RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 CCDC192P0DO97 292 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 CHRM1P11229 460 aaPredicted RBP15.82■□□□□ 0.12
LIG1-215ENST00000597901 KIR2DL1P43626 348 aaPredicted RBP15.82■□□□□ 0.12
LIG1-215ENST00000597901 DGKEP52429 567 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 BCAT1P54687 386 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 KDSRQ06136 332 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 BST2Q10589 180 aaKnown RBP15.82■□□□□ 0.12
LIG1-215ENST00000597901 EFEMP1Q12805 493 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 CRY1Q16526 586 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 RSPO4Q2I0M5 234 aaPredicted RBP15.82■□□□□ 0.12
LIG1-215ENST00000597901 PREPLQ4J6C6 727 aaPredicted RBP15.82■□□□□ 0.12
LIG1-215ENST00000597901 PKDCCQ504Y2 493 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 LCLAT1Q6UWP7 414 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 TMEM92Q6UXU6 159 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 Q6ZNB5 142 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 TPGS1Q6ZTW0 290 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 NUDT18Q6ZVK8 323 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 KBTBD6Q86V97 674 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 ARHGEF19Q8IW93 802 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 ALLCQ8N6M5 410 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 IL17RCQ8NAC3 791 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 TXNDC5Q8NBS9 432 aaKnown RBP15.82■□□□□ 0.12
LIG1-215ENST00000597901 TSTD1Q8NFU3 115 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 KCTD13Q8WZ19 329 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 ZC3H10Q96K80 434 aaKnown RBP15.82■□□□□ 0.12
LIG1-215ENST00000597901 MED15Q96RN5 788 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 ZSWIM1Q9BR11 485 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 BBS2Q9BXC9 721 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 MARK1Q9P0L2 795 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 RWDD2AQ9UIY3 292 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 RASAL2Q9UJF2 1139 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 SGK1O00141 431 aa15.81■□□□□ 0.12
LIG1-215ENST00000597901 LRP3O75074 770 aa15.81■□□□□ 0.12
LIG1-215ENST00000597901 KLF8O95600 359 aaPredicted RBP15.81■□□□□ 0.12
LIG1-215ENST00000597901 TYRP14679 529 aa15.81■□□□□ 0.12
LIG1-215ENST00000597901 HNRNPLP14866 589 aaKnown RBP eCLIP15.81■□□□□ 0.12
LIG1-215ENST00000597901 HSF5Q4G112 596 aaPredicted RBP15.81■□□□□ 0.12
LIG1-215ENST00000597901 KCNV2Q8TDN2 545 aa15.81■□□□□ 0.12
LIG1-215ENST00000597901 SLC35F5Q8WV83 523 aa15.81■□□□□ 0.12
LIG1-215ENST00000597901 LOXL4Q96JB6 756 aa15.81■□□□□ 0.12
LIG1-215ENST00000597901 CFAP54Q96N23 3096 aa15.81■□□□□ 0.12
LIG1-215ENST00000597901 XPO6Q96QU8 1125 aaKnown RBP15.81■□□□□ 0.12
LIG1-215ENST00000597901 DCLK3Q9C098 648 aa15.81■□□□□ 0.12
LIG1-215ENST00000597901 SEMA4GQ9NTN9 838 aa15.81■□□□□ 0.12
LIG1-215ENST00000597901 DLL3Q9NYJ7 618 aa15.81■□□□□ 0.12
LIG1-215ENST00000597901 MARCH2Q9P0N8 246 aa15.81■□□□□ 0.12
LIG1-215ENST00000597901 CDV3Q9UKY7 258 aaKnown RBP15.81■□□□□ 0.12
LIG1-215ENST00000597901 ZNF510Q9Y2H8 683 aa15.81■□□□□ 0.12
LIG1-215ENST00000597901 SLC12A8A0AV02 714 aa15.8■□□□□ 0.12
LIG1-215ENST00000597901 NEDD8-MDP1E9PL57 170 aa15.8■□□□□ 0.12
LIG1-215ENST00000597901 DCLK1O15075 740 aa15.8■□□□□ 0.12
LIG1-215ENST00000597901 GABBR2O75899 941 aa15.8■□□□□ 0.12
LIG1-215ENST00000597901 CALCAP01258 141 aa15.8■□□□□ 0.12
LIG1-215ENST00000597901 HMBSP08397 361 aa15.8■□□□□ 0.12
LIG1-215ENST00000597901 CISD3P0C7P0 127 aa15.8■□□□□ 0.12
LIG1-215ENST00000597901 SETSIPP0DME0 302 aa15.8■□□□□ 0.12
LIG1-215ENST00000597901 GCNT1Q02742 428 aa15.8■□□□□ 0.12
LIG1-215ENST00000597901 CSRP2Q16527 193 aa15.8■□□□□ 0.12
LIG1-215ENST00000597901 PLK5Q496M5 336 aa15.8■□□□□ 0.12
LIG1-215ENST00000597901 EOGTQ5NDL2 527 aa15.8■□□□□ 0.12
LIG1-215ENST00000597901 BSPRYQ5W0U4 402 aa15.8■□□□□ 0.12
LIG1-215ENST00000597901 RSRC2Q7L4I2 434 aaKnown RBP15.8■□□□□ 0.12
LIG1-215ENST00000597901 BHLHA9Q7RTU4 235 aa15.8■□□□□ 0.12
LIG1-215ENST00000597901 RASSF3Q86WH2 238 aa15.8■□□□□ 0.12
LIG1-215ENST00000597901 CREBRFQ8IUR6 639 aa15.8■□□□□ 0.12
LIG1-215ENST00000597901 KREMEN1Q96MU8 473 aa15.8■□□□□ 0.12
LIG1-215ENST00000597901 IPO9Q96P70 1041 aaKnown RBP15.8■□□□□ 0.12
LIG1-215ENST00000597901 INTS2Q9H0H0 1204 aaKnown RBP15.8■□□□□ 0.12
LIG1-215ENST00000597901 ARRDC1-AS1Q9H2J1 176 aa15.8■□□□□ 0.12
LIG1-215ENST00000597901 ZDHHC4Q9NPG8 344 aa15.8■□□□□ 0.12
LIG1-215ENST00000597901 DNAJC17Q9NVM6 304 aaKnown RBP15.8■□□□□ 0.12
LIG1-215ENST00000597901 HCN2Q9UL51 889 aa15.8■□□□□ 0.12
LIG1-215ENST00000597901 STRIP2Q9ULQ0 834 aa15.8■□□□□ 0.12
LIG1-215ENST00000597901 INVSQ9Y283 1065 aa15.8■□□□□ 0.12
LIG1-215ENST00000597901 STARD13Q9Y3M8 1113 aa15.8■□□□□ 0.12
LIG1-215ENST00000597901 YJEFN3A6XGL0 299 aa15.79■□□□□ 0.12
LIG1-215ENST00000597901 E7ENQ6 273 aa15.79■□□□□ 0.12
LIG1-215ENST00000597901 CACNG3O60359 315 aa15.79■□□□□ 0.12
LIG1-215ENST00000597901 ADAM23O75077 832 aa15.79■□□□□ 0.12
LIG1-215ENST00000597901 LCP1P13796 627 aa15.79■□□□□ 0.12
LIG1-215ENST00000597901 CHKAP35790 457 aa15.79■□□□□ 0.12
LIG1-215ENST00000597901 RGS7P49802 495 aa15.79■□□□□ 0.12
LIG1-215ENST00000597901 ADIGQ0VDE8 80 aa15.79■□□□□ 0.12
LIG1-215ENST00000597901 STILQ15468 1287 aa15.79■□□□□ 0.12
LIG1-215ENST00000597901 USP39Q53GS9 565 aaKnown RBP15.79■□□□□ 0.12
LIG1-215ENST00000597901 C10orf76Q5T2E6 689 aa15.79■□□□□ 0.12
LIG1-215ENST00000597901 GRAMD4Q6IC98 578 aa15.79■□□□□ 0.12
LIG1-215ENST00000597901 ANO7Q6IWH7 933 aa15.79■□□□□ 0.12
LIG1-215ENST00000597901 PMF1Q6P1K2 205 aa15.79■□□□□ 0.12
LIG1-215ENST00000597901 IRF2BP1Q8IU81 584 aa15.79■□□□□ 0.12
LIG1-215ENST00000597901 SIX6OS1Q8N1H7 587 aa15.79■□□□□ 0.12
LIG1-215ENST00000597901 SCML4Q8N228 414 aa15.79■□□□□ 0.12
LIG1-215ENST00000597901 TERB1Q8NA31 727 aa15.79■□□□□ 0.12
LIG1-215ENST00000597901 MLKLQ8NB16 471 aa15.79■□□□□ 0.12
LIG1-215ENST00000597901 RBBP8NLQ8NC74 664 aaPredicted RBP15.79■□□□□ 0.12
LIG1-215ENST00000597901 P2RY11Q96G91 374 aa15.79■□□□□ 0.12
LIG1-215ENST00000597901 CNOT6LQ96LI5 555 aaKnown RBP15.79■□□□□ 0.12
LIG1-215ENST00000597901 DUSP15Q9H1R2 295 aaPredicted RBP15.79■□□□□ 0.12
LIG1-215ENST00000597901 UBE2TQ9NPD8 197 aaPredicted RBP15.79■□□□□ 0.12
LIG1-215ENST00000597901 CNGB3Q9NQW8 809 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms