RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 TCF3P15923 654 aa20.21■□□□□ 0.83
PNKP-207ENST00000596014 EFEMP1Q12805 493 aa20.21■□□□□ 0.83
PNKP-207ENST00000596014 ZNF77Q15935 545 aa20.21■□□□□ 0.83
PNKP-207ENST00000596014 EFHC1Q5JVL4 640 aa20.21■□□□□ 0.83
PNKP-207ENST00000596014 TOGARAM2Q6ZUX3 1019 aa20.21■□□□□ 0.83
PNKP-207ENST00000596014 XYLT1Q86Y38 959 aa20.21■□□□□ 0.83
PNKP-207ENST00000596014 PHF13Q86YI8 300 aaPredicted RBP20.21■□□□□ 0.83
PNKP-207ENST00000596014 CNGA4Q8IV77 575 aa20.21■□□□□ 0.83
PNKP-207ENST00000596014 TTC16Q8NEE8 873 aa20.21■□□□□ 0.83
PNKP-207ENST00000596014 KHSRPQ92945 711 aaKnown RBP eCLIP20.21■□□□□ 0.83
PNKP-207ENST00000596014 TRMT61BQ9BVS5 477 aaKnown RBP20.21■□□□□ 0.83
PNKP-207ENST00000596014 KLF16Q9BXK1 252 aaPredicted RBP20.21■□□□□ 0.83
PNKP-207ENST00000596014 ARHGAP20Q9P2F6 1191 aa20.21■□□□□ 0.83
PNKP-207ENST00000596014 AKR1B15C9JRZ8 316 aaPredicted RBP20.2■□□□□ 0.82
PNKP-207ENST00000596014 DDX3XO00571 662 aaKnown RBP eCLIP20.2■□□□□ 0.82
PNKP-207ENST00000596014 GLI1P08151 1106 aa20.2■□□□□ 0.82
PNKP-207ENST00000596014 TSR1Q2NL82 804 aaKnown RBP20.2■□□□□ 0.82
PNKP-207ENST00000596014 ACAD10Q6JQN1 1059 aa20.2■□□□□ 0.82
PNKP-207ENST00000596014 BEND5Q7L4P6 421 aa20.2■□□□□ 0.82
PNKP-207ENST00000596014 MIB1Q86YT6 1006 aa20.2■□□□□ 0.82
PNKP-207ENST00000596014 C11orf70Q9BRQ4 267 aa20.2■□□□□ 0.82
PNKP-207ENST00000596014 TRIM62Q9BVG3 475 aa20.2■□□□□ 0.82
PNKP-207ENST00000596014 POPDC2Q9HBU9 364 aa20.2■□□□□ 0.82
PNKP-207ENST00000596014 OLA1Q9NTK5 396 aaKnown RBP20.2■□□□□ 0.82
PNKP-207ENST00000596014 ASNSD1Q9NWL6 643 aa20.2■□□□□ 0.82
PNKP-207ENST00000596014 ADAM22Q9P0K1 906 aa20.2■□□□□ 0.82
PNKP-207ENST00000596014 NAALADL1Q9UQQ1 740 aa20.2■□□□□ 0.82
PNKP-207ENST00000596014 NCAM1P13591 858 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 GDI1P31150 447 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 GPC5P78333 572 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 PTP4A2Q12974 167 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 USP4Q13107 963 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 MTF1Q14872 753 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 SLC26A9Q7LBE3 791 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 YAF2Q8IY57 180 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 ZNHIT6Q9NWK9 470 aaKnown RBP20.19■□□□□ 0.82
PNKP-207ENST00000596014 THG1LQ9NWX6 298 aaKnown RBP20.19■□□□□ 0.82
PNKP-207ENST00000596014 TAS2R14Q9NYV8 317 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 MARCH2Q9P0N8 246 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 CFAP97Q9P2B7 532 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 ADAMTS1Q9UHI8 967 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 RASAL2Q9UJF2 1139 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 DUSP12Q9UNI6 340 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 TMCO5BA8MYB1 307 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 CAPN9O14815 690 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 HSF2BPO75031 334 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 GRAP2O75791 330 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 SRFP11831 508 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 GZMAP12544 262 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 ARHGAP29Q52LW3 1261 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 SYPL2Q5VXT5 272 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 MSANTD2Q6P1R3 559 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 VPS36Q86VN1 386 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 DDX42Q86XP3 938 aaKnown RBP eCLIP20.19■□□□□ 0.82
PNKP-207ENST00000596014 UBALD2Q8IYN6 164 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 TC2NQ8N9U0 490 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.19■□□□□ 0.82
PNKP-207ENST00000596014 SFMBT1Q9UHJ3 866 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 KIF26AQ9ULI4 1882 aaPredicted RBP20.19■□□□□ 0.82
PNKP-207ENST00000596014 STRIP2Q9ULQ0 834 aa20.19■□□□□ 0.82
PNKP-207ENST00000596014 ZNF263O14978 683 aa20.18■□□□□ 0.82
PNKP-207ENST00000596014 CHADO15335 359 aa20.18■□□□□ 0.82
PNKP-207ENST00000596014 SCNN1AP37088 669 aa20.18■□□□□ 0.82
PNKP-207ENST00000596014 COG7P83436 770 aa20.18■□□□□ 0.82
PNKP-207ENST00000596014 C1QBPQ07021 282 aaKnown RBP20.18■□□□□ 0.82
PNKP-207ENST00000596014 FAM102AQ5T9C2 384 aaPredicted RBP20.18■□□□□ 0.82
PNKP-207ENST00000596014 PPP1R2P3Q6NXS1 205 aa20.18■□□□□ 0.82
PNKP-207ENST00000596014 CC2D1AQ6P1N0 951 aaPredicted RBP20.18■□□□□ 0.82
PNKP-207ENST00000596014 MON1BQ7L1V2 547 aa20.18■□□□□ 0.82
PNKP-207ENST00000596014 DEFB106AQ8N104 65 aa20.18■□□□□ 0.82
PNKP-207ENST00000596014 ZFYVE19Q96K21 471 aa20.18■□□□□ 0.82
PNKP-207ENST00000596014 SLC2A13Q96QE2 648 aa20.18■□□□□ 0.82
PNKP-207ENST00000596014 BRD9Q9H8M2 597 aa20.18■□□□□ 0.82
PNKP-207ENST00000596014 SLC2A4RGQ9NR83 387 aa20.18■□□□□ 0.82
PNKP-207ENST00000596014 GOLGA8SH3BPF8 625 aa20.17■□□□□ 0.82
PNKP-207ENST00000596014 DCXO43602 365 aa20.17■□□□□ 0.82
PNKP-207ENST00000596014 CALB1P05937 261 aa20.17■□□□□ 0.82
PNKP-207ENST00000596014 DCAF6Q58WW2 860 aa20.17■□□□□ 0.82
PNKP-207ENST00000596014 PHLDB2Q86SQ0 1253 aa20.17■□□□□ 0.82
PNKP-207ENST00000596014 IRF7Q92985 503 aa20.17■□□□□ 0.82
PNKP-207ENST00000596014 WBP2Q969T9 261 aa20.17■□□□□ 0.82
PNKP-207ENST00000596014 FAM83CQ9BQN1 747 aa20.17■□□□□ 0.82
PNKP-207ENST00000596014 WDR35Q9P2L0 1181 aa20.17■□□□□ 0.82
PNKP-207ENST00000596014 A0A087X0T9 212 aa20.16■□□□□ 0.82
PNKP-207ENST00000596014 SLC12A8A0AV02 714 aa20.16■□□□□ 0.82
PNKP-207ENST00000596014 E2F8A0AVK6 867 aa20.16■□□□□ 0.82
PNKP-207ENST00000596014 TNFRSF10AO00220 468 aa20.16■□□□□ 0.82
PNKP-207ENST00000596014 FTLP02792 175 aaPredicted RBP20.16■□□□□ 0.82
PNKP-207ENST00000596014 FAM228BP0C875 321 aa20.16■□□□□ 0.82
PNKP-207ENST00000596014 IRF1P10914 325 aa20.16■□□□□ 0.82
PNKP-207ENST00000596014 EIF4A3P38919 411 aaKnown RBP20.16■□□□□ 0.82
PNKP-207ENST00000596014 RNASE9P60153 205 aaKnown RBP20.16■□□□□ 0.82
PNKP-207ENST00000596014 ZXDAP98168 799 aa20.16■□□□□ 0.82
PNKP-207ENST00000596014 MCOLN2Q8IZK6 566 aa20.16■□□□□ 0.82
PNKP-207ENST00000596014 KIAA1958Q8N8K9 716 aa20.16■□□□□ 0.82
PNKP-207ENST00000596014 DQX1Q8TE96 717 aaKnown RBP20.16■□□□□ 0.82
PNKP-207ENST00000596014 VCPIP1Q96JH7 1222 aa20.16■□□□□ 0.82
PNKP-207ENST00000596014 ZNF830Q96NB3 372 aaPredicted RBP20.16■□□□□ 0.82
PNKP-207ENST00000596014 CHP1Q99653 195 aa20.16■□□□□ 0.82
PNKP-207ENST00000596014 KCNF1Q9H3M0 494 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms