RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 RARGP13631 454 aa16.79■□□□□ 0.28
LINC02560-201ENST00000596379 TRIM21P19474 475 aaKnown RBP16.79■□□□□ 0.28
LINC02560-201ENST00000596379 PLA2G4AP47712 749 aa16.79■□□□□ 0.28
LINC02560-201ENST00000596379 VAMP7P51809 220 aa16.79■□□□□ 0.28
LINC02560-201ENST00000596379 GOLGA8FQ08AF8 430 aa16.79■□□□□ 0.28
LINC02560-201ENST00000596379 GOLGA8DPQ0D2H9 430 aa16.79■□□□□ 0.28
LINC02560-201ENST00000596379 PEAR1Q5VY43 1037 aaPredicted RBP16.79■□□□□ 0.28
LINC02560-201ENST00000596379 UNQ6494/PRO21346Q6UXR6 183 aa16.79■□□□□ 0.28
LINC02560-201ENST00000596379 SLC36A4Q6YBV0 504 aa16.79■□□□□ 0.28
LINC02560-201ENST00000596379 TOGARAM2Q6ZUX3 1019 aa16.79■□□□□ 0.28
LINC02560-201ENST00000596379 CHPFQ8IZ52 775 aa16.79■□□□□ 0.28
LINC02560-201ENST00000596379 IPO4Q8TEX9 1081 aaKnown RBP16.79■□□□□ 0.28
LINC02560-201ENST00000596379 NT5C1AQ9BXI3 368 aa16.79■□□□□ 0.28
LINC02560-201ENST00000596379 NMUR1Q9HB89 426 aa16.79■□□□□ 0.28
LINC02560-201ENST00000596379 APOBEC3GQ9HC16 384 aaKnown RBP16.79■□□□□ 0.28
LINC02560-201ENST00000596379 FSCN3Q9NQT6 498 aa16.79■□□□□ 0.28
LINC02560-201ENST00000596379 MARK1Q9P0L2 795 aa16.79■□□□□ 0.28
LINC02560-201ENST00000596379 CALUO43852 315 aaPredicted RBP16.78■□□□□ 0.28
LINC02560-201ENST00000596379 PFKFB1P16118 471 aa16.78■□□□□ 0.28
LINC02560-201ENST00000596379 GCLMP48507 274 aa16.78■□□□□ 0.28
LINC02560-201ENST00000596379 ZNF33AQ06730 810 aa16.78■□□□□ 0.28
LINC02560-201ENST00000596379 INCA1Q0VD86 236 aa16.78■□□□□ 0.28
LINC02560-201ENST00000596379 DUOXA1Q1HG43 343 aa16.78■□□□□ 0.28
LINC02560-201ENST00000596379 KIAA1211LQ6NV74 962 aa16.78■□□□□ 0.28
LINC02560-201ENST00000596379 HSCBQ8IWL3 235 aa16.78■□□□□ 0.28
LINC02560-201ENST00000596379 SPRYD3Q8NCJ5 442 aa16.78■□□□□ 0.28
LINC02560-201ENST00000596379 SLC32A1Q9H598 525 aa16.78■□□□□ 0.28
LINC02560-201ENST00000596379 CYP3A43Q9HB55 503 aa16.78■□□□□ 0.28
LINC02560-201ENST00000596379 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.78■□□□□ 0.28
LINC02560-201ENST00000596379 USP25Q9UHP3 1055 aa16.78■□□□□ 0.28
LINC02560-201ENST00000596379 DNMT3LQ9UJW3 386 aa16.78■□□□□ 0.28
LINC02560-201ENST00000596379 SLC6A14Q9UN76 642 aa16.78■□□□□ 0.28
LINC02560-201ENST00000596379 TRAF3IP3Q9Y228 551 aa16.78■□□□□ 0.28
LINC02560-201ENST00000596379 PCDHA5Q9Y5H7 936 aa16.78■□□□□ 0.28
LINC02560-201ENST00000596379 IGHV1OR15-9A0A0B4J2B8 117 aa16.77■□□□□ 0.28
LINC02560-201ENST00000596379 ZNF217O75362 1048 aa16.77■□□□□ 0.28
LINC02560-201ENST00000596379 CISD3P0C7P0 127 aa16.77■□□□□ 0.28
LINC02560-201ENST00000596379 CD58P19256 250 aa16.77■□□□□ 0.28
LINC02560-201ENST00000596379 NDUFV2P19404 249 aa16.77■□□□□ 0.28
LINC02560-201ENST00000596379 CMA1P23946 247 aa16.77■□□□□ 0.28
LINC02560-201ENST00000596379 HOXD12P35452 270 aa16.77■□□□□ 0.28
LINC02560-201ENST00000596379 DGKGP49619 791 aa16.77■□□□□ 0.28
LINC02560-201ENST00000596379 KIF11P52732 1056 aa16.77■□□□□ 0.28
LINC02560-201ENST00000596379 ATXN3P54252 364 aaPredicted RBP16.77■□□□□ 0.28
LINC02560-201ENST00000596379 GFPT1Q06210 699 aaPredicted RBP16.77■□□□□ 0.28
LINC02560-201ENST00000596379 PPP3CAQ08209 521 aa16.77■□□□□ 0.28
LINC02560-201ENST00000596379 C10orf120Q5SQS8 335 aa16.77■□□□□ 0.28
LINC02560-201ENST00000596379 KLHDC10Q6PID8 442 aa16.77■□□□□ 0.28
LINC02560-201ENST00000596379 CEP76Q8TAP6 659 aa16.77■□□□□ 0.28
LINC02560-201ENST00000596379 TAS1R2Q8TE23 839 aa16.77■□□□□ 0.28
LINC02560-201ENST00000596379 BHMTQ93088 406 aa16.77■□□□□ 0.28
LINC02560-201ENST00000596379 GABRG3Q99928 467 aa16.77■□□□□ 0.28
LINC02560-201ENST00000596379 SCNM1Q9BWG6 230 aa16.77■□□□□ 0.28
LINC02560-201ENST00000596379 GTPBP2Q9BX10 602 aaKnown RBP16.77■□□□□ 0.28
LINC02560-201ENST00000596379 IMPG2Q9BZV3 1241 aa16.77■□□□□ 0.28
LINC02560-201ENST00000596379 CD248Q9HCU0 757 aa16.77■□□□□ 0.28
LINC02560-201ENST00000596379 PLK2Q9NYY3 685 aa16.77■□□□□ 0.28
LINC02560-201ENST00000596379 NAGPAQ9UK23 515 aa16.77■□□□□ 0.28
LINC02560-201ENST00000596379 CYP8B1Q9UNU6 501 aa16.77■□□□□ 0.28
LINC02560-201ENST00000596379 RAD54BQ9Y620 910 aa16.77■□□□□ 0.28
LINC02560-201ENST00000596379 CACNA1EQ15878 2313 aa16.76■□□□□ 0.27
LINC02560-201ENST00000596379 ZFHX4Q86UP3 3567 aa16.76■□□□□ 0.27
LINC02560-201ENST00000596379 WASH3PC4AMC7 463 aa16.76■□□□□ 0.27
LINC02560-201ENST00000596379 MAPK13O15264 365 aa16.76■□□□□ 0.27
LINC02560-201ENST00000596379 CILPO75339 1184 aa16.76■□□□□ 0.27
LINC02560-201ENST00000596379 KIF20AO95235 890 aa16.76■□□□□ 0.27
LINC02560-201ENST00000596379 MYL1P05976 194 aa16.76■□□□□ 0.27
LINC02560-201ENST00000596379 SERPINF2P08697 491 aa16.76■□□□□ 0.27
LINC02560-201ENST00000596379 TRIM49P0CI25 452 aa16.76■□□□□ 0.27
LINC02560-201ENST00000596379 TRIM49CP0CI26 452 aa16.76■□□□□ 0.27
LINC02560-201ENST00000596379 NR2F2P24468 414 aa16.76■□□□□ 0.27
LINC02560-201ENST00000596379 Q6ZNB5 142 aa16.76■□□□□ 0.27
LINC02560-201ENST00000596379 SCD5Q86SK9 330 aa16.76■□□□□ 0.27
LINC02560-201ENST00000596379 SLC41A1Q8IVJ1 513 aa16.76■□□□□ 0.27
LINC02560-201ENST00000596379 DUSP16Q9BY84 665 aa16.76■□□□□ 0.27
LINC02560-201ENST00000596379 ADAM33Q9BZ11 813 aa16.76■□□□□ 0.27
LINC02560-201ENST00000596379 SLC6A17Q9H1V8 727 aa16.76■□□□□ 0.27
LINC02560-201ENST00000596379 MMRN2Q9H8L6 949 aa16.76■□□□□ 0.27
LINC02560-201ENST00000596379 CAPN10Q9HC96 672 aa16.76■□□□□ 0.27
LINC02560-201ENST00000596379 PNPLA8Q9NP80 782 aa16.76■□□□□ 0.27
LINC02560-201ENST00000596379 CACNA2D2Q9NY47 1150 aa16.76■□□□□ 0.27
LINC02560-201ENST00000596379 ZMIZ1Q9ULJ6 1067 aa16.76■□□□□ 0.27
LINC02560-201ENST00000596379 MAPK8IP1Q9UQF2 711 aa16.76■□□□□ 0.27
LINC02560-201ENST00000596379 HPSEQ9Y251 543 aa16.76■□□□□ 0.27
LINC02560-201ENST00000596379 CHD6Q8TD26 2715 aa16.75■□□□□ 0.27
LINC02560-201ENST00000596379 STC2O76061 302 aa16.75■□□□□ 0.27
LINC02560-201ENST00000596379 PRR29P0C7W0 189 aa16.75■□□□□ 0.27
LINC02560-201ENST00000596379 RALAP11233 206 aa16.75■□□□□ 0.27
LINC02560-201ENST00000596379 KRT13P13646 458 aa16.75■□□□□ 0.27
LINC02560-201ENST00000596379 PSEN1P49768 467 aa16.75■□□□□ 0.27
LINC02560-201ENST00000596379 SEMA3BQ13214 749 aa16.75■□□□□ 0.27
LINC02560-201ENST00000596379 NFIL3Q16649 462 aa16.75■□□□□ 0.27
LINC02560-201ENST00000596379 PPP1R26Q5T8A7 1209 aaPredicted RBP16.75■□□□□ 0.27
LINC02560-201ENST00000596379 INTS8Q75QN2 995 aaKnown RBP16.75■□□□□ 0.27
LINC02560-201ENST00000596379 PIP4P1Q86T03 277 aa16.75■□□□□ 0.27
LINC02560-201ENST00000596379 HDDC3Q8N4P3 179 aa16.75■□□□□ 0.27
LINC02560-201ENST00000596379 TRIML1Q8N9V2 468 aa16.75■□□□□ 0.27
LINC02560-201ENST00000596379 KDF1Q8NAX2 398 aaPredicted RBP16.75■□□□□ 0.27
LINC02560-201ENST00000596379 P2RY11Q96G91 374 aa16.75■□□□□ 0.27
LINC02560-201ENST00000596379 MRGPRX1Q96LB2 322 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms