RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 ST13P5Q8NFI4 369 aaPredicted RBP15.02■□□□□ -0
VRK3-213ENST00000597215 BPIFB1Q8TDL5 484 aa15.02■□□□□ -0
VRK3-213ENST00000597215 SH3RF2Q8TEC5 729 aa15.02■□□□□ -0
VRK3-213ENST00000597215 VCPIP1Q96JH7 1222 aa15.02■□□□□ -0
VRK3-213ENST00000597215 SMPD4Q9NXE4 827 aa15.02■□□□□ -0
VRK3-213ENST00000597215 MARCH2Q9P0N8 246 aa15.02■□□□□ -0
VRK3-213ENST00000597215 RASAL2Q9UJF2 1139 aa15.02■□□□□ -0
VRK3-213ENST00000597215 CCL26Q9Y258 94 aa15.02■□□□□ -0
VRK3-213ENST00000597215 A0A087X0T9 212 aa15.01□□□□□ -0.01
VRK3-213ENST00000597215 GOLGA8SH3BPF8 625 aa15.01□□□□□ -0.01
VRK3-213ENST00000597215 LEFTY2O00292 366 aa15.01□□□□□ -0.01
VRK3-213ENST00000597215 DAB1O75553 588 aa15.01□□□□□ -0.01
VRK3-213ENST00000597215 GRAP2O75791 330 aa15.01□□□□□ -0.01
VRK3-213ENST00000597215 FTLP02792 175 aaPredicted RBP15.01□□□□□ -0.01
VRK3-213ENST00000597215 FAM228BP0C875 321 aa15.01□□□□□ -0.01
VRK3-213ENST00000597215 PSMC3P17980 439 aa15.01□□□□□ -0.01
VRK3-213ENST00000597215 EFEMP1Q12805 493 aa15.01□□□□□ -0.01
VRK3-213ENST00000597215 TDGQ13569 410 aa15.01□□□□□ -0.01
VRK3-213ENST00000597215 TAF5Q15542 800 aa15.01□□□□□ -0.01
VRK3-213ENST00000597215 ZNF77Q15935 545 aa15.01□□□□□ -0.01
VRK3-213ENST00000597215 SLC18A3Q16572 532 aa15.01□□□□□ -0.01
VRK3-213ENST00000597215 MIB1Q86YT6 1006 aa15.01□□□□□ -0.01
VRK3-213ENST00000597215 MFSD6LQ8IWD5 586 aa15.01□□□□□ -0.01
VRK3-213ENST00000597215 YAF2Q8IY57 180 aa15.01□□□□□ -0.01
VRK3-213ENST00000597215 RSAD2Q8WXG1 361 aa15.01□□□□□ -0.01
VRK3-213ENST00000597215 RSPRY1Q96DX4 576 aa15.01□□□□□ -0.01
VRK3-213ENST00000597215 TRIM11Q96F44 468 aa15.01□□□□□ -0.01
VRK3-213ENST00000597215 ZFRQ96KR1 1074 aaKnown RBP15.01□□□□□ -0.01
VRK3-213ENST00000597215 CCDC42Q96M95 316 aa15.01□□□□□ -0.01
VRK3-213ENST00000597215 SLC2A13Q96QE2 648 aa15.01□□□□□ -0.01
VRK3-213ENST00000597215 CHP1Q99653 195 aa15.01□□□□□ -0.01
VRK3-213ENST00000597215 RPP25Q9BUL9 199 aaKnown RBP15.01□□□□□ -0.01
VRK3-213ENST00000597215 ISCUQ9H1K1 167 aa15.01□□□□□ -0.01
VRK3-213ENST00000597215 NHEJ1Q9H9Q4 299 aaPredicted RBP15.01□□□□□ -0.01
VRK3-213ENST00000597215 NAALADL1Q9UQQ1 740 aa15.01□□□□□ -0.01
VRK3-213ENST00000597215 VCANP13611 3396 aa15.01□□□□□ -0.01
VRK3-213ENST00000597215 KIF26AQ9ULI4 1882 aaPredicted RBP15□□□□□ -0.01
VRK3-213ENST00000597215 AKR1B10O60218 316 aa15□□□□□ -0.01
VRK3-213ENST00000597215 FYNP06241 537 aa15□□□□□ -0.01
VRK3-213ENST00000597215 MYBL1P10243 752 aa15□□□□□ -0.01
VRK3-213ENST00000597215 COG7P83436 770 aa15□□□□□ -0.01
VRK3-213ENST00000597215 ASTE1Q2TB18 679 aaPredicted RBP15□□□□□ -0.01
VRK3-213ENST00000597215 CC2D1AQ6P1N0 951 aaPredicted RBP15□□□□□ -0.01
VRK3-213ENST00000597215 DNAJC24Q6P3W2 148 aa15□□□□□ -0.01
VRK3-213ENST00000597215 ALKBH5Q6P6C2 394 aaKnown RBP15□□□□□ -0.01
VRK3-213ENST00000597215 ARCQ7LC44 396 aa15□□□□□ -0.01
VRK3-213ENST00000597215 DEFB106AQ8N104 65 aa15□□□□□ -0.01
VRK3-213ENST00000597215 SLC44A3Q8N4M1 653 aa15□□□□□ -0.01
VRK3-213ENST00000597215 KIAA1958Q8N8K9 716 aa15□□□□□ -0.01
VRK3-213ENST00000597215 C3orf20Q8ND61 904 aa15□□□□□ -0.01
VRK3-213ENST00000597215 TTC16Q8NEE8 873 aa15□□□□□ -0.01
VRK3-213ENST00000597215 DQX1Q8TE96 717 aaKnown RBP15□□□□□ -0.01
VRK3-213ENST00000597215 KHSRPQ92945 711 aaKnown RBP eCLIP15□□□□□ -0.01
VRK3-213ENST00000597215 SELENOOQ9BVL4 669 aa15□□□□□ -0.01
VRK3-213ENST00000597215 TRMT61BQ9BVS5 477 aaKnown RBP15□□□□□ -0.01
VRK3-213ENST00000597215 KLF16Q9BXK1 252 aaPredicted RBP15□□□□□ -0.01
VRK3-213ENST00000597215 PLA2G2FQ9BZM2 168 aa15□□□□□ -0.01
VRK3-213ENST00000597215 SMOC2Q9H3U7 446 aa15□□□□□ -0.01
VRK3-213ENST00000597215 CD320Q9NPF0 282 aa15□□□□□ -0.01
VRK3-213ENST00000597215 METTL5Q9NRN9 209 aaKnown RBP15□□□□□ -0.01
VRK3-213ENST00000597215 THG1LQ9NWX6 298 aaKnown RBP15□□□□□ -0.01
VRK3-213ENST00000597215 CFAP97Q9P2B7 532 aa15□□□□□ -0.01
VRK3-213ENST00000597215 SORCS3Q9UPU3 1222 aa15□□□□□ -0.01
VRK3-213ENST00000597215 SLC12A8A0AV02 714 aa14.99□□□□□ -0.01
VRK3-213ENST00000597215 IRF1P10914 325 aa14.99□□□□□ -0.01
VRK3-213ENST00000597215 FECHP22830 423 aa14.99□□□□□ -0.01
VRK3-213ENST00000597215 NOS2P35228 1153 aa14.99□□□□□ -0.01
VRK3-213ENST00000597215 MATKP42679 507 aa14.99□□□□□ -0.01
VRK3-213ENST00000597215 KPNA1P52294 538 aaPredicted RBP14.99□□□□□ -0.01
VRK3-213ENST00000597215 GSDMDP57764 484 aa14.99□□□□□ -0.01
VRK3-213ENST00000597215 RNASE9P60153 205 aaKnown RBP14.99□□□□□ -0.01
VRK3-213ENST00000597215 ZXDBP98169 803 aa14.99□□□□□ -0.01
VRK3-213ENST00000597215 GFPT1Q06210 699 aaPredicted RBP14.99□□□□□ -0.01
VRK3-213ENST00000597215 FCHO2Q0JRZ9 810 aa14.99□□□□□ -0.01
VRK3-213ENST00000597215 GRM2Q14416 872 aa14.99□□□□□ -0.01
VRK3-213ENST00000597215 GSE1Q14687 1217 aa14.99□□□□□ -0.01
VRK3-213ENST00000597215 MTF1Q14872 753 aa14.99□□□□□ -0.01
VRK3-213ENST00000597215 ARHGAP29Q52LW3 1261 aa14.99□□□□□ -0.01
VRK3-213ENST00000597215 DCAF6Q58WW2 860 aa14.99□□□□□ -0.01
VRK3-213ENST00000597215 CCDC122Q5T0U0 273 aa14.99□□□□□ -0.01
VRK3-213ENST00000597215 SYPL2Q5VXT5 272 aa14.99□□□□□ -0.01
VRK3-213ENST00000597215 PHLDB2Q86SQ0 1253 aa14.99□□□□□ -0.01
VRK3-213ENST00000597215 ANP32BQ92688 251 aaKnown RBP14.99□□□□□ -0.01
VRK3-213ENST00000597215 ZNF653Q96CK0 615 aa14.99□□□□□ -0.01
VRK3-213ENST00000597215 SERPINB11Q96P15 392 aa14.99□□□□□ -0.01
VRK3-213ENST00000597215 LRRC3BQ96PB8 259 aa14.99□□□□□ -0.01
VRK3-213ENST00000597215 GKN1Q9NS71 199 aa14.99□□□□□ -0.01
VRK3-213ENST00000597215 RRN3Q9NYV6 651 aa14.99□□□□□ -0.01
VRK3-213ENST00000597215 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.99□□□□□ -0.01
VRK3-213ENST00000597215 SFMBT1Q9UHJ3 866 aa14.99□□□□□ -0.01
VRK3-213ENST00000597215 TMEM59LQ9UK28 342 aa14.99□□□□□ -0.01
VRK3-213ENST00000597215 LSM7Q9UK45 103 aaKnown RBP14.99□□□□□ -0.01
VRK3-213ENST00000597215 STAP1Q9ULZ2 295 aa14.99□□□□□ -0.01
VRK3-213ENST00000597215 SH3BP1Q9Y3L3 701 aa14.99□□□□□ -0.01
VRK3-213ENST00000597215 HBS1LQ9Y450 684 aaKnown RBP14.99□□□□□ -0.01
VRK3-213ENST00000597215 E2F8A0AVK6 867 aa14.98□□□□□ -0.01
VRK3-213ENST00000597215 ZNF263O14978 683 aa14.98□□□□□ -0.01
VRK3-213ENST00000597215 CHADO15335 359 aa14.98□□□□□ -0.01
VRK3-213ENST00000597215 HMBSP08397 361 aa14.98□□□□□ -0.01
VRK3-213ENST00000597215 KRT3P12035 628 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms