RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 EIF3CLB5ME19 914 aaKnown RBP23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 CKMP06732 381 aa23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 FCARP24071 287 aa23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 CYLC1P35663 651 aaPredicted RBP23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 MAMLD1Q13495 774 aa23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 MSANTD2Q6P1R3 559 aa23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 RSRC2Q7L4I2 434 aaKnown RBP23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 TDRD5Q8NAT2 981 aaKnown RBP23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 ST13P5Q8NFI4 369 aaPredicted RBP23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 USP13Q92995 863 aaPredicted RBP23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 ZNF653Q96CK0 615 aa23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 TRIM11Q96F44 468 aa23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 ZFRQ96KR1 1074 aaKnown RBP23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 EIF3CQ99613 913 aaKnown RBP23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 TRIM62Q9BVG3 475 aa23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 OLA1Q9NTK5 396 aaKnown RBP23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 CNOT8Q9UFF9 292 aaKnown RBP23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 DNMT3LQ9UJW3 386 aa23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 CCL26Q9Y258 94 aa23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 LOC730098B7Z3J9 87 aa23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 DAB1O75553 588 aa23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 MYBL1P10243 752 aa23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 KRT3P12035 628 aa23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 FLT3P36888 993 aa23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 DCAF6Q58WW2 860 aa23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 TADA2BQ86TJ2 420 aa23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 JOSD2Q8TAC2 188 aa23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 RNF139Q8WU17 664 aa23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 TDP1Q9NUW8 608 aa23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 PRKAG3Q9UGI9 489 aa23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 CAPN9O14815 690 aa23.56■■□□□ 1.36
SNRNP70-204ENST00000595231 MBL2P11226 248 aaPredicted RBP23.56■■□□□ 1.36
SNRNP70-204ENST00000595231 NOS2P35228 1153 aa23.56■■□□□ 1.36
SNRNP70-204ENST00000595231 RFC1P35251 1148 aaPredicted RBP23.56■■□□□ 1.36
SNRNP70-204ENST00000595231 VIPR2P41587 438 aa23.56■■□□□ 1.36
SNRNP70-204ENST00000595231 MATKP42679 507 aa23.56■■□□□ 1.36
SNRNP70-204ENST00000595231 RPL7AP62424 266 aaKnown RBP23.56■■□□□ 1.36
SNRNP70-204ENST00000595231 PITX1P78337 314 aaPredicted RBP23.56■■□□□ 1.36
SNRNP70-204ENST00000595231 EFEMP1Q12805 493 aa23.56■■□□□ 1.36
SNRNP70-204ENST00000595231 DNAJC24Q6P3W2 148 aa23.56■■□□□ 1.36
SNRNP70-204ENST00000595231 PARM1Q6UWI2 310 aa23.56■■□□□ 1.36
SNRNP70-204ENST00000595231 ADHFE1Q8IWW8 467 aa23.56■■□□□ 1.36
SNRNP70-204ENST00000595231 ZDHHC14Q8IZN3 488 aa23.56■■□□□ 1.36
SNRNP70-204ENST00000595231 EMC1Q8N766 993 aa23.56■■□□□ 1.36
SNRNP70-204ENST00000595231 FGF14Q92915 247 aa23.56■■□□□ 1.36
SNRNP70-204ENST00000595231 RSPRY1Q96DX4 576 aa23.56■■□□□ 1.36
SNRNP70-204ENST00000595231 SELENOOQ9BVL4 669 aa23.56■■□□□ 1.36
SNRNP70-204ENST00000595231 PARVAQ9NVD7 372 aa23.56■■□□□ 1.36
SNRNP70-204ENST00000595231 SFMBT1Q9UHJ3 866 aa23.56■■□□□ 1.36
SNRNP70-204ENST00000595231 ARHGAP26Q9UNA1 814 aa23.56■■□□□ 1.36
SNRNP70-204ENST00000595231 TCF20Q9UGU0 1960 aaKnown RBP23.56■■□□□ 1.36
SNRNP70-204ENST00000595231 ANHXE9PGG2 379 aa23.55■■□□□ 1.36
SNRNP70-204ENST00000595231 H2AFZP0C0S5 128 aa23.55■■□□□ 1.36
SNRNP70-204ENST00000595231 GPC5P78333 572 aa23.55■■□□□ 1.36
SNRNP70-204ENST00000595231 ZP2Q05996 745 aa23.55■■□□□ 1.36
SNRNP70-204ENST00000595231 C10orf76Q5T2E6 689 aa23.55■■□□□ 1.36
SNRNP70-204ENST00000595231 TANGO2Q6ICL3 276 aa23.55■■□□□ 1.36
SNRNP70-204ENST00000595231 H2AFVQ71UI9 128 aa23.55■■□□□ 1.36
SNRNP70-204ENST00000595231 PLCD3Q8N3E9 789 aa23.55■■□□□ 1.36
SNRNP70-204ENST00000595231 ADAMTS19Q8TE59 1207 aa23.55■■□□□ 1.36
SNRNP70-204ENST00000595231 DQX1Q8TE96 717 aaKnown RBP23.55■■□□□ 1.36
SNRNP70-204ENST00000595231 NT5C3BQ969T7 300 aa23.55■■□□□ 1.36
SNRNP70-204ENST00000595231 ARHGEF26Q96DR7 871 aa23.55■■□□□ 1.36
SNRNP70-204ENST00000595231 LRRC3BQ96PB8 259 aa23.55■■□□□ 1.36
SNRNP70-204ENST00000595231 DDX23Q9BUQ8 820 aaKnown RBP23.55■■□□□ 1.36
SNRNP70-204ENST00000595231 KLF16Q9BXK1 252 aaPredicted RBP23.55■■□□□ 1.36
SNRNP70-204ENST00000595231 ADAM33Q9BZ11 813 aa23.55■■□□□ 1.36
SNRNP70-204ENST00000595231 NACA2Q9H009 215 aa23.55■■□□□ 1.36
SNRNP70-204ENST00000595231 GKN1Q9NS71 199 aa23.55■■□□□ 1.36
SNRNP70-204ENST00000595231 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.55■■□□□ 1.364e-8■□□□□ 9.6
SNRNP70-204ENST00000595231 MARCH2Q9P0N8 246 aa23.55■■□□□ 1.36
SNRNP70-204ENST00000595231 MYO1AQ9UBC5 1043 aa23.55■■□□□ 1.36
SNRNP70-204ENST00000595231 CPQQ9Y646 472 aa23.55■■□□□ 1.36
SNRNP70-204ENST00000595231 HELZP42694 1942 aaKnown RBP23.55■■□□□ 1.36
SNRNP70-204ENST00000595231 C2CD4BA6NLJ0 364 aa23.54■■□□□ 1.36
SNRNP70-204ENST00000595231 CYP1A2P05177 515 aa23.54■■□□□ 1.36
SNRNP70-204ENST00000595231 CCZ1BP86790 482 aa23.54■■□□□ 1.36
SNRNP70-204ENST00000595231 CCZ1P86791 482 aaPredicted RBP23.54■■□□□ 1.36
SNRNP70-204ENST00000595231 MIB1Q86YT6 1006 aa23.54■■□□□ 1.36
SNRNP70-204ENST00000595231 CCDC112Q8NEF3 446 aa23.54■■□□□ 1.36
SNRNP70-204ENST00000595231 RIN3Q8TB24 985 aa23.54■■□□□ 1.36
SNRNP70-204ENST00000595231 PPP1R9BQ96SB3 815 aa23.54■■□□□ 1.36
SNRNP70-204ENST00000595231 SMOC2Q9H3U7 446 aa23.54■■□□□ 1.36
SNRNP70-204ENST00000595231 SMPD4Q9NXE4 827 aa23.54■■□□□ 1.36
SNRNP70-204ENST00000595231 REXO2Q9Y3B8 237 aaKnown RBP23.54■■□□□ 1.36
SNRNP70-204ENST00000595231 IGLV3-25P01717 112 aa23.54■■□□□ 1.36
SNRNP70-204ENST00000595231 EIF4EBP2Q13542 120 aaPredicted RBP23.54■■□□□ 1.36
SNRNP70-204ENST00000595231 MCEEQ96PE7 176 aa23.54■■□□□ 1.36
SNRNP70-204ENST00000595231 NPY6RQ99463 290 aa23.54■■□□□ 1.36
SNRNP70-204ENST00000595231 RPP25Q9BUL9 199 aaKnown RBP23.54■■□□□ 1.36
SNRNP70-204ENST00000595231 ZFP14Q9HCL3 533 aa23.54■■□□□ 1.36
SNRNP70-204ENST00000595231 CALCOCO1Q9P1Z2 691 aa23.54■■□□□ 1.36
SNRNP70-204ENST00000595231 LIMD1Q9UGP4 676 aa23.54■■□□□ 1.36
SNRNP70-204ENST00000595231 RASAL2Q9UJF2 1139 aa23.54■■□□□ 1.36
SNRNP70-204ENST00000595231 PCDHA13Q9Y5I0 950 aa23.54■■□□□ 1.36
SNRNP70-204ENST00000595231 TMEM253P0C7T8 217 aa23.53■■□□□ 1.36
SNRNP70-204ENST00000595231 TFE3P19532 575 aaPredicted RBP23.53■■□□□ 1.36
SNRNP70-204ENST00000595231 MAGEA1P43355 309 aa23.53■■□□□ 1.36
SNRNP70-204ENST00000595231 HTR4Q13639 388 aa23.53■■□□□ 1.36
SNRNP70-204ENST00000595231 SPA17Q15506 151 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms