 aa14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 A0A1B0GTW7 788 aa14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 GOLGA8IPA6NC78 632 aa14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 CAPN8A6NHC0 703 aa14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 LRRC10BA6NIK2 292 aa14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 GOLGA8JA6NMD2 632 aa14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 ZBTB24O43167 697 aaPredicted RBP14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 ZNF217O75362 1048 aa14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 NFICP08651 508 aa14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 ADH5P11766 374 aa14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 CYP2F1P24903 491 aa14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 EEF1GP26641 437 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 ACOT2P49753 483 aa14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 ZXDBP98169 803 aa14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 SMARCB1Q12824 385 aa14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 MYO1EQ12965 1108 aa14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 SMAD1Q15797 465 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 ENOX2Q16206 610 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 SNRNP35Q16560 246 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 TCP11X2Q5H9J9 407 aa14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 C10orf76Q5T2E6 689 aa14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 CEP135Q66GS9 1140 aa14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 JADE1Q6IE81 842 aa14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 KIAA1324Q6UXG2 1013 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 APTXQ7Z2E3 356 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 CBWD2Q8IUF1 395 aa14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 FAM114A1Q8IWE2 563 aa14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 FAM186BQ8IYM0 893 aa14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 TRMT2BQ96GJ1 504 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 FAM213AQ9BRX8 229 aa14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 METTL14Q9HCE5 456 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 LIMA1Q9UHB6 759 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 FRMD4BQ9Y2L6 1034 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms