RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-208ENST00000597023 RAB41Q5JT25 222 aa16.35■□□□□ 0.21
PPFIA4-208ENST00000597023 C10orf76Q5T2E6 689 aa16.35■□□□□ 0.21
PPFIA4-208ENST00000597023 KLHDC10Q6PID8 442 aa16.35■□□□□ 0.21
PPFIA4-208ENST00000597023 PRR23CQ6ZRP0 262 aa16.35■□□□□ 0.21
PPFIA4-208ENST00000597023 CREBRFQ8IUR6 639 aa16.35■□□□□ 0.21
PPFIA4-208ENST00000597023 ARHGEF19Q8IW93 802 aa16.35■□□□□ 0.21
PPFIA4-208ENST00000597023 MDGA1Q8NFP4 955 aa16.35■□□□□ 0.21
PPFIA4-208ENST00000597023 LMO3Q8TAP4 145 aa16.35■□□□□ 0.21
PPFIA4-208ENST00000597023 TFAP2BQ92481 460 aa16.35■□□□□ 0.21
PPFIA4-208ENST00000597023 P2RY11Q96G91 374 aa16.35■□□□□ 0.21
PPFIA4-208ENST00000597023 NT5C1BQ96P26 610 aa16.35■□□□□ 0.21
PPFIA4-208ENST00000597023 UBXN6Q9BZV1 441 aa16.35■□□□□ 0.21
PPFIA4-208ENST00000597023 DNAJC17Q9NVM6 304 aaKnown RBP16.35■□□□□ 0.21
PPFIA4-208ENST00000597023 HESX1Q9UBX0 185 aa16.35■□□□□ 0.21
PPFIA4-208ENST00000597023 EBF1Q9UH73 591 aa16.35■□□□□ 0.21
PPFIA4-208ENST00000597023 MYOFQ9NZM1 2061 aa16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 DMXL1Q9Y485 3027 aa16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 SLC12A8A0AV02 714 aa16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 PIK3R2O00459 728 aa16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 XPO1O14980 1071 aaKnown RBP16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 ADAM23O75077 832 aa16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 ZBED1O96006 694 aa16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 VDRP11473 427 aa16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 LCP1P13796 627 aa16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 TBXAS1P24557 533 aaPredicted RBP16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 GBP1P32455 592 aa16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 PSEN1P49768 467 aa16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 RGS7P49802 495 aa16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 BCAT1P54687 386 aa16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 ADIGQ0VDE8 80 aa16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 KCNH2Q12809 1159 aa16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 SF3A2Q15428 464 aaKnown RBP16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 CSRP2Q16527 193 aa16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 GRAMD4Q6IC98 578 aa16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 Q6ZNB5 142 aa16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 TOGARAM2Q6ZUX3 1019 aa16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 RSRC2Q7L4I2 434 aaKnown RBP16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 ERMP1Q7Z2K6 904 aa16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 TADA2BQ86TJ2 420 aa16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 RLN3Q8WXF3 142 aa16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 ZSWIM1Q9BR11 485 aa16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 DUSP15Q9H1R2 295 aaPredicted RBP16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 LRRC4Q9HBW1 653 aa16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 CLIC5Q9NZA1 410 aa16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 CDV3Q9UKY7 258 aaKnown RBP16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 HCN2Q9UL51 889 aa16.34■□□□□ 0.21
PPFIA4-208ENST00000597023 MED19A0JLT2 244 aaPredicted RBP16.33■□□□□ 0.2
PPFIA4-208ENST00000597023 DCDC2BA2VCK2 349 aa16.33■□□□□ 0.2
PPFIA4-208ENST00000597023 PRR5-ARHGAP8B1AHC4 643 aa16.33■□□□□ 0.2
PPFIA4-208ENST00000597023 O00370 1275 aa16.33■□□□□ 0.2
PPFIA4-208ENST00000597023 BCKDHBP21953 392 aa16.33■□□□□ 0.2
PPFIA4-208ENST00000597023 BRD2P25440 801 aaKnown RBP16.33■□□□□ 0.2
PPFIA4-208ENST00000597023 CORO1AP31146 461 aaKnown RBP16.33■□□□□ 0.2
PPFIA4-208ENST00000597023 ARHGAP8P85298 464 aa16.33■□□□□ 0.2
PPFIA4-208ENST00000597023 BST2Q10589 180 aaKnown RBP16.33■□□□□ 0.2
PPFIA4-208ENST00000597023 BHLHA9Q7RTU4 235 aa16.33■□□□□ 0.2
PPFIA4-208ENST00000597023 DENND1CQ8IV53 801 aa16.33■□□□□ 0.2
PPFIA4-208ENST00000597023 TRIM59Q8IWR1 403 aa16.33■□□□□ 0.2
PPFIA4-208ENST00000597023 FRMD1Q8N878 549 aa16.33■□□□□ 0.2
PPFIA4-208ENST00000597023 ZNF513Q8N8E2 541 aaPredicted RBP16.33■□□□□ 0.2
PPFIA4-208ENST00000597023 TERB1Q8NA31 727 aa16.33■□□□□ 0.2
PPFIA4-208ENST00000597023 EHBP1Q8NDI1 1231 aa16.33■□□□□ 0.2
PPFIA4-208ENST00000597023 EDEM1Q92611 657 aa16.33■□□□□ 0.2
PPFIA4-208ENST00000597023 XPO6Q96QU8 1125 aaKnown RBP16.33■□□□□ 0.2
PPFIA4-208ENST00000597023 FAM124BQ9H5Z6 455 aaPredicted RBP16.33■□□□□ 0.2
PPFIA4-208ENST00000597023 CHMP5Q9NZZ3 219 aa16.33■□□□□ 0.2
PPFIA4-208ENST00000597023 MARCH2Q9P0N8 246 aa16.33■□□□□ 0.2
PPFIA4-208ENST00000597023 WDR35Q9P2L0 1181 aa16.33■□□□□ 0.2
PPFIA4-208ENST00000597023 MYO16Q9Y6X6 1858 aa16.33■□□□□ 0.2
PPFIA4-208ENST00000597023 PRRT4C9JH25 899 aa16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 LRP3O75074 770 aa16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 GABBR2O75899 941 aa16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 EPN2O95208 641 aa16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 UBE2HP62256 183 aa16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 COG7P83436 770 aa16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 CETN1Q12798 172 aa16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 USP39Q53GS9 565 aaKnown RBP16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 EOGTQ5NDL2 527 aa16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 EGFLAMQ63HQ2 1017 aa16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 PM20D1Q6GTS8 502 aa16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 WDR87Q6ZQQ6 2873 aa16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 RASSF3Q86WH2 238 aa16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 PGBD3Q8N328 593 aa16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 ARHGAP18Q8N392 663 aa16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 ZNF276Q8N554 614 aa16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 HMGB4Q8WW32 186 aa16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 ZC3H10Q96K80 434 aaKnown RBP16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 CNOT6LQ96LI5 555 aaKnown RBP16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 IPO9Q96P70 1041 aaKnown RBP16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 ACOX2Q99424 681 aa16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 POLMQ9NP87 494 aaPredicted RBP16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 RXFP3Q9NSD7 469 aa16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 KIAA1468Q9P260 1216 aa16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 BCCIPQ9P287 314 aaKnown RBP eCLIP16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 SFMBT1Q9UHJ3 866 aa16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 AGO1Q9UL18 857 aaKnown RBP16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.32■□□□□ 0.2
PPFIA4-208ENST00000597023 TCRBV21S2A2A0A5A6 115 aa16.31■□□□□ 0.2
PPFIA4-208ENST00000597023 YJEFN3A6XGL0 299 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms