RNA–Protein interactions for RNA: ENST00000597288.1

AC009955.2-201, humanhuman

BASIC

Gene AC009955.2, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009955.2-201ENST00000597288 CD48P09326 243 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 PDGFRBP09619 1106 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 RBP3P10745 1247 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 GHRP10912 638 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 SELPP16109 830 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 NR1D1P20393 614 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 GRK4P32298 578 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 RDXP35241 583 aaKnown RBP7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 RPL22P35268 128 aaKnown RBP7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 SSR1P43307 286 aaKnown RBP7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 MAGEA3P43357 314 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 MAGEA11P43364 429 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 RGS7P49802 495 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 IRAK1P51617 712 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 AFF1P51825 1210 aaKnown RBP7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 CDH6P55285 790 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 CDK16Q00536 496 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 NRG1Q02297 640 aaPredicted RBP7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 SMARCB1Q12824 385 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 NR1H3Q13133 447 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 BFSP2Q13515 415 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 SNX1Q13596 522 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 AUHQ13825 339 aaKnown RBP7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 KCNJ11Q14654 390 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 GPNMBQ14956 572 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 PAFAH1B3Q15102 231 aaKnown RBP7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 TAF5Q15542 800 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 C15orf59Q2T9L4 293 aaPredicted RBP7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 PLEKHG4Q58EX7 1191 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 ODF2Q5BJF6 829 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 KCNT1Q5JUK3 1230 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 SH3PXD2AQ5TCZ1 1133 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 CHRDL2Q6WN34 429 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 METTL23Q86XA0 190 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 FAM126BQ8IXS8 530 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 COLGALT2Q8IYK4 626 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 ZNF276Q8N554 614 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 GLIS1Q8NBF1 620 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 PPP1R13LQ8WUF5 828 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 UBLCP1Q8WVY7 318 aaPredicted RBP7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 LINC01599Q8WXQ3 324 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 CPT1BQ92523 772 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 P3H4Q92791 437 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 HAUS1Q96CS2 278 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 LRRC39Q96DD0 335 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 PCED1BQ96HM7 432 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 CFAP57Q96MR6 1250 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 TMEM106CQ9BVX2 250 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 OSBPL7Q9BZF2 842 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 TRIM31Q9BZY9 425 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 BRD8Q9H0E9 1235 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 NRDE2Q9H7Z3 1164 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 WDR6Q9NNW5 1121 aaKnown RBP7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 TRMT13Q9NUP7 481 aaKnown RBP7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 COMMD8Q9NX08 183 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 NINJ2Q9NZG7 142 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 PAK5Q9P286 719 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 OGDHLQ9ULD0 1010 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 TTC3P53804 2025 aa7.55□□□□□ -1.2
AC009955.2-201ENST00000597288 CUL9Q8IWT3 2517 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 DLL1O00548 723 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 TNFRSF10BO14763 440 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 APOL1O14791 398 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 NCAM2O15394 837 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 HOXA2O43364 376 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 HCRTO43612 131 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 TBC1D4O60343 1298 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 ATP2C2O75185 946 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 CDH16O75309 829 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 BEST1O76090 585 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 IVLP07476 585 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 GSTA2P09210 222 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 CTSHP09668 335 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 PECAM1P16284 738 aaPredicted RBP7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 TPSB2P20231 275 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 ADORA2BP29275 332 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 ATP5DP30049 168 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 HOXC13P31276 330 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 ADRA1BP35368 520 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 CHKAP35790 457 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 MDH1P40925 334 aaKnown RBP7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 MAGEA4P43358 317 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 GLUD2P49448 558 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 CXCR3P49682 368 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 TKTL1P51854 596 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 BCAR1P56945 870 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 EIF3EP60228 445 aaKnown RBP7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 PPP2R2AP63151 447 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 ADIGQ0VDE8 80 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 DPYSQ14117 519 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 TPSAB1Q15661 275 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 SMTNL2Q2TAL5 461 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 KRT71Q3SY84 523 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 SLC45A4Q5BKX6 768 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 CLLU1OSQ5K130 101 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 ACBD5Q5T8D3 534 aaPredicted RBP7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 ARMC3Q5W041 872 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 GLB1LQ6UWU2 654 aa7.54□□□□□ -1.2
AC009955.2-201ENST00000597288 VSTM1Q6UX27 236 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms