RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 RBM10P98175 930 aaKnown RBP23.94■■□□□ 1.42
SPTBN4-210ENST00000596900 ROR1Q01973 937 aa23.94■■□□□ 1.42
SPTBN4-210ENST00000596900 LMNB2Q03252 620 aa23.94■■□□□ 1.42
SPTBN4-210ENST00000596900 NME3Q13232 169 aa23.94■■□□□ 1.42
SPTBN4-210ENST00000596900 DPYSL3Q14195 570 aa23.94■■□□□ 1.42
SPTBN4-210ENST00000596900 BTBD8Q5XKL5 378 aa23.94■■□□□ 1.42
SPTBN4-210ENST00000596900 DENND5BQ6ZUT9 1274 aa23.94■■□□□ 1.42
SPTBN4-210ENST00000596900 SND1Q7KZF4 910 aaKnown RBP eCLIP23.94■■□□□ 1.42
SPTBN4-210ENST00000596900 MTERF4Q7Z6M4 381 aaKnown RBP23.94■■□□□ 1.42
SPTBN4-210ENST00000596900 DDX53Q86TM3 631 aaKnown RBP23.94■■□□□ 1.42
SPTBN4-210ENST00000596900 FAM131BQ86XD5 332 aa23.94■■□□□ 1.42
SPTBN4-210ENST00000596900 FIBCD1Q8N539 461 aa23.94■■□□□ 1.42
SPTBN4-210ENST00000596900 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.94■■□□□ 1.42
SPTBN4-210ENST00000596900 ATG4AQ8WYN0 398 aa23.94■■□□□ 1.42
SPTBN4-210ENST00000596900 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.94■■□□□ 1.42
SPTBN4-210ENST00000596900 SEPT5Q99719 369 aaPredicted RBP23.94■■□□□ 1.42
SPTBN4-210ENST00000596900 HTATIP2Q9BUP3 242 aa23.94■■□□□ 1.42
SPTBN4-210ENST00000596900 SCML2Q9UQR0 700 aa23.94■■□□□ 1.42
SPTBN4-210ENST00000596900 INSL6Q9Y581 213 aa23.94■■□□□ 1.42
SPTBN4-210ENST00000596900 KIAA1671Q9BY89 1806 aa23.93■■□□□ 1.42
SPTBN4-210ENST00000596900 CST8O60676 142 aa23.93■■□□□ 1.42
SPTBN4-210ENST00000596900 HAPLN1P10915 354 aaPredicted RBP23.93■■□□□ 1.42
SPTBN4-210ENST00000596900 ATXN1P54253 815 aaKnown RBP23.93■■□□□ 1.42
SPTBN4-210ENST00000596900 SNX1Q13596 522 aa23.93■■□□□ 1.42
SPTBN4-210ENST00000596900 OTUD1Q5VV17 481 aaPredicted RBP23.93■■□□□ 1.42
SPTBN4-210ENST00000596900 DRICH1Q6PGQ1 229 aaPredicted RBP23.93■■□□□ 1.42
SPTBN4-210ENST00000596900 SYDE1Q6ZW31 735 aaPredicted RBP23.93■■□□□ 1.42
SPTBN4-210ENST00000596900 ATL2Q8NHH9 583 aa23.93■■□□□ 1.42
SPTBN4-210ENST00000596900 FAM71BQ8TC56 605 aa23.93■■□□□ 1.42
SPTBN4-210ENST00000596900 EDEM1Q92611 657 aa23.93■■□□□ 1.42
SPTBN4-210ENST00000596900 SPATA17Q96L03 361 aa23.93■■□□□ 1.42
SPTBN4-210ENST00000596900 CEP295NLQ96MC4 621 aa23.93■■□□□ 1.42
SPTBN4-210ENST00000596900 FAM204AQ9H8W3 233 aa23.93■■□□□ 1.42
SPTBN4-210ENST00000596900 PCDH18Q9HCL0 1135 aa23.93■■□□□ 1.42
SPTBN4-210ENST00000596900 COMMD8Q9NX08 183 aa23.93■■□□□ 1.42
SPTBN4-210ENST00000596900 PLXNA3P51805 1871 aa23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 SYNJ2BP-COX16A0A087WUM0 186 aa23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 WDR27A2RRH5 827 aa23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 ZSCAN5CA6NGD5 496 aaPredicted RBP23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 C2CD2LO14523 706 aa23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 OR1D2P34982 312 aa23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 KRT17Q04695 432 aa23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 ADCY2Q08462 1091 aa23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 ZC3H12AQ5D1E8 599 aaKnown RBP23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 TMEM240Q5SV17 173 aa23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 MON1AQ86VX9 555 aa23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 CCDC114Q96M63 670 aa23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 HINFPQ9BQA5 517 aa23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 ERP44Q9BS26 406 aa23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 MTIF3Q9H2K0 278 aaKnown RBP23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 DHX35Q9H5Z1 703 aaKnown RBP23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 FAM114A2Q9NRY5 505 aa23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 TMEM51Q9NW97 253 aa23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 DDIT4Q9NX09 232 aa23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 COX16Q9P0S2 106 aa23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 R3HDM2Q9Y2K5 976 aaKnown RBP23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 GBP1P32455 592 aa23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 PTGIRP43119 386 aa23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 TUFMP49411 452 aaKnown RBP23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 EPHB4P54760 987 aa23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 PITX1P78337 314 aaPredicted RBP23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 PPP1R7Q15435 360 aa23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 ARL13BQ3SXY8 428 aa23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 PPP6R3Q5H9R7 873 aaPredicted RBP23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 CCDC185Q8N715 623 aa23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 IFT81Q8WYA0 676 aa23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 GPATCH2LQ9NWQ4 482 aa23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 CALCOCO1Q9P1Z2 691 aa23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 HSFX1Q9UBD0 423 aa23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 FZD10Q9ULW2 581 aa23.92■■□□□ 1.42
SPTBN4-210ENST00000596900 ESYT3A0FGR9 886 aa23.91■■□□□ 1.42
SPTBN4-210ENST00000596900 APOC4-APOC2K7ER74 178 aa23.91■■□□□ 1.42
SPTBN4-210ENST00000596900 APOC2P02655 101 aa23.91■■□□□ 1.42
SPTBN4-210ENST00000596900 KCNJ1P48048 391 aa23.91■■□□□ 1.42
SPTBN4-210ENST00000596900 GPR15P49685 360 aa23.91■■□□□ 1.42
SPTBN4-210ENST00000596900 DYNLT1P63172 113 aa23.91■■□□□ 1.42
SPTBN4-210ENST00000596900 DUSP4Q13115 394 aa23.91■■□□□ 1.42
SPTBN4-210ENST00000596900 EFHC2Q5JST6 749 aa23.91■■□□□ 1.42
SPTBN4-210ENST00000596900 TPGS2Q68CL5 300 aa23.91■■□□□ 1.42
SPTBN4-210ENST00000596900 GPR65Q8IYL9 337 aa23.91■■□□□ 1.42
SPTBN4-210ENST00000596900 TTC9BQ8N6N2 239 aa23.91■■□□□ 1.42
SPTBN4-210ENST00000596900 SEC14L1Q92503 715 aa23.91■■□□□ 1.42
SPTBN4-210ENST00000596900 NTAN1Q96AB6 310 aa23.91■■□□□ 1.42
SPTBN4-210ENST00000596900 RNF157Q96PX1 679 aa23.91■■□□□ 1.42
SPTBN4-210ENST00000596900 PIGVQ9NUD9 493 aa23.91■■□□□ 1.42
SPTBN4-210ENST00000596900 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.91■■□□□ 1.42
SPTBN4-210ENST00000596900 RCOR3Q9P2K3 495 aaPredicted RBP23.91■■□□□ 1.42
SPTBN4-210ENST00000596900 SLC27A5Q9Y2P5 690 aa23.91■■□□□ 1.42
SPTBN4-210ENST00000596900 LIASO43766 372 aa23.9■■□□□ 1.42
SPTBN4-210ENST00000596900 ARL4AP40617 200 aa23.9■■□□□ 1.42
SPTBN4-210ENST00000596900 CREMQ03060 361 aa23.9■■□□□ 1.42
SPTBN4-210ENST00000596900 BYSLQ13895 437 aaKnown RBP23.9■■□□□ 1.42
SPTBN4-210ENST00000596900 BEND6Q5SZJ8 279 aaPredicted RBP23.9■■□□□ 1.42
SPTBN4-210ENST00000596900 SDHAF4Q5VUM1 108 aa23.9■■□□□ 1.42
SPTBN4-210ENST00000596900 PHOSPHO2Q8TCD6 241 aa23.9■■□□□ 1.42
SPTBN4-210ENST00000596900 CASKIN2Q8WXE0 1202 aa23.9■■□□□ 1.42
SPTBN4-210ENST00000596900 TRIM51Q9BSJ1 452 aa23.9■■□□□ 1.42
SPTBN4-210ENST00000596900 IL37Q9NZH6 218 aa23.9■■□□□ 1.42
SPTBN4-210ENST00000596900 AFF4Q9UHB7 1163 aaKnown RBP23.9■■□□□ 1.42
SPTBN4-210ENST00000596900 SLC4A7Q9Y6M7 1214 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms