RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 ACOX2Q99424 681 aa17.92■□□□□ 0.46
CCDC9-202ENST00000595659 TSG101Q99816 390 aa17.92■□□□□ 0.46
CCDC9-202ENST00000595659 DUSP9Q99956 384 aaKnown RBP17.92■□□□□ 0.46
CCDC9-202ENST00000595659 DNAI2Q9GZS0 605 aa17.92■□□□□ 0.46
CCDC9-202ENST00000595659 RASAL2Q9UJF2 1139 aa17.92■□□□□ 0.46
CCDC9-202ENST00000595659 USP3Q9Y6I4 520 aa17.92■□□□□ 0.46
CCDC9-202ENST00000595659 NCOR2Q9Y618 2525 aa17.92■□□□□ 0.46
CCDC9-202ENST00000595659 TM4SF5O14894 197 aa17.91■□□□□ 0.46
CCDC9-202ENST00000595659 KLKB1P03952 638 aa17.91■□□□□ 0.46
CCDC9-202ENST00000595659 ADRB1P08588 477 aa17.91■□□□□ 0.46
CCDC9-202ENST00000595659 RALAP11233 206 aa17.91■□□□□ 0.46
CCDC9-202ENST00000595659 LIMK1P53667 647 aa17.91■□□□□ 0.46
CCDC9-202ENST00000595659 MCCD1P59942 119 aaPredicted RBP17.91■□□□□ 0.46
CCDC9-202ENST00000595659 EFEMP1Q12805 493 aa17.91■□□□□ 0.46
CCDC9-202ENST00000595659 LRMPQ12912 555 aa17.91■□□□□ 0.46
CCDC9-202ENST00000595659 HSF5Q4G112 596 aaPredicted RBP17.91■□□□□ 0.46
CCDC9-202ENST00000595659 EGFLAMQ63HQ2 1017 aa17.91■□□□□ 0.46
CCDC9-202ENST00000595659 CCDC186Q7Z3E2 898 aa17.91■□□□□ 0.46
CCDC9-202ENST00000595659 CYP2U1Q7Z449 544 aa17.91■□□□□ 0.46
CCDC9-202ENST00000595659 PIGZQ86VD9 579 aa17.91■□□□□ 0.46
CCDC9-202ENST00000595659 DEFB119Q8N690 84 aa17.91■□□□□ 0.46
CCDC9-202ENST00000595659 NDRG1Q92597 394 aaKnown RBP17.91■□□□□ 0.46
CCDC9-202ENST00000595659 PIGKQ92643 395 aa17.91■□□□□ 0.46
CCDC9-202ENST00000595659 SMARCE1Q969G3 411 aa17.91■□□□□ 0.46
CCDC9-202ENST00000595659 XPO6Q96QU8 1125 aaKnown RBP17.91■□□□□ 0.46
CCDC9-202ENST00000595659 EDEM2Q9BV94 578 aa17.91■□□□□ 0.46
CCDC9-202ENST00000595659 WDR35Q9P2L0 1181 aa17.91■□□□□ 0.46
CCDC9-202ENST00000595659 MBD1Q9UIS9 605 aaPredicted RBP17.91■□□□□ 0.46
CCDC9-202ENST00000595659 HELZP42694 1942 aaKnown RBP17.91■□□□□ 0.46
CCDC9-202ENST00000595659 SDK1Q7Z5N4 2213 aa17.91■□□□□ 0.46
CCDC9-202ENST00000595659 C4orf47A7E2U8 309 aa17.9■□□□□ 0.46
CCDC9-202ENST00000595659 PRRT4C9JH25 899 aa17.9■□□□□ 0.46
CCDC9-202ENST00000595659 TULP2O00295 520 aa17.9■□□□□ 0.46
CCDC9-202ENST00000595659 STC2O76061 302 aa17.9■□□□□ 0.46
CCDC9-202ENST00000595659 SMC2O95347 1197 aa17.9■□□□□ 0.46
CCDC9-202ENST00000595659 HOXB2P14652 356 aa17.9■□□□□ 0.46
CCDC9-202ENST00000595659 P2RY2P41231 377 aa17.9■□□□□ 0.46
CCDC9-202ENST00000595659 MAP7D1Q3KQU3 841 aa17.9■□□□□ 0.46
CCDC9-202ENST00000595659 PREPLQ4J6C6 727 aaPredicted RBP17.9■□□□□ 0.46
CCDC9-202ENST00000595659 KLHDC10Q6PID8 442 aa17.9■□□□□ 0.46
CCDC9-202ENST00000595659 Q6ZNB5 142 aa17.9■□□□□ 0.46
CCDC9-202ENST00000595659 NUDT18Q6ZVK8 323 aa17.9■□□□□ 0.46
CCDC9-202ENST00000595659 C11orf74Q86VG3 221 aa17.9■□□□□ 0.46
CCDC9-202ENST00000595659 GSDMAQ96QA5 445 aa17.9■□□□□ 0.46
CCDC9-202ENST00000595659 KHNYNO15037 678 aaKnown RBP17.89■□□□□ 0.45
CCDC9-202ENST00000595659 SLC16A3O15427 465 aaKnown RBP17.89■□□□□ 0.45
CCDC9-202ENST00000595659 CACNG3O60359 315 aa17.89■□□□□ 0.45
CCDC9-202ENST00000595659 NTSR1P30989 418 aa17.89■□□□□ 0.45
CCDC9-202ENST00000595659 PTGER3P43115 390 aa17.89■□□□□ 0.45
CCDC9-202ENST00000595659 PSEN1P49768 467 aa17.89■□□□□ 0.45
CCDC9-202ENST00000595659 FKBP3Q00688 224 aaKnown RBP17.89■□□□□ 0.45
CCDC9-202ENST00000595659 CUL2Q13617 745 aa17.89■□□□□ 0.45
CCDC9-202ENST00000595659 BECN1Q14457 450 aa17.89■□□□□ 0.45
CCDC9-202ENST00000595659 GOLGA7BQ2TAP0 167 aa17.89■□□□□ 0.45
CCDC9-202ENST00000595659 ARHGAP17Q68EM7 881 aa17.89■□□□□ 0.45
CCDC9-202ENST00000595659 TADA2BQ86TJ2 420 aa17.89■□□□□ 0.45
CCDC9-202ENST00000595659 CHPFQ8IZ52 775 aa17.89■□□□□ 0.45
CCDC9-202ENST00000595659 TTC39CQ8N584 583 aa17.89■□□□□ 0.45
CCDC9-202ENST00000595659 SPACA7Q96KW9 195 aa17.89■□□□□ 0.45
CCDC9-202ENST00000595659 CLIC5Q9NZA1 410 aa17.89■□□□□ 0.45
CCDC9-202ENST00000595659 MARK1Q9P0L2 795 aa17.89■□□□□ 0.45
CCDC9-202ENST00000595659 ARMCX3Q9UH62 379 aaPredicted RBP17.89■□□□□ 0.45
CCDC9-202ENST00000595659 RAD54BQ9Y620 910 aa17.89■□□□□ 0.45
CCDC9-202ENST00000595659 A0A1W2PQF6 199 aa17.88■□□□□ 0.45
CCDC9-202ENST00000595659 LNP1A1A4G5 178 aa17.88■□□□□ 0.45
CCDC9-202ENST00000595659 CISD3P0C7P0 127 aa17.88■□□□□ 0.45
CCDC9-202ENST00000595659 CD19P15391 556 aa17.88■□□□□ 0.45
CCDC9-202ENST00000595659 CD44P16070 742 aaKnown RBP17.88■□□□□ 0.45
CCDC9-202ENST00000595659 GABRG2P18507 467 aa17.88■□□□□ 0.45
CCDC9-202ENST00000595659 CORO1AP31146 461 aaKnown RBP17.88■□□□□ 0.45
CCDC9-202ENST00000595659 DGKGP49619 791 aa17.88■□□□□ 0.45
CCDC9-202ENST00000595659 TKTL1P51854 596 aa17.88■□□□□ 0.45
CCDC9-202ENST00000595659 IRX4P78413 519 aa17.88■□□□□ 0.45
CCDC9-202ENST00000595659 N4BP2L1Q5TBK1 243 aaPredicted RBP17.88■□□□□ 0.45
CCDC9-202ENST00000595659 KIAA1211LQ6NV74 962 aa17.88■□□□□ 0.45
CCDC9-202ENST00000595659 RSRC2Q7L4I2 434 aaKnown RBP17.88■□□□□ 0.45
CCDC9-202ENST00000595659 LPCAT2Q7L5N7 544 aa17.88■□□□□ 0.45
CCDC9-202ENST00000595659 TRMT11Q7Z4G4 463 aaKnown RBP17.88■□□□□ 0.45
CCDC9-202ENST00000595659 ZC3H3Q8IXZ2 948 aaKnown RBP17.88■□□□□ 0.45
CCDC9-202ENST00000595659 ANKRD52Q8NB46 1076 aa17.88■□□□□ 0.45
CCDC9-202ENST00000595659 UBA3Q8TBC4 463 aa17.88■□□□□ 0.45
CCDC9-202ENST00000595659 KCNV2Q8TDN2 545 aa17.88■□□□□ 0.45
CCDC9-202ENST00000595659 DDX1Q92499 740 aaKnown RBP17.88■□□□□ 0.45
CCDC9-202ENST00000595659 ULBP1Q9BZM6 244 aa17.88■□□□□ 0.45
CCDC9-202ENST00000595659 SLC6A17Q9H1V8 727 aa17.88■□□□□ 0.45
CCDC9-202ENST00000595659 CACNA2D2Q9NY47 1150 aa17.88■□□□□ 0.45
CCDC9-202ENST00000595659 MARCH2Q9P0N8 246 aa17.88■□□□□ 0.45
CCDC9-202ENST00000595659 CALCOCO1Q9P1Z2 691 aa17.88■□□□□ 0.45
CCDC9-202ENST00000595659 TSPAN16Q9UKR8 245 aa17.88■□□□□ 0.45
CCDC9-202ENST00000595659 STARD13Q9Y3M8 1113 aa17.88■□□□□ 0.45
CCDC9-202ENST00000595659 SLC12A8A0AV02 714 aa17.87■□□□□ 0.45
CCDC9-202ENST00000595659 WASH3PC4AMC7 463 aa17.87■□□□□ 0.45
CCDC9-202ENST00000595659 YWHAGP61981 247 aaKnown RBP eCLIP17.87■□□□□ 0.45
CCDC9-202ENST00000595659 NUCB2P80303 420 aa17.87■□□□□ 0.45
CCDC9-202ENST00000595659 COG7P83436 770 aa17.87■□□□□ 0.45
CCDC9-202ENST00000595659 PDE4CQ08493 712 aa17.87■□□□□ 0.45
CCDC9-202ENST00000595659 COBLL1Q53SF7 1204 aa17.87■□□□□ 0.45
CCDC9-202ENST00000595659 RAB41Q5JT25 222 aa17.87■□□□□ 0.45
CCDC9-202ENST00000595659 SDE2Q6IQ49 451 aa17.87■□□□□ 0.45
CCDC9-202ENST00000595659 KLHL10Q6JEL2 608 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms